RNA–Protein interactions for RNA: YMR128W

ECM16, Transcript of Essential DEAH-box ATP-dependent RNA helicase specific to U3 snoRNP, yeastyeast

Gene ECM16, Length 3,804 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM16YMR128W RPB11P38902 120 aa3.14□□□□□ -1.91
ECM16YMR128W YOL029CQ08187 201 aa3.14□□□□□ -1.91
ECM16YMR128W YOR376WQ08900 122 aa3.14□□□□□ -1.91
ECM16YMR128W ATG40Q99325 256 aa3.14□□□□□ -1.91
ECM16YMR128W ROX3P25046 220 aa3.14□□□□□ -1.91
ECM16YMR128W QRI5P32344 111 aa3.14□□□□□ -1.91
ECM16YMR128W BRP1P53194 125 aa3.14□□□□□ -1.91
ECM16YMR128W SEN1Q00416 2231 aaKnown RBP3.13□□□□□ -1.91
ECM16YMR128W MBF1O14467 151 aaKnown RBP3.13□□□□□ -1.91
ECM16YMR128W RPP2AP05319 106 aaKnown RBP3.13□□□□□ -1.91
ECM16YMR128W YGL230CP53074 147 aa3.13□□□□□ -1.91
ECM16YMR128W SDS23P53172 527 aa3.13□□□□□ -1.91
ECM16YMR128W YHR214C-DP0CX93 97 aa3.13□□□□□ -1.91
ECM16YMR128W SAS2P40963 338 aa3.13□□□□□ -1.91
ECM16YMR128W HAC1P41546 238 aa3.13□□□□□ -1.91
ECM16YMR128W BOR1P53838 576 aa3.13□□□□□ -1.91
ECM16YMR128W HSK3P69852 69 aa3.13□□□□□ -1.91
ECM16YMR128W YMR254CQ04838 102 aa3.13□□□□□ -1.91
ECM16YMR128W YPR098CQ06089 161 aa3.13□□□□□ -1.91
ECM16YMR128W YOX1P34161 385 aa3.13□□□□□ -1.91
ECM16YMR128W MIC27P50945 234 aa3.13□□□□□ -1.91
ECM16YMR128W SSU72P53538 206 aaPredicted RBP3.13□□□□□ -1.91
ECM16YMR128W YPL162CQ12042 273 aa3.13□□□□□ -1.91
ECM16YMR128W YOR029WQ12243 111 aa3.13□□□□□ -1.91
ECM16YMR128W SAL1D6W196 494 aa3.12□□□□□ -1.91
ECM16YMR128W CPR1P14832 162 aaKnown RBP3.12□□□□□ -1.91
ECM16YMR128W PRE1P22141 198 aaKnown RBP3.12□□□□□ -1.91
ECM16YMR128W PRY2P36110 329 aa3.12□□□□□ -1.91
ECM16YMR128W CYB5P40312 120 aa3.12□□□□□ -1.91
ECM16YMR128W MIC26P50087 233 aa3.12□□□□□ -1.91
ECM16YMR128W HNT3Q08702 217 aa3.12□□□□□ -1.91
ECM16YMR128W RPF1P38805 295 aaKnown RBP3.12□□□□□ -1.91
ECM16YMR128W YER084WP40057 128 aa3.12□□□□□ -1.91
ECM16YMR128W YTH1Q06102 208 aaPredicted RBP3.12□□□□□ -1.91
ECM16YMR128W RPL23AP0CX41 137 aaKnown RBP3.12□□□□□ -1.91
ECM16YMR128W RPL23BP0CX42 137 aaKnown RBP3.12□□□□□ -1.91
ECM16YMR128W YER190C-BP0CX94 160 aa3.12□□□□□ -1.91
ECM16YMR128W YEL077W-AP0CX95 160 aa3.12□□□□□ -1.91
ECM16YMR128W YGR296C-BP0CX96 160 aa3.12□□□□□ -1.91
ECM16YMR128W YPL283W-BP0CX97 160 aa3.12□□□□□ -1.91
ECM16YMR128W YPR204C-AP0CX98 160 aa3.12□□□□□ -1.91
ECM16YMR128W RAD23P32628 398 aaKnown RBP3.12□□□□□ -1.91
ECM16YMR128W AIM29P36154 155 aa3.12□□□□□ -1.91
ECM16YMR128W SFT2P38166 215 aa3.12□□□□□ -1.91
ECM16YMR128W YNL198CP40166 100 aa3.12□□□□□ -1.91
ECM16YMR128W GON7P46984 123 aa3.12□□□□□ -1.91
ECM16YMR128W FSF1Q12029 327 aaKnown RBP3.12□□□□□ -1.91
ECM16YMR128W RNH203Q12338 110 aa3.12□□□□□ -1.91
