RNA–Protein interactions for RNA: YNL093W

YPT53, Transcript of Stress-induced Rab family GTPase, yeastyeast

Gene YPT53, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT53YNL093W CDC43P18898 376 aa3.31□□□□□ -1.88
YPT53YNL093W MRS4P23500 304 aa3.31□□□□□ -1.88
YPT53YNL093W LDB16P25587 256 aa3.31□□□□□ -1.88
YPT53YNL093W CSE2P33308 149 aa3.31□□□□□ -1.88
YPT53YNL093W SHE1P38200 338 aa3.31□□□□□ -1.88
YPT53YNL093W YAR029WP39549 74 aa3.31□□□□□ -1.88
YPT53YNL093W YJL218WP40892 196 aaKnown RBP3.31□□□□□ -1.88
YPT53YNL093W CUP9P41817 306 aa3.31□□□□□ -1.88
YPT53YNL093W YGL082WP53155 381 aa3.31□□□□□ -1.88
YPT53YNL093W YNL234WP53857 426 aa3.31□□□□□ -1.88
YPT53YNL093W UPS3Q04006 179 aa3.31□□□□□ -1.88
YPT53YNL093W YMR090WQ04304 227 aaKnown RBP3.31□□□□□ -1.88
YPT53YNL093W FIT3Q08907 204 aa3.31□□□□□ -1.88
YPT53YNL093W TDA8Q6B2U8 126 aa3.31□□□□□ -1.88
YPT53YNL093W IRC20Q06554 1556 aa3.3□□□□□ -1.88
YPT53YNL093W STU1P38198 1513 aa3.3□□□□□ -1.88
YPT53YNL093W MSW1P04803 379 aa3.3□□□□□ -1.88
YPT53YNL093W YPR170W-BP0C5R9 85 aa3.3□□□□□ -1.88
YPT53YNL093W VMA11P32842 164 aa3.3□□□□□ -1.88
YPT53YNL093W SSS1P35179 80 aa3.3□□□□□ -1.88
YPT53YNL093W YET1P35723 206 aa3.3□□□□□ -1.88
YPT53YNL093W PAM17P36147 197 aa3.3□□□□□ -1.88
YPT53YNL093W CCS1P40202 249 aaKnown RBP3.3□□□□□ -1.88
YPT53YNL093W AVT7P40501 490 aa3.3□□□□□ -1.88
YPT53YNL093W SNN1P48232 102 aa3.3□□□□□ -1.88
YPT53YNL093W SCW4P53334 386 aaKnown RBP3.3□□□□□ -1.88
YPT53YNL093W YPL039WQ03080 316 aa3.3□□□□□ -1.88
YPT53YNL093W PCL9Q12477 304 aa3.3□□□□□ -1.88
YPT53YNL093W YBL008W-AQ3E821 79 aa3.3□□□□□ -1.88
YPT53YNL093W DDP1Q99321 188 aaKnown RBP3.3□□□□□ -1.88
YPT53YNL093W YRF1-2P40105 1681 aa3.3□□□□□ -1.88
YPT53YNL093W YHR139C-AO13536 103 aa3.29□□□□□ -1.88
YPT53YNL093W RPS8AP0CX39 200 aaKnown RBP3.29□□□□□ -1.88
YPT53YNL093W RPS8BP0CX40 200 aaKnown RBP3.29□□□□□ -1.88
YPT53YNL093W RPL23AP0CX41 137 aaKnown RBP3.29□□□□□ -1.88
YPT53YNL093W RPL23BP0CX42 137 aaKnown RBP3.29□□□□□ -1.88
YPT53YNL093W YRA2P36036 203 aaKnown RBP RIP-Chip data3.29□□□□□ -1.88not detected
YPT53YNL093W LSM2P38203 95 aaKnown RBP3.29□□□□□ -1.88
YPT53YNL093W IRC22P40006 225 aa3.29□□□□□ -1.88
YPT53YNL093W SWM2P40342 146 aa3.29□□□□□ -1.88
YPT53YNL093W MPM1P40364 252 aa3.29□□□□□ -1.88
YPT53YNL093W CDC1P40986 491 aa3.29□□□□□ -1.88
YPT53YNL093W SWT21P53873 357 aaPredicted RBP3.29□□□□□ -1.88
YPT53YNL093W AAH1P53909 347 aa3.29□□□□□ -1.88
YPT53YNL093W SMD1Q02260 146 aaPredicted RBP3.29□□□□□ -1.88
YPT53YNL093W EST3Q03096 181 aa3.29□□□□□ -1.88
YPT53YNL093W YDR029WQ12111 104 aa3.29□□□□□ -1.88
YPT53YNL093W YPL245WQ12179 454 aaKnown RBP3.29□□□□□ -1.88
YPT53YNL093W ATG5Q12380 294 aa3.29□□□□□ -1.88
YPT53YNL093W YCR024C-BQ3E7Z8 88 aa3.29□□□□□ -1.88
YPT53YNL093W YFR032C-BQ8TGU2 87 aa3.29□□□□□ -1.88
YPT53YNL093W MED11Q99278 115 aa3.29□□□□□ -1.88
YPT53YNL093W HEM4P06174 275 aa3.28□□□□□ -1.88
YPT53YNL093W RPS14AP06367 137 aaKnown RBP3.28□□□□□ -1.88
YPT53YNL093W HSP12P22943 109 aaKnown RBP3.28□□□□□ -1.88
YPT53YNL093W YCR099CP25657 155 aa3.28□□□□□ -1.88
YPT53YNL093W AGA1P32323 725 aa3.28□□□□□ -1.88
YPT53YNL093W TMA19P35691 167 aaKnown RBP3.28□□□□□ -1.88
YPT53YNL093W GPX1P36014 167 aa3.28□□□□□ -1.88
YPT53YNL093W SMP1P38128 452 aa3.28□□□□□ -1.88
YPT53YNL093W HTD2P38790 280 aaKnown RBP3.28□□□□□ -1.88
YPT53YNL093W NSG1P38837 291 aa3.28□□□□□ -1.88
YPT53YNL093W RPS14BP39516 138 aaKnown RBP3.28□□□□□ -1.88
YPT53YNL093W EDC2P40023 145 aaPredicted RBP3.28□□□□□ -1.88
YPT53YNL093W SYS1P41544 203 aa3.28□□□□□ -1.88
YPT53YNL093W YMR252CQ04814 134 aa3.28□□□□□ -1.88
YPT53YNL093W COA6Q3E846 104 aa3.28□□□□□ -1.88
YPT53YNL093W KSH1Q8TGJ3 72 aa3.28□□□□□ -1.88
YPT53YNL093W ULS1Q08562 1619 aa3.28□□□□□ -1.88
YPT53YNL093W UTP10P42945 1769 aaKnown RBP3.28□□□□□ -1.89
YPT53YNL093W BPT1P14772 1559 aa3.27□□□□□ -1.89
YPT53YNL093W ECM12O13529 151 aa3.27□□□□□ -1.89
YPT53YNL093W PAI3P01094 68 aa3.27□□□□□ -1.89
YPT53YNL093W YFL015CP43578 164 aa3.27□□□□□ -1.89
YPT53YNL093W ERG25P53045 309 aa3.27□□□□□ -1.89
YPT53YNL093W SDS23P53172 527 aa3.27□□□□□ -1.89
YPT53YNL093W YPL278CQ08990 100 aa3.27□□□□□ -1.89
YPT53YNL093W CCH1P50077 2039 aa3.27□□□□□ -1.89
YPT53YNL093W ROM2P51862 1356 aaKnown RBP3.26□□□□□ -1.89
YPT53YNL093W ESP1Q03018 1630 aa3.26□□□□□ -1.89
YPT53YNL093W TRP1P00912 224 aa3.26□□□□□ -1.89
YPT53YNL093W PIS1P06197 220 aaKnown RBP3.26□□□□□ -1.89
YPT53YNL093W INO4P13902 151 aa3.26□□□□□ -1.89
YPT53YNL093W MAK32P23060 363 aa3.26□□□□□ -1.89
YPT53YNL093W URA10P30402 227 aa3.26□□□□□ -1.89
YPT53YNL093W SKI6P46948 246 aaPredicted RBP3.26□□□□□ -1.89
YPT53YNL093W EAF6P47128 113 aa3.26□□□□□ -1.89
YPT53YNL093W CLD1P53264 445 aa3.26□□□□□ -1.89
YPT53YNL093W YPR174CQ06616 221 aaPredicted RBP3.26□□□□□ -1.89
YPT53YNL093W YOL014WQ08110 124 aa3.26□□□□□ -1.89
YPT53YNL093W YML100W-AQ8TGT0 57 aa3.26□□□□□ -1.89
YPT53YNL093W TY3B-IQ7LHG5 1498 aaKnown RBP3.26□□□□□ -1.89
YPT53YNL093W YLR419WQ06698 1435 aaKnown RBP3.26□□□□□ -1.89
YPT53YNL093W POL1P13382 1468 aa3.25□□□□□ -1.89
YPT53YNL093W UBC4P15731 148 aa3.25□□□□□ -1.89
YPT53YNL093W YGL010WP25338 174 aa3.25□□□□□ -1.89
YPT53YNL093W IMP1P28627 190 aa3.25□□□□□ -1.89
YPT53YNL093W COX14P39103 70 aa3.25□□□□□ -1.89
YPT53YNL093W SPO73P40031 143 aa3.25□□□□□ -1.89
YPT53YNL093W YER134CP40081 178 aa3.25□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms