RNA–Protein interactions for RNA: YDR378C

LSM6, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM6, Length 261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM6YDR378C FIG1P38224 298 aa1.78□□□□□ -2.12
LSM6YDR378C APS3P47064 194 aa1.78□□□□□ -2.12
LSM6YDR378C KEI1Q06346 221 aa1.78□□□□□ -2.12
LSM6YDR378C YEL014CP39999 101 aa1.77□□□□□ -2.13
LSM6YDR378C CCW12Q12127 133 aa1.77□□□□□ -2.13
LSM6YDR378C BPT1P14772 1559 aa1.76□□□□□ -2.13
LSM6YDR378C MDS3P53094 1487 aa1.76□□□□□ -2.13
LSM6YDR378C MRS4P23500 304 aa1.76□□□□□ -2.13
LSM6YDR378C NMA1Q06178 401 aaKnown RBP1.76□□□□□ -2.13
LSM6YDR378C VAM10Q08474 114 aa1.76□□□□□ -2.13
LSM6YDR378C YGL041W-AP0C5N3 154 aa1.75□□□□□ -2.13
LSM6YDR378C YER181CP40097 107 aa1.75□□□□□ -2.13
LSM6YDR378C GLC8P41818 229 aa1.75□□□□□ -2.13
LSM6YDR378C FMN1Q03778 218 aa1.75□□□□□ -2.13
LSM6YDR378C BUD4P47136 1447 aa1.74□□□□□ -2.13
LSM6YDR378C UGX2P32772 223 aa1.74□□□□□ -2.13
LSM6YDR378C AIM36Q03798 255 aa1.74□□□□□ -2.13
LSM6YDR378C RRT7Q07829 113 aa1.74□□□□□ -2.13
LSM6YDR378C CMC4Q3E7A9 73 aa1.74□□□□□ -2.13
LSM6YDR378C YER188C-AP0C0V2 99 aa1.73□□□□□ -2.13
LSM6YDR378C ECM31P38122 312 aa1.73□□□□□ -2.13
LSM6YDR378C RCF2P53721 224 aa1.73□□□□□ -2.13
LSM6YDR378C RIF1P29539 1916 aa1.72□□□□□ -2.13
LSM6YDR378C HSP150P32478 413 aa1.72□□□□□ -2.13
LSM6YDR378C YBR027CP38220 110 aa1.72□□□□□ -2.13
LSM6YDR378C SMD2Q06217 110 aaKnown RBP1.72□□□□□ -2.13
LSM6YDR378C RFU1Q08003 200 aa1.72□□□□□ -2.13
LSM6YDR378C PET20Q99373 253 aa1.72□□□□□ -2.13
LSM6YDR378C CDC25P04821 1589 aa1.72□□□□□ -2.13
LSM6YDR378C PEP1P32319 1579 aa1.72□□□□□ -2.13
LSM6YDR378C TCB3Q03640 1545 aaKnown RBP1.71□□□□□ -2.14
LSM6YDR378C PHO13P19881 312 aa1.71□□□□□ -2.14
LSM6YDR378C ARC19P33204 171 aaKnown RBP1.71□□□□□ -2.14
LSM6YDR378C ATP19P81451 68 aa1.71□□□□□ -2.14
LSM6YDR378C SPT6P23615 1451 aaKnown RBP1.7□□□□□ -2.14
LSM6YDR378C HIR3P47171 1648 aa1.7□□□□□ -2.14
LSM6YDR378C LTE1P07866 1435 aa1.7□□□□□ -2.14
LSM6YDR378C SRP21P32342 167 aa1.7□□□□□ -2.14
LSM6YDR378C DNF1P32660 1571 aa1.7□□□□□ -2.14
LSM6YDR378C MRPL24P36525 258 aaPredicted RBP1.7□□□□□ -2.14
LSM6YDR378C YJL218WP40892 196 aaKnown RBP1.7□□□□□ -2.14
LSM6YDR378C IRC19Q07843 230 aa1.7□□□□□ -2.14
LSM6YDR378C YCF1P39109 1515 aaKnown RBP1.7□□□□□ -2.14
LSM6YDR378C RPO31P04051 1460 aa1.69□□□□□ -2.14
LSM6YDR378C IRC20Q06554 1556 aa1.69□□□□□ -2.14
LSM6YDR378C FMP49A0A023PZB3 126 aa1.69□□□□□ -2.14
LSM6YDR378C HYP2P23301 157 aaKnown RBP1.68□□□□□ -2.14
LSM6YDR378C TMA23Q03525 211 aa1.68□□□□□ -2.14
LSM6YDR378C SKI3P17883 1432 aaKnown RBP1.67□□□□□ -2.14
LSM6YDR378C HSL1P34244 1518 aa1.67□□□□□ -2.14
