RNA–Protein interactions for RNA: YDR243C

PRP28, Transcript of RNA helicase in the DEAD-box family, yeastyeast

Gene PRP28, Length 1,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP28YDR243C SNF11P38956 169 aa3.78□□□□□ -1.8
PRP28YDR243C SFT1P43682 97 aa3.78□□□□□ -1.8
PRP28YDR243C CTK2P46962 323 aa3.78□□□□□ -1.8
PRP28YDR243C YPL039WQ03080 316 aa3.78□□□□□ -1.8
PRP28YDR243C VPS71Q03433 280 aa3.78□□□□□ -1.8
PRP28YDR243C CRD1Q07560 283 aa3.78□□□□□ -1.8
PRP28YDR243C BOL1Q3E793 110 aa3.78□□□□□ -1.8
PRP28YDR243C GSC2P40989 1895 aa3.78□□□□□ -1.81
PRP28YDR243C LAA1P39526 2014 aa3.77□□□□□ -1.81
PRP28YDR243C PBI2P0CT04 75 aaKnown RBP3.77□□□□□ -1.81
PRP28YDR243C MDH2P22133 377 aa3.77□□□□□ -1.81
PRP28YDR243C MRS4P23500 304 aa3.77□□□□□ -1.81
PRP28YDR243C FMP46P36141 133 aaKnown RBP3.77□□□□□ -1.81
PRP28YDR243C LYS1P38998 373 aaRIP-Chip data3.77□□□□□ -1.81not detected
PRP28YDR243C BAT2P47176 376 aaKnown RBP3.77□□□□□ -1.81
PRP28YDR243C MET31Q03081 177 aa3.77□□□□□ -1.81
PRP28YDR243C SNT309Q06091 175 aaPredicted RBP3.77□□□□□ -1.81
PRP28YDR243C YNL277W-AQ3E7Z0 62 aa3.77□□□□□ -1.81
PRP28YDR243C YFL041W-AQ3E817 63 aa3.77□□□□□ -1.81
PRP28YDR243C AGA2P32781 87 aa3.76□□□□□ -1.81
PRP28YDR243C REC104P33323 182 aa3.76□□□□□ -1.81
PRP28YDR243C YBR184WP38299 523 aa3.76□□□□□ -1.81
PRP28YDR243C BRR6P53062 197 aa3.76□□□□□ -1.81
PRP28YDR243C YGR219WP53307 113 aa3.76□□□□□ -1.81
PRP28YDR243C YNR064CP53750 290 aa3.76□□□□□ -1.81
PRP28YDR243C LPP1Q04396 274 aa3.76□□□□□ -1.81
PRP28YDR243C YDL242WQ07746 117 aa3.76□□□□□ -1.81
PRP28YDR243C YOR105WQ08504 108 aa3.76□□□□□ -1.81
PRP28YDR243C DFM1Q12743 341 aaKnown RBP3.76□□□□□ -1.81
PRP28YDR243C RPS22BQ3E7Y3 130 aaKnown RBP3.76□□□□□ -1.81
PRP28YDR243C FLO1P32768 1537 aa3.76□□□□□ -1.81
PRP28YDR243C COX5AP00424 153 aa3.76□□□□□ -1.81
PRP28YDR243C ANS1P38832 159 aa3.76□□□□□ -1.81
PRP28YDR243C YGR164WP53291 111 aa3.76□□□□□ -1.81
PRP28YDR243C YLR152CP54072 576 aa3.76□□□□□ -1.81
PRP28YDR243C MRX11Q03079 207 aa3.76□□□□□ -1.81
PRP28YDR243C HPA2Q06592 156 aa3.76□□□□□ -1.81
PRP28YDR243C RAF1Q06891 181 aa3.76□□□□□ -1.81
PRP28YDR243C GEP3Q08622 556 aa3.76□□□□□ -1.81
PRP28YDR243C YDL007C-AQ2V2Q0 85 aa3.76□□□□□ -1.81
PRP28YDR243C YPR096CO13587 100 aa3.75□□□□□ -1.81
PRP28YDR243C MDM10P18409 493 aa3.75□□□□□ -1.81
PRP28YDR243C YCR025CP25352 136 aa3.75□□□□□ -1.81
PRP28YDR243C SCD6P45978 349 aaKnown RBP RIP-Chip data3.75□□□□□ -1.81not detected
PRP28YDR243C VPS25P47142 202 aa3.75□□□□□ -1.81
PRP28YDR243C TIS11P47977 285 aa3.75□□□□□ -1.81
PRP28YDR243C TPC1P53257 314 aa3.75□□□□□ -1.81
PRP28YDR243C HSK3P69852 69 aa3.75□□□□□ -1.81
PRP28YDR243C NDD1Q08887 554 aa3.75□□□□□ -1.81
