RNA–Protein interactions for RNA: YHR170W

NMD3, Transcript of Protein involved in nuclear export of the large ribosomal subunit, yeastyeast

Gene NMD3, Length 1,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD3YHR170W YPS3Q12303 508 aa3.63□□□□□ -1.83
NMD3YHR170W YKL183C-AQ3E765 70 aa3.63□□□□□ -1.83
NMD3YHR170W YDR157WA0A023PZE8 133 aa3.62□□□□□ -1.83
NMD3YHR170W SHB17P36136 271 aaKnown RBP3.62□□□□□ -1.83
NMD3YHR170W YPT31P38555 223 aaKnown RBP3.62□□□□□ -1.83
NMD3YHR170W SUR2P38992 349 aa3.62□□□□□ -1.83
NMD3YHR170W RTS2P40962 232 aa3.62□□□□□ -1.83
NMD3YHR170W LST8P41318 303 aa3.62□□□□□ -1.83
NMD3YHR170W CPD1P53314 239 aa3.62□□□□□ -1.83
NMD3YHR170W YMR317WQ04893 1140 aa3.62□□□□□ -1.83
NMD3YHR170W YLR179CQ06252 201 aaKnown RBP3.62□□□□□ -1.83
NMD3YHR170W YLR112WQ12130 139 aa3.62□□□□□ -1.83
NMD3YHR170W SME1Q12330 94 aaPredicted RBP3.62□□□□□ -1.83
NMD3YHR170W BGL2P15703 313 aaKnown RBP3.61□□□□□ -1.83
NMD3YHR170W DER1P38307 211 aa3.61□□□□□ -1.83
NMD3YHR170W SHG1P38337 142 aa3.61□□□□□ -1.83
NMD3YHR170W YCH1P42937 148 aa3.61□□□□□ -1.83
NMD3YHR170W SSU72P53538 206 aaPredicted RBP3.61□□□□□ -1.83
NMD3YHR170W CAF40P53829 373 aa3.61□□□□□ -1.83
NMD3YHR170W YML108WQ03759 105 aa3.61□□□□□ -1.83
NMD3YHR170W SHH3Q04487 196 aa3.61□□□□□ -1.83
NMD3YHR170W IRC23Q08416 157 aa3.61□□□□□ -1.83
NMD3YHR170W ATX2Q12067 313 aa3.61□□□□□ -1.83
NMD3YHR170W YPR145C-AQ2V2P0 78 aa3.61□□□□□ -1.83
NMD3YHR170W QCR9P22289 66 aa3.6□□□□□ -1.83
NMD3YHR170W TCA17P32613 152 aa3.6□□□□□ -1.83
NMD3YHR170W YNK1P36010 153 aaKnown RBP3.6□□□□□ -1.83
NMD3YHR170W SIM1P40472 476 aa3.6□□□□□ -1.83
NMD3YHR170W PAU4P53427 120 aa3.6□□□□□ -1.83
NMD3YHR170W BOR1P53838 576 aa3.6□□□□□ -1.83
NMD3YHR170W YMR166CQ03829 368 aa3.6□□□□□ -1.83
NMD3YHR170W PIS1P06197 220 aaKnown RBP3.59□□□□□ -1.83
NMD3YHR170W PAU1P0CE88 120 aa3.59□□□□□ -1.83
NMD3YHR170W PAU14P0CE89 120 aa3.59□□□□□ -1.83
NMD3YHR170W PAU6P0CE90 120 aa3.59□□□□□ -1.83
NMD3YHR170W PAU18P0CE91 120 aa3.59□□□□□ -1.83
NMD3YHR170W PAU8P0CE92 120 aa3.59□□□□□ -1.83
NMD3YHR170W PAU11P0CE93 120 aa3.59□□□□□ -1.83
NMD3YHR170W YCR007CP25354 239 aa3.59□□□□□ -1.83
NMD3YHR170W YCR022CP25620 114 aa3.59□□□□□ -1.83
NMD3YHR170W NTF2P33331 125 aaKnown RBP3.59□□□□□ -1.83
NMD3YHR170W TRS20P38334 175 aa3.59□□□□□ -1.83
NMD3YHR170W PAU13P38725 120 aa3.59□□□□□ -1.83
NMD3YHR170W YAR068WP39564 161 aa3.59□□□□□ -1.83
NMD3YHR170W SMD3P43321 101 aaKnown RBP3.59□□□□□ -1.83
NMD3YHR170W KEG1P43614 200 aa3.59□□□□□ -1.83
NMD3YHR170W DSK2P48510 373 aa3.59□□□□□ -1.83
NMD3YHR170W BNS1P50084 137 aa3.59□□□□□ -1.83
NMD3YHR170W MIC27P50945 234 aa3.59□□□□□ -1.83
NMD3YHR170W YGR018CP53211 109 aa3.59□□□□□ -1.83
NMD3YHR170W PAU10Q03050 120 aa3.59□□□□□ -1.83
NMD3YHR170W PAU20Q08322 120 aa3.59□□□□□ -1.83
NMD3YHR170W ERV2Q12284 196 aa3.59□□□□□ -1.83
NMD3YHR170W PAU9Q3E770 120 aa3.59□□□□□ -1.83
NMD3YHR170W DYN1P36022 4092 aa3.59□□□□□ -1.83
NMD3YHR170W RPL31AP0C2H8 113 aaKnown RBP3.59□□□□□ -1.84
NMD3YHR170W RPL42AP0CX27 106 aaKnown RBP3.59□□□□□ -1.84
NMD3YHR170W RPL42BP0CX28 106 aaKnown RBP3.59□□□□□ -1.84
NMD3YHR170W PHO85P17157 305 aa3.59□□□□□ -1.84
NMD3YHR170W TOM40P23644 387 aaKnown RBP3.59□□□□□ -1.84
NMD3YHR170W BDH1P39714 382 aa3.59□□□□□ -1.84
NMD3YHR170W HUA1P40325 198 aa3.59□□□□□ -1.84
NMD3YHR170W POG1P40473 351 aa3.59□□□□□ -1.84
NMD3YHR170W RNA15P25299 296 aaPredicted RBP3.58□□□□□ -1.84
NMD3YHR170W MRPL38P35996 138 aaPredicted RBP3.58□□□□□ -1.84
NMD3YHR170W PHD1P36093 366 aa3.58□□□□□ -1.84
NMD3YHR170W ATG8P38182 117 aaRIP-Chip data3.58□□□□□ -1.84not detected
NMD3YHR170W YBL071CP38185 102 aa3.58□□□□□ -1.84
NMD3YHR170W VMA21P41806 77 aa3.58□□□□□ -1.84
NMD3YHR170W NSE4P43124 402 aa3.58□□□□□ -1.84
NMD3YHR170W CDC7P06243 507 aa3.57□□□□□ -1.84
NMD3YHR170W YCL042WP25572 119 aa3.57□□□□□ -1.84
NMD3YHR170W POF1P25576 258 aa3.57□□□□□ -1.84
NMD3YHR170W ALK2P32789 676 aaPredicted RBP3.57□□□□□ -1.84
NMD3YHR170W TIR2P33890 251 aa3.57□□□□□ -1.84
NMD3YHR170W LSM2P38203 95 aaKnown RBP3.57□□□□□ -1.84
NMD3YHR170W CSH1P38287 376 aa3.57□□□□□ -1.84
NMD3YHR170W DOG2P38773 246 aa3.57□□□□□ -1.84
NMD3YHR170W DOG1P38774 246 aa3.57□□□□□ -1.84
NMD3YHR170W SNU13P39990 126 aaKnown RBP3.57□□□□□ -1.84
NMD3YHR170W YIL163CP40448 117 aa3.57□□□□□ -1.84
NMD3YHR170W YIA6P40556 373 aa3.57□□□□□ -1.84
NMD3YHR170W PHS1P40857 217 aa3.57□□□□□ -1.84
NMD3YHR170W YIP3P53633 176 aa3.57□□□□□ -1.84
NMD3YHR170W LOA1Q06508 300 aa3.57□□□□□ -1.84
NMD3YHR170W RPB3P16370 318 aaKnown RBP3.56□□□□□ -1.84
NMD3YHR170W AVT5P38176 459 aa3.56□□□□□ -1.84
NMD3YHR170W AME1P38313 324 aa3.56□□□□□ -1.84
NMD3YHR170W PGD1P40356 397 aa3.56□□□□□ -1.84
NMD3YHR170W DAN1P47178 298 aa3.56□□□□□ -1.84
NMD3YHR170W MST27P53176 234 aa3.56□□□□□ -1.84
NMD3YHR170W YGR026WP53217 278 aa3.56□□□□□ -1.84
NMD3YHR170W YMR181CQ03231 154 aa3.56□□□□□ -1.84
NMD3YHR170W TIM18Q08749 192 aa3.56□□□□□ -1.84
NMD3YHR170W RAD28Q12021 506 aa3.56□□□□□ -1.84
NMD3YHR170W TPT1Q12272 230 aaKnown RBP3.56□□□□□ -1.84
NMD3YHR170W RPL28P02406 149 aaKnown RBP3.55□□□□□ -1.84
NMD3YHR170W ADH3P07246 375 aaKnown RBP3.55□□□□□ -1.84
NMD3YHR170W YFL068WP0CX99 160 aa3.55□□□□□ -1.84
NMD3YHR170W YLL066W-AP0CY00 160 aa3.55□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 45.1 ms