LSM6YDR378C YCR001WP25347 104 aa1.67□□□□□ -2.14
LSM6YDR378C IPT1P38954 527 aa1.67□□□□□ -2.14
LSM6YDR378C RAV2Q03956 351 aa1.67□□□□□ -2.14
LSM6YDR378C MYO2P19524 1574 aaKnown RBP1.67□□□□□ -2.14
LSM6YDR378C RPA190P10964 1664 aaKnown RBP1.67□□□□□ -2.14
LSM6YDR378C HFA1P32874 2273 aa1.66□□□□□ -2.14
LSM6YDR378C PKR1Q03880 122 aaKnown RBP1.65□□□□□ -2.15
LSM6YDR378C SCS22Q6Q595 175 aa1.65□□□□□ -2.15
LSM6YDR378C THO2P53552 1597 aaKnown RBP1.64□□□□□ -2.15
LSM6YDR378C PET54P10834 293 aa1.64□□□□□ -2.15
LSM6YDR378C DDR48P18899 430 aaKnown RBP1.64□□□□□ -2.15
LSM6YDR378C GPI2P46961 280 aa1.64□□□□□ -2.15
LSM6YDR378C YPR153WQ06537 140 aa1.64□□□□□ -2.15
LSM6YDR378C EFM5P53200 248 aaKnown RBP1.63□□□□□ -2.15
LSM6YDR378C EST3Q03096 181 aa1.63□□□□□ -2.15
LSM6YDR378C GPI11Q06636 219 aa1.63□□□□□ -2.15
LSM6YDR378C SSK2P53599 1579 aa1.63□□□□□ -2.15
LSM6YDR378C GEA2P39993 1459 aaKnown RBP1.63□□□□□ -2.15
LSM6YDR378C HSP12P22943 109 aaKnown RBP1.62□□□□□ -2.15
LSM6YDR378C UFD4P33202 1483 aa1.62□□□□□ -2.15
LSM6YDR378C YOL013W-AP0C272 63 aaPredicted RBP1.61□□□□□ -2.15
LSM6YDR378C DNF2Q12675 1612 aa1.61□□□□□ -2.15
LSM6YDR378C CDC39P25655 2108 aaKnown RBP1.61□□□□□ -2.15
LSM6YDR378C XRN1P22147 1528 aaKnown RBP1.61□□□□□ -2.15
LSM6YDR378C ATG2P53855 1592 aa1.6□□□□□ -2.15
LSM6YDR378C YOR093CQ12275 1648 aa1.6□□□□□ -2.15
LSM6YDR378C ATG8P38182 117 aaRIP-Chip data1.6□□□□□ -2.15not detected
LSM6YDR378C MOG1P47123 218 aa1.6□□□□□ -2.15
LSM6YDR378C VMA10P48836 114 aaKnown RBP1.6□□□□□ -2.15
LSM6YDR378C YNL122CP53921 115 aaPredicted RBP1.6□□□□□ -2.15
LSM6YDR378C ESC1Q03661 1658 aaKnown RBP1.6□□□□□ -2.15
LSM6YDR378C NHP6AP11632 93 aaKnown RBP1.59□□□□□ -2.15
LSM6YDR378C IPI1P38803 334 aaPredicted RBP1.59□□□□□ -2.15
LSM6YDR378C SED1Q01589 338 aa1.59□□□□□ -2.15
LSM6YDR378C QCR6P00127 147 aa1.58□□□□□ -2.16
LSM6YDR378C UBR1P19812 1950 aa1.58□□□□□ -2.16
LSM6YDR378C YOR072WQ08486 104 aa1.57□□□□□ -2.16
LSM6YDR378C RKR1Q04781 1562 aa1.56□□□□□ -2.16
LSM6YDR378C YPK9Q12697 1472 aa1.56□□□□□ -2.16
LSM6YDR378C YRF1-1P0CX20 1796 aa1.55□□□□□ -2.16
LSM6YDR378C YRF1-5P0CX21 1796 aa1.55□□□□□ -2.16
LSM6YDR378C YRF1-8P0CX22 1796 aa1.55□□□□□ -2.16
LSM6YDR378C RPL33AP05744 107 aaKnown RBP1.55□□□□□ -2.16
LSM6YDR378C HAP2P06774 265 aa1.55□□□□□ -2.16
LSM6YDR378C HUT1Q12520 339 aa1.55□□□□□ -2.16
LSM6YDR378C YSP2Q06681 1438 aa1.55□□□□□ -2.16
LSM6YDR378C YOR1P53049 1477 aa1.55□□□□□ -2.16
LSM6YDR378C PDR15Q04182 1529 aaKnown RBP1.55□□□□□ -2.16
LSM6YDR378C YDR366CP87287 132 aa1.54□□□□□ -2.16
LSM6YDR378C RIB3Q99258 208 aa1.54□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 25 ms