PRP28YDR243C YCL021W-AQ96VH3 125 aa3.75□□□□□ -1.81
PRP28YDR243C TRP1P00912 224 aa3.74□□□□□ -1.81
PRP28YDR243C TOM40P23644 387 aaKnown RBP3.74□□□□□ -1.81
PRP28YDR243C ERG4P25340 473 aa3.74□□□□□ -1.81
PRP28YDR243C YCR050CP25630 102 aa3.74□□□□□ -1.81
PRP28YDR243C FUN19P28003 413 aaPredicted RBP3.74□□□□□ -1.81
PRP28YDR243C AHT1P29589 182 aa3.74□□□□□ -1.81
PRP28YDR243C YPS1P32329 569 aa3.74□□□□□ -1.81
PRP28YDR243C PAM17P36147 197 aa3.74□□□□□ -1.81
PRP28YDR243C ELO1P39540 310 aa3.74□□□□□ -1.81
PRP28YDR243C MST28P39552 234 aa3.74□□□□□ -1.81
PRP28YDR243C DSK2P48510 373 aa3.74□□□□□ -1.81
PRP28YDR243C YGL118CP53132 145 aa3.74□□□□□ -1.81
PRP28YDR243C SWT21P53873 357 aaPredicted RBP3.74□□□□□ -1.81
PRP28YDR243C COX12Q01519 83 aa3.74□□□□□ -1.81
PRP28YDR243C NPC2Q12408 173 aa3.74□□□□□ -1.81
PRP28YDR243C KSH1Q8TGJ3 72 aa3.74□□□□□ -1.81
PRP28YDR243C YBR126W-AQ8TGU7 68 aa3.74□□□□□ -1.81
PRP28YDR243C PMD1P32634 1753 aa3.74□□□□□ -1.81
PRP28YDR243C RPL28P02406 149 aaKnown RBP3.74□□□□□ -1.81
PRP28YDR243C RPL2AP0CX45 254 aaKnown RBP3.74□□□□□ -1.81
PRP28YDR243C RPL2BP0CX46 254 aaKnown RBP3.74□□□□□ -1.81
PRP28YDR243C SPO13P23624 291 aa3.74□□□□□ -1.81
PRP28YDR243C TOM6P33448 61 aa3.74□□□□□ -1.81
PRP28YDR243C YPT10P38146 199 aa3.74□□□□□ -1.81
PRP28YDR243C YER079WP40052 210 aaKnown RBP3.74□□□□□ -1.81
PRP28YDR243C YNL195CP40168 261 aa3.74□□□□□ -1.81
PRP28YDR243C GPI2P46961 280 aa3.74□□□□□ -1.81
PRP28YDR243C MIX17Q03667 156 aa3.74□□□□□ -1.81
PRP28YDR243C GPI19Q04082 140 aa3.74□□□□□ -1.81
PRP28YDR243C YOR292CQ08743 309 aa3.74□□□□□ -1.81
PRP28YDR243C YDL180WQ12301 547 aa3.74□□□□□ -1.81
PRP28YDR243C COA2Q3E823 68 aa3.74□□□□□ -1.81
PRP28YDR243C STT4P37297 1900 aa3.73□□□□□ -1.81
PRP28YDR243C SOD1P00445 154 aaKnown RBP3.73□□□□□ -1.81
PRP28YDR243C YOL162WP0CF19 215 aa3.73□□□□□ -1.81
PRP28YDR243C IES6P32617 166 aa3.73□□□□□ -1.81
PRP28YDR243C MRPS5P33759 307 aa3.73□□□□□ -1.81
PRP28YDR243C YBL059WP34224 193 aa3.73□□□□□ -1.81
PRP28YDR243C AUR1P36107 401 aaPredicted RBP3.73□□□□□ -1.81
PRP28YDR243C NRG2P38082 220 aa3.73□□□□□ -1.81
PRP28YDR243C ECM34P38728 170 aa3.73□□□□□ -1.81
PRP28YDR243C YHL018WP38744 120 aaPredicted RBP3.73□□□□□ -1.81
PRP28YDR243C RPS10BP46784 105 aaKnown RBP3.73□□□□□ -1.81
PRP28YDR243C PIR3Q03180 325 aa3.73□□□□□ -1.81
PRP28YDR243C RPS10AQ08745 105 aaPredicted RBP3.73□□□□□ -1.81
PRP28YDR243C RFM1Q12192 310 aa3.73□□□□□ -1.81
PRP28YDR243C AYT1Q12226 474 aa3.73□□□□□ -1.81
PRP28YDR243C DAD1Q12248 94 aa3.73□□□□□ -1.81
PRP28YDR243C YHL042WP38729 150 aa3.72□□□□□ -1.81
PRP28YDR243C SVP26P38869 228 aa3.72□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms