RNA–Protein interactions for RNA: YPL089C

RLM1, Transcript of MADS-box transcription factor, yeast

Gene RLM1, Length 2,031 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RLM1	YPL089C	LSM1	P47017	172 aa	Known RBP	0.93	□□□□□ -2.26
RLM1	YPL089C	BAT2	P47176	376 aa	Known RBP	0.93	□□□□□ -2.26
RLM1	YPL089C	CCC1	P47818	322 aa		0.93	□□□□□ -2.26
RLM1	YPL089C	YDR102C	Q03864	110 aa		0.93	□□□□□ -2.26
RLM1	YPL089C	PKR1	Q03880	122 aa	Known RBP	0.93	□□□□□ -2.26
RLM1	YPL089C	UPS3	Q04006	179 aa		0.93	□□□□□ -2.26
RLM1	YPL089C	YHP1	Q04116	353 aa		0.93	□□□□□ -2.26
RLM1	YPL089C	UPS1	Q05776	175 aa		0.93	□□□□□ -2.26
RLM1	YPL089C	ATG41	Q12048	136 aa		0.93	□□□□□ -2.26
RLM1	YPL089C	RPL13A	Q12690	199 aa	Predicted RBP	0.93	□□□□□ -2.26
RLM1	YPL089C	YOL162W	P0CF19	215 aa		0.93	□□□□□ -2.26
RLM1	YPL089C	MPM1	P40364	252 aa		0.93	□□□□□ -2.26
RLM1	YPL089C	FLX1	P40464	311 aa		0.93	□□□□□ -2.26
RLM1	YPL089C	ALB1	P47019	175 aa	Predicted RBP	0.93	□□□□□ -2.26
RLM1	YPL089C	YGL193C	P53097	103 aa		0.93	□□□□□ -2.26
RLM1	YPL089C	RRP17	Q04031	235 aa	Predicted RBP	0.93	□□□□□ -2.26
RLM1	YPL089C	YDR391C	Q04170	232 aa		0.93	□□□□□ -2.26
RLM1	YPL089C	MAK31	P23059	88 aa		0.92	□□□□□ -2.26
RLM1	YPL089C	RPB7	P34087	171 aa		0.92	□□□□□ -2.26
RLM1	YPL089C	YAP3	P38749	330 aa		0.92	□□□□□ -2.26
RLM1	YPL089C	IPI1	P38803	334 aa	Predicted RBP	0.92	□□□□□ -2.26
RLM1	YPL089C	HPA3	P39979	161 aa		0.92	□□□□□ -2.26
RLM1	YPL089C	SOK1	P40317	901 aa		0.92	□□□□□ -2.26
RLM1	YPL089C	PAC10	P48363	199 aa		0.92	□□□□□ -2.26
RLM1	YPL089C	LIP1	Q03579	150 aa		0.92	□□□□□ -2.26
RLM1	YPL089C	RAV2	Q03956	351 aa		0.92	□□□□□ -2.26
RLM1	YPL089C	STF2	P16965	84 aa		0.91	□□□□□ -2.26
RLM1	YPL089C	YER181C	P40097	107 aa		0.91	□□□□□ -2.26
RLM1	YPL089C	CCS1	P40202	249 aa	Known RBP	0.91	□□□□□ -2.26
RLM1	YPL089C	YJR015W	P47090	510 aa		0.91	□□□□□ -2.26
RLM1	YPL089C	RCE1	Q03530	315 aa		0.91	□□□□□ -2.26
RLM1	YPL089C	ATG10	Q07879	167 aa		0.91	□□□□□ -2.26
RLM1	YPL089C	HRD1	Q08109	551 aa		0.91	□□□□□ -2.26
RLM1	YPL089C	YNL146C-A	Q3E7Z1	64 aa		0.91	□□□□□ -2.26
RLM1	YPL089C	FPR1	P20081	114 aa	Known RBP	0.91	□□□□□ -2.26
RLM1	YPL089C	YPT31	P38555	223 aa	Known RBP	0.91	□□□□□ -2.26
RLM1	YPL089C	HYR1	P40581	163 aa	Known RBP	0.91	□□□□□ -2.26
RLM1	YPL089C	YJL218W	P40892	196 aa	Known RBP	0.91	□□□□□ -2.26
RLM1	YPL089C	YAE1	P47118	141 aa	Predicted RBP	0.91	□□□□□ -2.26
RLM1	YPL089C	YNR064C	P53750	290 aa		0.91	□□□□□ -2.26
RLM1	YPL089C	CWC27	Q02770	301 aa		0.91	□□□□□ -2.26
RLM1	YPL089C	ELP6	Q04868	273 aa		0.91	□□□□□ -2.26
RLM1	YPL089C	YMR320W	Q04897	101 aa		0.91	□□□□□ -2.26
RLM1	YPL089C	YPR114W	Q06107	315 aa		0.91	□□□□□ -2.26
RLM1	YPL089C	YPD1	Q07688	167 aa		0.91	□□□□□ -2.26
RLM1	YPL089C	YLR422W	Q06409	1932 aa		0.9	□□□□□ -2.26
RLM1	YPL089C	MRS4	P23500	304 aa		0.9	□□□□□ -2.27
RLM1	YPL089C	YHL042W	P38729	150 aa		0.9	□□□□□ -2.27
RLM1	YPL089C	YEL067C	P39978	195 aa		0.9	□□□□□ -2.27
RLM1	YPL089C	MOB1	P40484	314 aa		0.9	□□□□□ -2.27
RLM1	YPL089C	YML079W	Q03629	201 aa		0.9	□□□□□ -2.27
RLM1	YPL089C	YMR252C	Q04814	134 aa		0.9	□□□□□ -2.27
RLM1	YPL089C	UIP4	Q08926	304 aa		0.9	□□□□□ -2.27
RLM1	YPL089C	YMR030W-A	Q3E760	96 aa		0.9	□□□□□ -2.27
RLM1	YPL089C	SPS2	P08459	502 aa		0.89	□□□□□ -2.27
RLM1	YPL089C	SPT14	P32363	452 aa		0.89	□□□□□ -2.27
RLM1	YPL089C	YBL010C	P32788	280 aa		0.89	□□□□□ -2.27
RLM1	YPL089C	MRPL24	P36525	258 aa	Predicted RBP	0.89	□□□□□ -2.27
RLM1	YPL089C	YEL008W	P40001	126 aa		0.89	□□□□□ -2.27
RLM1	YPL089C	YDL241W	Q07738	123 aa		0.89	□□□□□ -2.27
RLM1	YPL089C	BEM2	P39960	2167 aa	Known RBP	0.89	□□□□□ -2.27
RLM1	YPL089C	CYR1	P08678	2026 aa	Known RBP	0.89	□□□□□ -2.27
RLM1	YPL089C	INO4	P13902	151 aa		0.89	□□□□□ -2.27
RLM1	YPL089C	SEN2	P16658	377 aa		0.89	□□□□□ -2.27
RLM1	YPL089C	PHO13	P19881	312 aa		0.89	□□□□□ -2.27
RLM1	YPL089C	ACP1	P32463	125 aa		0.89	□□□□□ -2.27
RLM1	YPL089C	YGR269W	P40326	108 aa		0.89	□□□□□ -2.27
RLM1	YPL089C	RBL2	P48606	106 aa	Known RBP	0.89	□□□□□ -2.27
RLM1	YPL089C	UBC7	Q02159	165 aa		0.89	□□□□□ -2.27
RLM1	YPL089C	YOR1	P53049	1477 aa		0.89	□□□□□ -2.27
RLM1	YPL089C	ETR1	P38071	380 aa		0.88	□□□□□ -2.27
RLM1	YPL089C	YGR201C	P42936	225 aa		0.88	□□□□□ -2.27
RLM1	YPL089C	YFL065C	P43539	102 aa		0.88	□□□□□ -2.27
RLM1	YPL089C	GEP7	P53171	287 aa		0.88	□□□□□ -2.27
RLM1	YPL089C	YDR366C	P87287	132 aa		0.88	□□□□□ -2.27
RLM1	YPL089C	MET31	Q03081	177 aa		0.88	□□□□□ -2.27
RLM1	YPL089C	YDL157C	Q12082	118 aa		0.88	□□□□□ -2.27
RLM1	YPL089C	MON2	P48563	1636 aa	Predicted RBP	0.88	□□□□□ -2.27
RLM1	YPL089C	DUR1,2	P32528	1835 aa	Known RBP	0.88	□□□□□ -2.27
RLM1	YPL089C	DDR48	P18899	430 aa	Known RBP	0.88	□□□□□ -2.27
RLM1	YPL089C	HSP12	P22943	109 aa	Known RBP	0.88	□□□□□ -2.27
RLM1	YPL089C	COF1	Q03048	143 aa	Known RBP	0.88	□□□□□ -2.27
RLM1	YPL089C	MZM1	Q03429	123 aa	Predicted RBP	0.88	□□□□□ -2.27
RLM1	YPL089C	RRT7	Q07829	113 aa		0.88	□□□□□ -2.27
RLM1	YPL089C	RFU1	Q08003	200 aa		0.88	□□□□□ -2.27
RLM1	YPL089C	RIB3	Q99258	208 aa		0.88	□□□□□ -2.27
RLM1	YPL089C	CYC2	P38909	366 aa		0.87	□□□□□ -2.27
RLM1	YPL089C	CIN5	P40917	295 aa		0.87	□□□□□ -2.27
RLM1	YPL089C	GPI2	P46961	280 aa		0.87	□□□□□ -2.27
RLM1	YPL089C	EST3	Q03096	181 aa		0.87	□□□□□ -2.27
RLM1	YPL089C	AVO2	Q04749	426 aa		0.87	□□□□□ -2.27
RLM1	YPL089C	COA3	Q3E7B2	85 aa		0.87	□□□□□ -2.27
RLM1	YPL089C	TAR1	Q8TGM6	124 aa		0.87	□□□□□ -2.27
RLM1	YPL089C	RPS25B	P0C0T4	108 aa	Known RBP	0.86	□□□□□ -2.27
RLM1	YPL089C	YCL042W	P25572	119 aa		0.86	□□□□□ -2.27
RLM1	YPL089C	SRP21	P32342	167 aa		0.86	□□□□□ -2.27
RLM1	YPL089C	CSN9	Q03981	162 aa		0.86	□□□□□ -2.27
RLM1	YPL089C	SPC2	Q04969	178 aa		0.86	□□□□□ -2.27
RLM1	YPL089C	RPS25A	Q3E792	108 aa	Predicted RBP	0.86	□□□□□ -2.27
RLM1	YPL089C	ADE6	P38972	1358 aa	Known RBP	0.86	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 28.9 ms