RNA–Protein interactions for RNA: YDL091C

UBX3, Transcript of Subunit of the DSC ubiquitin ligase complex, yeastyeast

Gene UBX3, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX3YDL091C OAC1P32332 324 aa1.86□□□□□ -2.11
UBX3YDL091C MRPL28P36527 147 aa1.86□□□□□ -2.11
UBX3YDL091C PDX3P38075 228 aaKnown RBP1.86□□□□□ -2.11
UBX3YDL091C ATG8P38182 117 aaRIP-Chip data1.86□□□□□ -2.11not detected
UBX3YDL091C SLM6P38343 150 aa1.86□□□□□ -2.11
UBX3YDL091C YHL026CP38740 315 aa1.86□□□□□ -2.11
UBX3YDL091C SPC25P40014 221 aa1.86□□□□□ -2.11
UBX3YDL091C RPA43P46669 326 aa1.86□□□□□ -2.11
UBX3YDL091C OST2P46964 130 aa1.86□□□□□ -2.11
UBX3YDL091C YJL028WP47062 111 aa1.86□□□□□ -2.11
UBX3YDL091C XPT1P47165 209 aa1.86□□□□□ -2.11
UBX3YDL091C RPL22BP56628 122 aaKnown RBP1.86□□□□□ -2.11
UBX3YDL091C CDC14Q00684 551 aa1.86□□□□□ -2.11
UBX3YDL091C CYT2Q00873 224 aa1.86□□□□□ -2.11
UBX3YDL091C COF1Q03048 143 aaKnown RBP1.86□□□□□ -2.11
UBX3YDL091C THI74Q04083 370 aa1.86□□□□□ -2.11
UBX3YDL091C GRH1Q04410 372 aaKnown RBP1.86□□□□□ -2.11
UBX3YDL091C MHT1Q12525 324 aa1.86□□□□□ -2.11
UBX3YDL091C YNL277W-AQ3E7Z0 62 aa1.86□□□□□ -2.11
UBX3YDL091C YNR034W-AQ3E841 98 aa1.86□□□□□ -2.11
UBX3YDL091C YRF1-2P40105 1681 aa1.86□□□□□ -2.11
UBX3YDL091C VMR1P38735 1592 aa1.86□□□□□ -2.11
UBX3YDL091C YOR093CQ12275 1648 aa1.86□□□□□ -2.11
UBX3YDL091C PAI3P01094 68 aa1.85□□□□□ -2.11
UBX3YDL091C ADH3P07246 375 aaKnown RBP1.85□□□□□ -2.11
UBX3YDL091C SEC4P07560 215 aaKnown RBP1.85□□□□□ -2.11
UBX3YDL091C SPS18P32572 300 aa1.85□□□□□ -2.11
UBX3YDL091C CLB6P32943 380 aa1.85□□□□□ -2.11
UBX3YDL091C SHB17P36136 271 aaKnown RBP1.85□□□□□ -2.11
UBX3YDL091C MED6P38782 295 aa1.85□□□□□ -2.11
UBX3YDL091C AVT2P39981 480 aa1.85□□□□□ -2.11
UBX3YDL091C MRPL49P40858 161 aaPredicted RBP1.85□□□□□ -2.11
UBX3YDL091C TTI2P47168 421 aa1.85□□□□□ -2.11
UBX3YDL091C MIC26P50087 233 aa1.85□□□□□ -2.11
UBX3YDL091C MPC1P53157 130 aaKnown RBP1.85□□□□□ -2.11
UBX3YDL091C YGR164WP53291 111 aa1.85□□□□□ -2.11
UBX3YDL091C SEN15Q04675 128 aa1.85□□□□□ -2.11
UBX3YDL091C YPR174CQ06616 221 aaPredicted RBP1.85□□□□□ -2.11
UBX3YDL091C YLR126CQ12288 251 aa1.85□□□□□ -2.11
UBX3YDL091C HUT1Q12520 339 aa1.85□□□□□ -2.11
UBX3YDL091C YPR145C-AQ2V2P0 78 aa1.85□□□□□ -2.11
UBX3YDL091C YBL112CQ3E7Y4 105 aa1.85□□□□□ -2.11
UBX3YDL091C IGO2Q9P305 131 aa1.85□□□□□ -2.11
UBX3YDL091C URB1P34241 1764 aaKnown RBP1.85□□□□□ -2.11
UBX3YDL091C TY4B-JP47024 1803 aa1.85□□□□□ -2.11
UBX3YDL091C MBF1O14467 151 aaKnown RBP1.85□□□□□ -2.11
UBX3YDL091C COX5AP00424 153 aa1.85□□□□□ -2.11
UBX3YDL091C SNF4P12904 322 aa1.85□□□□□ -2.11
UBX3YDL091C RPB3P16370 318 aaKnown RBP1.85□□□□□ -2.11
