RNA–Protein interactions for RNA: YBL024W

NCL1, Transcript of S-adenosyl-L-methionine-dependent tRNA: m5C-methyltransferase, yeast

Gene NCL1, Length 2,055 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NCL1	YBL024W	SPS2	P08459	502 aa		1.11	□□□□□ -2.23
NCL1	YBL024W	RAV2	Q03956	351 aa		1.11	□□□□□ -2.23
NCL1	YBL024W	YMR320W	Q04897	101 aa		1.11	□□□□□ -2.23
NCL1	YBL024W	COA3	Q3E7B2	85 aa		1.11	□□□□□ -2.23
NCL1	YBL024W	YOR1	P53049	1477 aa		1.1	□□□□□ -2.23
NCL1	YBL024W	MRPL24	P36525	258 aa	Predicted RBP	1.1	□□□□□ -2.23
NCL1	YBL024W	MET31	Q03081	177 aa		1.1	□□□□□ -2.23
NCL1	YBL024W	AVO2	Q04749	426 aa		1.1	□□□□□ -2.23
NCL1	YBL024W	YPD1	Q07688	167 aa		1.1	□□□□□ -2.23
NCL1	YBL024W	NUM1	Q00402	2748 aa		1.1	□□□□□ -2.23
NCL1	YBL024W	UBR2	Q07963	1872 aa		1.09	□□□□□ -2.23
NCL1	YBL024W	SPT6	P23615	1451 aa	Known RBP	1.09	□□□□□ -2.23
NCL1	YBL024W	ACC1	Q00955	2233 aa	Known RBP	1.09	□□□□□ -2.23
NCL1	YBL024W	NTE1	Q04958	1679 aa		1.09	□□□□□ -2.23
NCL1	YBL024W	YPR117W	Q06116	2489 aa		1.09	□□□□□ -2.24
NCL1	YBL024W	SOK1	P40317	901 aa		1.09	□□□□□ -2.24
NCL1	YBL024W	YDL157C	Q12082	118 aa		1.09	□□□□□ -2.24
NCL1	YBL024W	YHR212W-A	P0CX91	67 aa		1.08	□□□□□ -2.24
NCL1	YBL024W	DDR48	P18899	430 aa	Known RBP	1.08	□□□□□ -2.24
NCL1	YBL024W	YAP3	P38749	330 aa		1.08	□□□□□ -2.24
NCL1	YBL024W	CIN5	P40917	295 aa		1.08	□□□□□ -2.24
NCL1	YBL024W	RFU1	Q08003	200 aa		1.08	□□□□□ -2.24
NCL1	YBL024W	ADE6	P38972	1358 aa	Known RBP	1.07	□□□□□ -2.24
NCL1	YBL024W	RPS25B	P0C0T4	108 aa	Known RBP	1.07	□□□□□ -2.24
NCL1	YBL024W	SRP21	P32342	167 aa		1.07	□□□□□ -2.24
NCL1	YBL024W	YBR242W	P38331	238 aa		1.07	□□□□□ -2.24
NCL1	YBL024W	YGR201C	P42936	225 aa		1.07	□□□□□ -2.24
NCL1	YBL024W	GEP7	P53171	287 aa		1.07	□□□□□ -2.24
NCL1	YBL024W	EST3	Q03096	181 aa		1.07	□□□□□ -2.24
NCL1	YBL024W	RPS25A	Q3E792	108 aa	Predicted RBP	1.07	□□□□□ -2.24
NCL1	YBL024W	CMC4	Q3E7A9	73 aa		1.07	□□□□□ -2.24
NCL1	YBL024W	RBL2	P48606	106 aa	Known RBP	1.06	□□□□□ -2.24
NCL1	YBL024W	RIB3	Q99258	208 aa		1.06	□□□□□ -2.24
NCL1	YBL024W	RKR1	Q04781	1562 aa		1.06	□□□□□ -2.24
NCL1	YBL024W	HSP12	P22943	109 aa	Known RBP	1.06	□□□□□ -2.24
NCL1	YBL024W	AHT1	P29589	182 aa		1.06	□□□□□ -2.24
NCL1	YBL024W	ACP1	P32463	125 aa		1.06	□□□□□ -2.24
NCL1	YBL024W	SHB17	P36136	271 aa	Known RBP	1.06	□□□□□ -2.24
NCL1	YBL024W	RCF2	P53721	224 aa		1.06	□□□□□ -2.24
NCL1	YBL024W	FMN1	Q03778	218 aa		1.06	□□□□□ -2.24
NCL1	YBL024W	RRT7	Q07829	113 aa		1.06	□□□□□ -2.24
NCL1	YBL024W	IRC19	Q07843	230 aa		1.06	□□□□□ -2.24
NCL1	YBL024W	TOR1	P35169	2470 aa		1.05	□□□□□ -2.24
NCL1	YBL024W	VAR1	P02381	398 aa		1.05	□□□□□ -2.24
NCL1	YBL024W	GPI2	P46961	280 aa		1.05	□□□□□ -2.24
NCL1	YBL024W	NMA1	Q06178	401 aa	Known RBP	1.05	□□□□□ -2.24
NCL1	YBL024W	HSP150	P32478	413 aa		1.04	□□□□□ -2.24
NCL1	YBL024W	MRPL15	P36523	253 aa		1.04	□□□□□ -2.24
NCL1	YBL024W	GLC8	P41818	229 aa		1.04	□□□□□ -2.24
NCL1	YBL024W	YDR366C	P87287	132 aa		1.04	□□□□□ -2.24
NCL1	YBL024W	COF1	Q03048	143 aa	Known RBP	1.04	□□□□□ -2.24
NCL1	YBL024W	SCS22	Q6Q595	175 aa		1.04	□□□□□ -2.24
NCL1	YBL024W	ATG2	P53855	1592 aa		1.04	□□□□□ -2.24
NCL1	YBL024W	CYC2	P38909	366 aa		1.04	□□□□□ -2.24
NCL1	YBL024W	YEL014C	P39999	101 aa		1.04	□□□□□ -2.24
NCL1	YBL024W	FIT1	Q04433	528 aa		1.04	□□□□□ -2.24
NCL1	YBL024W	YPR203W	Q08994	102 aa		1.04	□□□□□ -2.24
NCL1	YBL024W	YPK9	Q12697	1472 aa		1.04	□□□□□ -2.24
NCL1	YBL024W	SUI1	P32911	108 aa	Known RBP	1.03	□□□□□ -2.24
NCL1	YBL024W	KEI1	Q06346	221 aa		1.03	□□□□□ -2.24
NCL1	YBL024W	YGL041W-A	P0C5N3	154 aa		1.03	□□□□□ -2.25
NCL1	YBL024W	YHL037C	P38733	133 aa		1.03	□□□□□ -2.25
NCL1	YBL024W	IPT1	P38954	527 aa		1.03	□□□□□ -2.25
NCL1	YBL024W	YGL230C	P53074	147 aa		1.03	□□□□□ -2.25
NCL1	YBL024W	TRS20	P38334	175 aa		1.02	□□□□□ -2.25
NCL1	YBL024W	YHR140W	P38842	239 aa		1.02	□□□□□ -2.25
NCL1	YBL024W	YGR039W	P53225	103 aa		1.02	□□□□□ -2.25
NCL1	YBL024W	HHO1	P53551	258 aa		1.02	□□□□□ -2.25
NCL1	YBL024W	ATP19	P81451	68 aa		1.02	□□□□□ -2.25
NCL1	YBL024W	VPS15	P22219	1454 aa		1.02	□□□□□ -2.25
NCL1	YBL024W	UFD4	P33202	1483 aa		1.01	□□□□□ -2.25
NCL1	YBL024W	COX5B	P00425	151 aa		1.01	□□□□□ -2.25
NCL1	YBL024W	YFL051C	P43552	160 aa		1.01	□□□□□ -2.25
NCL1	YBL024W	CSN9	Q03981	162 aa		1.01	□□□□□ -2.25
NCL1	YBL024W	SPC3	Q12133	184 aa		1.01	□□□□□ -2.25
NCL1	YBL024W	SKI3	P17883	1432 aa	Known RBP	1.01	□□□□□ -2.25
NCL1	YBL024W	KIN28	P06242	306 aa		1.01	□□□□□ -2.25
NCL1	YBL024W	CUP1-1	P0CX80	61 aa		1.01	□□□□□ -2.25
NCL1	YBL024W	CUP1-2	P0CX81	61 aa		1.01	□□□□□ -2.25
NCL1	YBL024W	PRE1	P22141	198 aa	Known RBP	1.01	□□□□□ -2.25
NCL1	YBL024W	YKR070W	P36151	352 aa	Known RBP	1.01	□□□□□ -2.25
NCL1	YBL024W	YCL001W-A	P87012	153 aa		1.01	□□□□□ -2.25
NCL1	YBL024W	YPR153W	Q06537	140 aa		1.01	□□□□□ -2.25
NCL1	YBL024W	UBR1	P19812	1950 aa		1.01	□□□□□ -2.25
NCL1	YBL024W	YGL204C	P53089	101 aa		1	□□□□□ -2.25
NCL1	YBL024W	FCY1	Q12178	158 aa		1	□□□□□ -2.25
NCL1	YBL024W	TRM732	Q03496	1420 aa		1	□□□□□ -2.25
NCL1	YBL024W	SCC2	Q04002	1493 aa		1	□□□□□ -2.25
NCL1	YBL024W	TOM1	Q03280	3268 aa		1	□□□□□ -2.25
NCL1	YBL024W	FYV5	P25585	152 aa		1	□□□□□ -2.25
NCL1	YBL024W	RPC19	P28000	142 aa	Known RBP	1	□□□□□ -2.25
NCL1	YBL024W	YBR027C	P38220	110 aa		1	□□□□□ -2.25
NCL1	YBL024W	YGR042W	P53227	271 aa		1	□□□□□ -2.25
NCL1	YBL024W	SPC2	Q04969	178 aa		1	□□□□□ -2.25
NCL1	YBL024W	GPI11	Q06636	219 aa		1	□□□□□ -2.25
NCL1	YBL024W	PDR10	P51533	1564 aa		0.99	□□□□□ -2.25
NCL1	YBL024W	YRF1-1	P0CX20	1796 aa		0.99	□□□□□ -2.25
NCL1	YBL024W	YRF1-5	P0CX21	1796 aa		0.99	□□□□□ -2.25
NCL1	YBL024W	YRF1-8	P0CX22	1796 aa		0.99	□□□□□ -2.25
NCL1	YBL024W	RPS1B	P23248	255 aa	Known RBP	0.99	□□□□□ -2.25

Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms