RNA–Protein interactions for RNA: YJL140W

RPB4, Transcript of RNA polymerase II subunit B32, yeast

Gene RPB4, Length 666 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPB4	YJL140W	PAA1	Q12447	191 aa	Known RBP	4.05	□□□□□ -1.76
RPB4	YJL140W	ADH3	P07246	375 aa	Known RBP	4.04	□□□□□ -1.76
RPB4	YJL140W	RPS2	P25443	254 aa	Known RBP	4.04	□□□□□ -1.76
RPB4	YJL140W	TRS20	P38334	175 aa		4.04	□□□□□ -1.76
RPB4	YJL140W	PET100	P38958	111 aa		4.04	□□□□□ -1.76
RPB4	YJL140W	NOP16	P40007	231 aa	Known RBP	4.04	□□□□□ -1.76
RPB4	YJL140W	WWM1	P43582	211 aa	Known RBP	4.04	□□□□□ -1.76
RPB4	YJL140W	MIC27	P50945	234 aa		4.04	□□□□□ -1.76
RPB4	YJL140W	YGR018C	P53211	109 aa		4.04	□□□□□ -1.76
RPB4	YJL140W	SSU72	P53538	206 aa	Predicted RBP	4.04	□□□□□ -1.76
RPB4	YJL140W	STD1	Q02794	444 aa		4.04	□□□□□ -1.76
RPB4	YJL140W	RAD28	Q12021	506 aa		4.04	□□□□□ -1.76
RPB4	YJL140W	ATP16	Q12165	160 aa		4.04	□□□□□ -1.76
RPB4	YJL140W	JID1	Q12350	301 aa		4.04	□□□□□ -1.76
RPB4	YJL140W	PIS1	P06197	220 aa	Known RBP	4.03	□□□□□ -1.76
RPB4	YJL140W	SEC59	P20048	519 aa		4.03	□□□□□ -1.76
RPB4	YJL140W	TOM40	P23644	387 aa	Known RBP	4.03	□□□□□ -1.76
RPB4	YJL140W	MIG1	P27705	504 aa		4.03	□□□□□ -1.76
RPB4	YJL140W	ALK2	P32789	676 aa	Predicted RBP	4.03	□□□□□ -1.76
RPB4	YJL140W	MRPS9	P38120	278 aa		4.03	□□□□□ -1.76
RPB4	YJL140W	YBR013C	P38215	129 aa		4.03	□□□□□ -1.76
RPB4	YJL140W	YPT31	P38555	223 aa	Known RBP	4.03	□□□□□ -1.76
RPB4	YJL140W	YIL163C	P40448	117 aa		4.03	□□□□□ -1.76
RPB4	YJL140W	GTT1	P40582	234 aa		4.03	□□□□□ -1.76
RPB4	YJL140W	ATG27	P46989	271 aa		4.03	□□□□□ -1.76
RPB4	YJL140W	FYV6	P53913	173 aa		4.03	□□□□□ -1.76
RPB4	YJL140W	LOA1	Q06508	300 aa		4.03	□□□□□ -1.76
RPB4	YJL140W	ZEO1	Q08245	113 aa		4.03	□□□□□ -1.76
RPB4	YJL140W	YLR118C	Q12354	227 aa		4.03	□□□□□ -1.76
RPB4	YJL140W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.02	□□□□□ -1.77	not detected
RPB4	YJL140W	BGL2	P15703	313 aa	Known RBP	4.02	□□□□□ -1.77
RPB4	YJL140W	PHO85	P17157	305 aa		4.02	□□□□□ -1.77
RPB4	YJL140W	POF1	P25576	258 aa		4.02	□□□□□ -1.77
RPB4	YJL140W	YCR022C	P25620	114 aa		4.02	□□□□□ -1.77
RPB4	YJL140W	PHD1	P36093	366 aa		4.02	□□□□□ -1.77
RPB4	YJL140W	YBL071C	P38185	102 aa		4.02	□□□□□ -1.77
RPB4	YJL140W	YAR068W	P39564	161 aa		4.02	□□□□□ -1.77
RPB4	YJL140W	BDH1	P39714	382 aa		4.02	□□□□□ -1.77
RPB4	YJL140W	PAU15	P40585	124 aa		4.02	□□□□□ -1.77
RPB4	YJL140W	LST7	P53237	242 aa		4.02	□□□□□ -1.77
RPB4	YJL140W	ATC1	Q04005	294 aa		4.02	□□□□□ -1.77
RPB4	YJL140W	LDS2	Q08218	356 aa		4.02	□□□□□ -1.77
RPB4	YJL140W	IRC23	Q08416	157 aa		4.02	□□□□□ -1.77
RPB4	YJL140W	RAD23	P32628	398 aa	Known RBP	4.01	□□□□□ -1.77
RPB4	YJL140W	YBR090C	P38253	122 aa		4.01	□□□□□ -1.77
RPB4	YJL140W	HUA1	P40325	198 aa		4.01	□□□□□ -1.77
RPB4	YJL140W	YIP1	P53039	248 aa		4.01	□□□□□ -1.77
RPB4	YJL140W	MGA1	P53050	456 aa		4.01	□□□□□ -1.77