UBX3YDL091C NTF2P33331 125 aaKnown RBP1.85□□□□□ -2.11
UBX3YDL091C SFK1P35735 353 aa1.85□□□□□ -2.11
UBX3YDL091C YKR041WP36134 250 aa1.85□□□□□ -2.11
UBX3YDL091C GAA1P39012 614 aa1.85□□□□□ -2.11
UBX3YDL091C HPA3P39979 161 aa1.85□□□□□ -2.11
UBX3YDL091C YEA4P40004 342 aa1.85□□□□□ -2.11
UBX3YDL091C MSL1P40567 111 aaPredicted RBP1.85□□□□□ -2.11
UBX3YDL091C DSK2P48510 373 aa1.85□□□□□ -2.11
UBX3YDL091C THG1P53215 237 aaKnown RBP1.85□□□□□ -2.11
UBX3YDL091C YGR039WP53225 103 aa1.85□□□□□ -2.11
UBX3YDL091C ERV29P53337 310 aa1.85□□□□□ -2.11
UBX3YDL091C GAS3Q03655 524 aa1.85□□□□□ -2.11
UBX3YDL091C NAT3Q06504 195 aa1.85□□□□□ -2.11
UBX3YDL091C GPI11Q06636 219 aa1.85□□□□□ -2.11
UBX3YDL091C YOL024WQ08172 172 aa1.85□□□□□ -2.11
UBX3YDL091C YOL131WQ08270 108 aa1.85□□□□□ -2.11
UBX3YDL091C VMA9Q3E7B6 73 aa1.85□□□□□ -2.11
UBX3YDL091C YIL134C-AQ45U18 67 aa1.85□□□□□ -2.11
UBX3YDL091C DNF3Q12674 1656 aa1.84□□□□□ -2.11
UBX3YDL091C MLP1Q02455 1875 aaKnown RBP1.84□□□□□ -2.11
UBX3YDL091C YRF1-1P0CX20 1796 aa1.84□□□□□ -2.12
UBX3YDL091C YRF1-5P0CX21 1796 aa1.84□□□□□ -2.12
UBX3YDL091C YRF1-8P0CX22 1796 aa1.84□□□□□ -2.12
UBX3YDL091C RPL2AP0CX45 254 aaKnown RBP1.84□□□□□ -2.12
UBX3YDL091C RPL2BP0CX46 254 aaKnown RBP1.84□□□□□ -2.12
UBX3YDL091C CKS1P20486 150 aaKnown RBP1.84□□□□□ -2.12
UBX3YDL091C TMA19P35691 167 aaKnown RBP1.84□□□□□ -2.12
UBX3YDL091C LSM2P38203 95 aaKnown RBP1.84□□□□□ -2.12
UBX3YDL091C PAU15P40585 124 aa1.84□□□□□ -2.12
UBX3YDL091C SMD3P43321 101 aaKnown RBP1.84□□□□□ -2.12
UBX3YDL091C GON7P46984 123 aa1.84□□□□□ -2.12
UBX3YDL091C GEP7P53171 287 aa1.84□□□□□ -2.12
UBX3YDL091C SAY1P53324 424 aa1.84□□□□□ -2.12
UBX3YDL091C YMR166CQ03829 368 aa1.84□□□□□ -2.12
UBX3YDL091C YMR082CQ04276 118 aa1.84□□□□□ -2.12
UBX3YDL091C FIT1Q04433 528 aa1.84□□□□□ -2.12
UBX3YDL091C YMR320WQ04897 101 aa1.84□□□□□ -2.12
UBX3YDL091C FCF1Q05498 189 aaPredicted RBP1.84□□□□□ -2.12
UBX3YDL091C KEI1Q06346 221 aa1.84□□□□□ -2.12
UBX3YDL091C PRM3Q08931 133 aa1.84□□□□□ -2.12
UBX3YDL091C SUS1Q6WNK7 96 aa1.84□□□□□ -2.12
UBX3YDL091C BNI1P41832 1953 aa1.83□□□□□ -2.12
UBX3YDL091C NUP188P52593 1655 aaKnown RBP1.83□□□□□ -2.12
UBX3YDL091C FMP49A0A023PZB3 126 aa1.83□□□□□ -2.12
UBX3YDL091C CPA1P07258 411 aaKnown RBP1.83□□□□□ -2.12
UBX3YDL091C TOM40P23644 387 aaKnown RBP1.83□□□□□ -2.12
UBX3YDL091C VMA11P32842 164 aa1.83□□□□□ -2.12
UBX3YDL091C YKL102CP34249 101 aa1.83□□□□□ -2.12
UBX3YDL091C ECM33P38248 429 aaKnown RBP1.83□□□□□ -2.12
UBX3YDL091C FLX1P40464 311 aa1.83□□□□□ -2.12
UBX3YDL091C PAM16P42949 149 aa1.83□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 72.6 ms