RNA–Protein interactions for RNA: YBR160W

CDC28, Transcript of Cyclin-dependent kinase (CDK) catalytic subunit, yeastyeast

Gene CDC28, Length 897 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC28YBR160W TRM9P49957 279 aa4.06□□□□□ -1.76
CDC28YBR160W CGI121Q03705 181 aaKnown RBP4.06□□□□□ -1.76
CDC28YBR160W GRH1Q04410 372 aaKnown RBP4.06□□□□□ -1.76
CDC28YBR160W CSM4Q08955 156 aa4.06□□□□□ -1.76
CDC28YBR160W YLR050CQ12155 161 aaKnown RBP4.06□□□□□ -1.76
CDC28YBR160W YDL180WQ12301 547 aa4.06□□□□□ -1.76
CDC28YBR160W GEP5Q12393 293 aa4.06□□□□□ -1.76
CDC28YBR160W YIL046W-AQ3E7Z4 54 aa4.06□□□□□ -1.76
CDC28YBR160W SAL1D6W196 494 aa4.05□□□□□ -1.76
CDC28YBR160W SEC4P07560 215 aaKnown RBP4.05□□□□□ -1.76
CDC28YBR160W ANB1P19211 157 aa4.05□□□□□ -1.76
CDC28YBR160W RPI1P23250 407 aaKnown RBP4.05□□□□□ -1.76
CDC28YBR160W ZRT1P32804 376 aa4.05□□□□□ -1.76
CDC28YBR160W YHR173CP38864 112 aa4.05□□□□□ -1.76
CDC28YBR160W EGT2P42835 1041 aa4.05□□□□□ -1.76
CDC28YBR160W UBC13P52490 153 aa4.05□□□□□ -1.76
CDC28YBR160W BRP1P53194 125 aa4.05□□□□□ -1.76
CDC28YBR160W GIM5Q04493 163 aa4.05□□□□□ -1.76
CDC28YBR160W NCE102Q12207 173 aaRIP-Chip data4.05□□□□□ -1.76not detected
CDC28YBR160W YLR363W-AQ3E747 85 aa4.05□□□□□ -1.76
CDC28YBR160W YOR032W-AQ8TGS1 66 aa4.05□□□□□ -1.76
CDC28YBR160W CYC3P06182 269 aa4.04□□□□□ -1.76
CDC28YBR160W RPL12AP0CX53 165 aaKnown RBP4.04□□□□□ -1.76
CDC28YBR160W RPL12BP0CX54 165 aa4.04□□□□□ -1.76
CDC28YBR160W YFL068WP0CX99 160 aa4.04□□□□□ -1.76
CDC28YBR160W YLL066W-AP0CY00 160 aa4.04□□□□□ -1.76
CDC28YBR160W YLL067W-AP0CY01 160 aa4.04□□□□□ -1.76
CDC28YBR160W CWP1P28319 239 aa4.04□□□□□ -1.76
CDC28YBR160W PHD1P36093 366 aa4.04□□□□□ -1.76
CDC28YBR160W PRY2P36110 329 aa4.04□□□□□ -1.76
CDC28YBR160W PRS4P38063 326 aaPredicted RBP4.04□□□□□ -1.76
CDC28YBR160W SEC72P39742 193 aaKnown RBP4.04□□□□□ -1.76
CDC28YBR160W TDA4P47153 279 aa4.04□□□□□ -1.76
CDC28YBR160W WSC2P53832 503 aa4.04□□□□□ -1.76
CDC28YBR160W HSK3P69852 69 aa4.04□□□□□ -1.76
CDC28YBR160W SDC1Q03323 175 aa4.04□□□□□ -1.76
CDC28YBR160W YML079WQ03629 201 aa4.04□□□□□ -1.76
CDC28YBR160W ATO3Q12359 275 aa4.04□□□□□ -1.76
CDC28YBR160W FAS1P07149 2051 aaKnown RBP4.03□□□□□ -1.76
CDC28YBR160W PAI3P01094 68 aa4.03□□□□□ -1.76
CDC28YBR160W YPT1P01123 206 aaKnown RBP4.03□□□□□ -1.76
CDC28YBR160W AQY1P0CD91 305 aa4.03□□□□□ -1.76
CDC28YBR160W DAL82P21705 255 aa4.03□□□□□ -1.76
CDC28YBR160W RPS2P25443 254 aaKnown RBP4.03□□□□□ -1.76
CDC28YBR160W ARO2P28777 376 aaKnown RBP4.03□□□□□ -1.76
CDC28YBR160W YKR070WP36151 352 aaKnown RBP4.03□□□□□ -1.76
CDC28YBR160W DYN2Q02647 92 aa4.03□□□□□ -1.76
CDC28YBR160W ECM18Q04623 453 aa4.03□□□□□ -1.76
CDC28YBR160W YOR376WQ08900 122 aa4.03□□□□□ -1.76
CDC28YBR160W YPL257WQ08974 193 aa4.03□□□□□ -1.76
CDC28YBR160W TOM1Q03280 3268 aa4.03□□□□□ -1.76
CDC28YBR160W CDC39P25655 2108 aaKnown RBP4.03□□□□□ -1.76
CDC28YBR160W MRS3P10566 314 aa4.02□□□□□ -1.77
CDC28YBR160W HSP12P22943 109 aaKnown RBP4.02□□□□□ -1.77
CDC28YBR160W YBR090CP38253 122 aa4.02□□□□□ -1.77
CDC28YBR160W YHL044WP38727 235 aa4.02□□□□□ -1.77
CDC28YBR160W LTP1P40347 161 aa4.02□□□□□ -1.77
CDC28YBR160W SSU72P53538 206 aaPredicted RBP4.02□□□□□ -1.77
CDC28YBR160W VPS71Q03433 280 aa4.02□□□□□ -1.77
CDC28YBR160W DPP1Q05521 289 aa4.02□□□□□ -1.77
CDC28YBR160W LIP2Q06005 328 aa4.02□□□□□ -1.77
CDC28YBR160W RRS1Q08746 203 aaKnown RBP4.02□□□□□ -1.77
CDC28YBR160W FIT2Q08906 153 aa4.02□□□□□ -1.77
CDC28YBR160W YMR316C-AI2HB70 103 aa4.01□□□□□ -1.77
CDC28YBR160W RPL23AP0CX41 137 aaKnown RBP4.01□□□□□ -1.77
CDC28YBR160W RPL23BP0CX42 137 aaKnown RBP4.01□□□□□ -1.77
CDC28YBR160W YOX1P34161 385 aa4.01□□□□□ -1.77
CDC28YBR160W PAU7P39545 55 aa4.01□□□□□ -1.77
CDC28YBR160W BDH1P39714 382 aa4.01□□□□□ -1.77
CDC28YBR160W YNL200CP40165 246 aaKnown RBP4.01□□□□□ -1.77
CDC28YBR160W YIL012WP40551 113 aa4.01□□□□□ -1.77
CDC28YBR160W SDS23P53172 527 aa4.01□□□□□ -1.77
CDC28YBR160W MRX11Q03079 207 aa4.01□□□□□ -1.77
CDC28YBR160W BET5Q03630 159 aa4.01□□□□□ -1.77
CDC28YBR160W YHP1Q04116 353 aa4.01□□□□□ -1.77
CDC28YBR160W MIX14Q04341 121 aa4.01□□□□□ -1.77
CDC28YBR160W ATG39Q06159 398 aa4.01□□□□□ -1.77
CDC28YBR160W FSF1Q12029 327 aaKnown RBP4.01□□□□□ -1.77
CDC28YBR160W PIS1P06197 220 aaKnown RBP4□□□□□ -1.77
CDC28YBR160W MRPL31P14063 131 aaPredicted RBP4□□□□□ -1.77
CDC28YBR160W ATP10P18496 279 aa4□□□□□ -1.77
CDC28YBR160W MRPL39P36533 70 aa4□□□□□ -1.77
CDC28YBR160W ECM33P38248 429 aaKnown RBP4□□□□□ -1.77
CDC28YBR160W YNL198CP40166 100 aa4□□□□□ -1.77
CDC28YBR160W SGN1P40561 250 aaKnown RBP RIP-Chip data4□□□□□ -1.77not detected
CDC28YBR160W YPS6P40583 537 aa4□□□□□ -1.77
CDC28YBR160W CAB4P53332 305 aa4□□□□□ -1.77
CDC28YBR160W POP3P53833 195 aaPredicted RBP4□□□□□ -1.77
CDC28YBR160W SWT21P53873 357 aaPredicted RBP4□□□□□ -1.77
CDC28YBR160W RAV2Q03956 351 aa4□□□□□ -1.77
CDC28YBR160W ARC18Q05933 178 aaKnown RBP4□□□□□ -1.77
CDC28YBR160W RAF1Q06891 181 aa4□□□□□ -1.77
CDC28YBR160W POS5Q06892 414 aa4□□□□□ -1.77
CDC28YBR160W YIL102C-AQ2V2P5 75 aa4□□□□□ -1.77
CDC28YBR160W MRS1P07266 363 aa3.99□□□□□ -1.77
CDC28YBR160W MRPS5P33759 307 aa3.99□□□□□ -1.77
CDC28YBR160W YBR144CP34215 104 aa3.99□□□□□ -1.77
CDC28YBR160W CMC1P36064 111 aa3.99□□□□□ -1.77
CDC28YBR160W YKL044WP36092 106 aa3.99□□□□□ -1.77
CDC28YBR160W CSH1P38287 376 aa3.99□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 27.5 ms