RPB4	YJL140W	VPS71	Q03433	280 aa		4.01	□□□□□ -1.77
RPB4	YJL140W	NAT3	Q06504	195 aa		4.01	□□□□□ -1.77
RPB4	YJL140W	CDC7	P06243	507 aa		4	□□□□□ -1.77
RPB4	YJL140W	PET494	P07390	489 aa	Predicted RBP	4	□□□□□ -1.77
RPB4	YJL140W	RNA15	P25299	296 aa	Predicted RBP	4	□□□□□ -1.77
RPB4	YJL140W	YPS1	P32329	569 aa		4	□□□□□ -1.77
RPB4	YJL140W	HMX1	P32339	317 aa		4	□□□□□ -1.77
RPB4	YJL140W	AVT5	P38176	459 aa		4	□□□□□ -1.77
RPB4	YJL140W	LSM2	P38203	95 aa	Known RBP	4	□□□□□ -1.77
RPB4	YJL140W	RAV2	Q03956	351 aa		4	□□□□□ -1.77
RPB4	YJL140W	YLR302C	O13544	120 aa		3.99	□□□□□ -1.77
RPB4	YJL140W	RPS22A	P0C0W1	130 aa	Known RBP	3.99	□□□□□ -1.77
RPB4	YJL140W	MRPL38	P35996	138 aa	Predicted RBP	3.99	□□□□□ -1.77
RPB4	YJL140W	DOG2	P38773	246 aa		3.99	□□□□□ -1.77
RPB4	YJL140W	DOG1	P38774	246 aa		3.99	□□□□□ -1.77
RPB4	YJL140W	SRP14	P38985	146 aa		3.99	□□□□□ -1.77
RPB4	YJL140W	SNU13	P39990	126 aa	Known RBP	3.99	□□□□□ -1.77
RPB4	YJL140W	SAS2	P40963	338 aa		3.99	□□□□□ -1.77
RPB4	YJL140W	RPA43	P46669	326 aa		3.99	□□□□□ -1.77
RPB4	YJL140W	GPI2	P46961	280 aa		3.99	□□□□□ -1.77
RPB4	YJL140W	HST4	P53688	370 aa		3.99	□□□□□ -1.77
RPB4	YJL140W	DAD3	P69850	94 aa		3.99	□□□□□ -1.77
RPB4	YJL140W	SPG4	Q04438	115 aa		3.99	□□□□□ -1.77
RPB4	YJL140W	SCW10	Q04951	389 aa		3.99	□□□□□ -1.77
RPB4	YJL140W	DXO1	Q06349	442 aa		3.99	□□□□□ -1.77
RPB4	YJL140W	PBP4	Q07362	185 aa	Known RBP	3.99	□□□□□ -1.77
RPB4	YJL140W	FIT2	Q08906	153 aa		3.99	□□□□□ -1.77
RPB4	YJL140W	SNU23	Q12368	194 aa	Predicted RBP	3.99	□□□□□ -1.77
RPB4	YJL140W	YGL010W	P25338	174 aa		3.98	□□□□□ -1.77
RPB4	YJL140W	FPR2	P32472	135 aa		3.98	□□□□□ -1.77
RPB4	YJL140W	SFT2	P38166	215 aa		3.98	□□□□□ -1.77
RPB4	YJL140W	CSH1	P38287	376 aa		3.98	□□□□□ -1.77
RPB4	YJL140W	PAU5	P43575	122 aa		3.98	□□□□□ -1.77
RPB4	YJL140W	YGL185C	P53100	379 aa		3.98	□□□□□ -1.77
RPB4	YJL140W	TOM7	P53507	60 aa		3.98	□□□□□ -1.77
RPB4	YJL140W	AYT1	Q12226	474 aa		3.98	□□□□□ -1.77
RPB4	YJL140W	YOP1	Q12402	180 aa		3.98	□□□□□ -1.77
RPB4	YJL140W	FMP49	A0A023PZB3	126 aa		3.97	□□□□□ -1.77
RPB4	YJL140W	NHP6A	P11632	93 aa	Known RBP	3.97	□□□□□ -1.77
RPB4	YJL140W	HSP12	P22943	109 aa	Known RBP	3.97	□□□□□ -1.77
RPB4	YJL140W	RRT1	P38192	103 aa		3.97	□□□□□ -1.77
RPB4	YJL140W	HSP10	P38910	106 aa		3.97	□□□□□ -1.77
RPB4	YJL140W	CYB5	P40312	120 aa		3.97	□□□□□ -1.77
RPB4	YJL140W	FIP1	P45976	327 aa		3.97	□□□□□ -1.77
RPB4	YJL140W	YJL027C	P47063	138 aa	Predicted RBP	3.97	□□□□□ -1.77
RPB4	YJL140W	DUO1	P53168	247 aa	Known RBP	3.97	□□□□□ -1.77
RPB4	YJL140W	OCA2	P53949	197 aa		3.97	□□□□□ -1.77
RPB4	YJL140W	YHR213W	P0CI67	198 aa		3.96	□□□□□ -1.78
RPB4	YJL140W	SRP21	P32342	167 aa		3.96	□□□□□ -1.78
RPB4	YJL140W	ACP1	P32463	125 aa		3.96	□□□□□ -1.78
RPB4	YJL140W	YKL075C	P36083	450 aa		3.96	□□□□□ -1.78
RPB4	YJL140W	YHR173C	P38864	112 aa		3.96	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 82 ms