ECM16YMR128W YPR117WQ06116 2489 aa3.11□□□□□ -1.91
ECM16YMR128W LSM2P38203 95 aaKnown RBP3.11□□□□□ -1.91
ECM16YMR128W EGT2P42835 1041 aa3.11□□□□□ -1.91
ECM16YMR128W YLR050CQ12155 161 aaKnown RBP3.11□□□□□ -1.91
ECM16YMR128W YPS3Q12303 508 aa3.11□□□□□ -1.91
ECM16YMR128W UTP23Q12339 254 aaKnown RBP3.11□□□□□ -1.91
ECM16YMR128W YKR070WP36151 352 aaKnown RBP3.11□□□□□ -1.91
ECM16YMR128W PRM5P40476 318 aa3.11□□□□□ -1.91
ECM16YMR128W YIL029CP40538 142 aa3.11□□□□□ -1.91
ECM16YMR128W MSL1P40567 111 aaPredicted RBP3.11□□□□□ -1.91
ECM16YMR128W HRD1Q08109 551 aa3.11□□□□□ -1.91
ECM16YMR128W RFM1Q12192 310 aa3.11□□□□□ -1.91
ECM16YMR128W YOS1Q3E834 85 aa3.11□□□□□ -1.91
ECM16YMR128W CDC43P18898 376 aa3.11□□□□□ -1.91
ECM16YMR128W PMU1P36069 295 aa3.11□□□□□ -1.91
ECM16YMR128W COX18P53239 316 aa3.11□□□□□ -1.91
ECM16YMR128W POP3P53833 195 aaPredicted RBP3.11□□□□□ -1.91
ECM16YMR128W PRP11Q07350 266 aaPredicted RBP3.11□□□□□ -1.91
ECM16YMR128W DFM1Q12743 341 aaKnown RBP3.11□□□□□ -1.91
ECM16YMR128W YMR141CP40211 102 aa3.1□□□□□ -1.91
ECM16YMR128W YFR045WP43617 309 aa3.1□□□□□ -1.91
ECM16YMR128W PIS1P06197 220 aaKnown RBP3.1□□□□□ -1.91
ECM16YMR128W PET8P38921 284 aa3.1□□□□□ -1.91
ECM16YMR128W FIT2Q08906 153 aa3.1□□□□□ -1.91
ECM16YMR128W RPS22BQ3E7Y3 130 aaKnown RBP3.1□□□□□ -1.91
ECM16YMR128W ECO1P43605 281 aa3.1□□□□□ -1.91
ECM16YMR128W GRH1Q04410 372 aaKnown RBP3.1□□□□□ -1.91
ECM16YMR128W UPS1Q05776 175 aa3.1□□□□□ -1.91
ECM16YMR128W CNL1Q06333 122 aa3.1□□□□□ -1.91
ECM16YMR128W TIM18Q08749 192 aa3.1□□□□□ -1.91
ECM16YMR128W TOM40P23644 387 aaKnown RBP3.09□□□□□ -1.91
ECM16YMR128W YHR138CP38841 114 aaPredicted RBP3.09□□□□□ -1.91
ECM16YMR128W YDR391CQ04170 232 aa3.09□□□□□ -1.91
ECM16YMR128W VPS63O13549 108 aa3.09□□□□□ -1.91
ECM16YMR128W YGP1P38616 354 aaKnown RBP3.09□□□□□ -1.91
ECM16YMR128W LST8P41318 303 aa3.09□□□□□ -1.91
ECM16YMR128W UBC13P52490 153 aa3.09□□□□□ -1.91
ECM16YMR128W ATG39Q06159 398 aa3.09□□□□□ -1.91
ECM16YMR128W YGL258W-AQ3E740 77 aa3.09□□□□□ -1.91
ECM16YMR128W HMRA1P0CY11 126 aa3.09□□□□□ -1.92
ECM16YMR128W MRPL31P14063 131 aaPredicted RBP3.09□□□□□ -1.92
ECM16YMR128W YCR022CP25620 114 aa3.09□□□□□ -1.92
ECM16YMR128W UTH1P36135 365 aa3.09□□□□□ -1.92
ECM16YMR128W YHR173CP38864 112 aa3.09□□□□□ -1.92
ECM16YMR128W YGR017WP53210 297 aa3.09□□□□□ -1.92
ECM16YMR128W YNL184CP53876 108 aa3.09□□□□□ -1.92
ECM16YMR128W GTO3Q04806 366 aa3.09□□□□□ -1.92
ECM16YMR128W DPP1Q05521 289 aa3.09□□□□□ -1.92
ECM16YMR128W DAP1Q12091 152 aa3.09□□□□□ -1.92
ECM16YMR128W WIP1Q2V2P8 89 aa3.09□□□□□ -1.92
ECM16YMR128W YER121WP40076 114 aa3.08□□□□□ -1.92
ECM16YMR128W EOS1P53938 366 aa3.08□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 31.9 ms