RNA–Protein interactions for RNA: YMR118C

SHH3, Transcript of Putative mitochondrial inner membrane protein of unknown function, yeastyeast

Gene SHH3, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH3YMR118C FIT3Q08907 204 aa2.94□□□□□ -1.94
SHH3YMR118C CSM4Q08955 156 aa2.94□□□□□ -1.94
SHH3YMR118C YPL257WQ08974 193 aa2.94□□□□□ -1.94
SHH3YMR118C PIN2Q12057 282 aa2.94□□□□□ -1.94
SHH3YMR118C RKI1Q12189 258 aa2.94□□□□□ -1.94
SHH3YMR118C POC4Q12245 148 aaPredicted RBP2.94□□□□□ -1.94
SHH3YMR118C GEP5Q12393 293 aa2.94□□□□□ -1.94
SHH3YMR118C YOR192C-CQ3E736 78 aa2.94□□□□□ -1.94
SHH3YMR118C RPP2AP05319 106 aaKnown RBP2.93□□□□□ -1.94
SHH3YMR118C SEC4P07560 215 aaKnown RBP2.93□□□□□ -1.94
SHH3YMR118C RPS16AP0CX51 143 aaKnown RBP2.93□□□□□ -1.94
SHH3YMR118C RPS16BP0CX52 143 aaKnown RBP2.93□□□□□ -1.94
SHH3YMR118C YHR214C-DP0CX93 97 aa2.93□□□□□ -1.94
SHH3YMR118C SEC11P15367 167 aa2.93□□□□□ -1.94
SHH3YMR118C ANB1P19211 157 aa2.93□□□□□ -1.94
SHH3YMR118C BET2P20133 325 aa2.93□□□□□ -1.94
SHH3YMR118C SAG1P20840 650 aa2.93□□□□□ -1.94
SHH3YMR118C RPI1P23250 407 aaKnown RBP2.93□□□□□ -1.94
SHH3YMR118C RPS2P25443 254 aaKnown RBP2.93□□□□□ -1.94
SHH3YMR118C IMP1P28627 190 aa2.93□□□□□ -1.94
SHH3YMR118C MRP49P32388 137 aa2.93□□□□□ -1.94
SHH3YMR118C ZRT1P32804 376 aa2.93□□□□□ -1.94
SHH3YMR118C SOF1P33750 489 aaKnown RBP2.93□□□□□ -1.94
SHH3YMR118C MCH2P36032 473 aa2.93□□□□□ -1.94
SHH3YMR118C SRX1P36077 127 aa2.93□□□□□ -1.94
SHH3YMR118C FYV4P38783 130 aaPredicted RBP2.93□□□□□ -1.94
SHH3YMR118C YHR138CP38841 114 aaPredicted RBP2.93□□□□□ -1.94
SHH3YMR118C BDH1P39714 382 aa2.93□□□□□ -1.94
SHH3YMR118C SEC72P39742 193 aaKnown RBP2.93□□□□□ -1.94
SHH3YMR118C HAC1P41546 238 aa2.93□□□□□ -1.94
SHH3YMR118C YJR015WP47090 510 aa2.93□□□□□ -1.94
SHH3YMR118C TDA4P47153 279 aa2.93□□□□□ -1.94
SHH3YMR118C TAF4P50105 388 aa2.93□□□□□ -1.94
SHH3YMR118C MIC27P50945 234 aa2.93□□□□□ -1.94
SHH3YMR118C YGL118CP53132 145 aa2.93□□□□□ -1.94
SHH3YMR118C PCP1P53259 346 aa2.93□□□□□ -1.94
SHH3YMR118C CPD1P53314 239 aa2.93□□□□□ -1.94
SHH3YMR118C WSC2P53832 503 aa2.93□□□□□ -1.94
SHH3YMR118C LPP1Q04396 274 aa2.93□□□□□ -1.94
SHH3YMR118C MSC3Q05812 728 aa2.93□□□□□ -1.94
SHH3YMR118C ATG39Q06159 398 aa2.93□□□□□ -1.94
SHH3YMR118C GRE1Q08969 168 aa2.93□□□□□ -1.94
SHH3YMR118C YPS3Q12303 508 aa2.93□□□□□ -1.94
SHH3YMR118C MPD1Q12404 318 aaKnown RBP2.93□□□□□ -1.94
SHH3YMR118C POM34Q12445 299 aa2.93□□□□□ -1.94
SHH3YMR118C BOL1Q3E793 110 aa2.93□□□□□ -1.94
SHH3YMR118C YLR302CO13544 120 aa2.92□□□□□ -1.94
SHH3YMR118C MBF1O14467 151 aaKnown RBP2.92□□□□□ -1.94
SHH3YMR118C CPR1P14832 162 aaKnown RBP2.92□□□□□ -1.94
SHH3YMR118C FEN2P25621 512 aaKnown RBP2.92□□□□□ -1.94
SHH3YMR118C ARO2P28777 376 aaKnown RBP2.92□□□□□ -1.94
SHH3YMR118C QRI5P32344 111 aa2.92□□□□□ -1.94
SHH3YMR118C RAD23P32628 398 aaKnown RBP2.92□□□□□ -1.94
SHH3YMR118C YKL097CP34245 136 aa2.92□□□□□ -1.94
SHH3YMR118C YBR090CP38253 122 aa2.92□□□□□ -1.94
SHH3YMR118C PSD1P39006 500 aa2.92□□□□□ -1.94
SHH3YMR118C GPP2P40106 250 aaKnown RBP2.92□□□□□ -1.94
SHH3YMR118C REE1P40893 198 aa2.92□□□□□ -1.94
SHH3YMR118C PGU1P47180 361 aa2.92□□□□□ -1.94
SHH3YMR118C DYN2Q02647 92 aa2.92□□□□□ -1.94
SHH3YMR118C GRH1Q04410 372 aaKnown RBP2.92□□□□□ -1.94
SHH3YMR118C ECM18Q04623 453 aa2.92□□□□□ -1.94
SHH3YMR118C UPS1Q05776 175 aa2.92□□□□□ -1.94
SHH3YMR118C YLR050CQ12155 161 aaKnown RBP2.92□□□□□ -1.94
SHH3YMR118C NCE102Q12207 173 aaRIP-Chip data2.92□□□□□ -1.94not detected
SHH3YMR118C YDL180WQ12301 547 aa2.92□□□□□ -1.94
SHH3YMR118C YLR363W-AQ3E747 85 aa2.92□□□□□ -1.94
SHH3YMR118C VPS63O13549 108 aa2.91□□□□□ -1.94
SHH3YMR118C COX1P00401 534 aa2.91□□□□□ -1.94
SHH3YMR118C PAI3P01094 68 aa2.91□□□□□ -1.94
SHH3YMR118C YPT1P01123 206 aaKnown RBP2.91□□□□□ -1.94
SHH3YMR118C NOP1P15646 327 aaKnown RBP2.91□□□□□ -1.94
SHH3YMR118C HSP12P22943 109 aaKnown RBP2.91□□□□□ -1.94
SHH3YMR118C ROX3P25046 220 aa2.91□□□□□ -1.94
SHH3YMR118C IMG2P25642 146 aaPredicted RBP2.91□□□□□ -1.94
SHH3YMR118C YKR070WP36151 352 aaKnown RBP2.91□□□□□ -1.94
SHH3YMR118C ICS2P38284 255 aa2.91□□□□□ -1.94
SHH3YMR118C SAS2P40963 338 aa2.91□□□□□ -1.94
SHH3YMR118C UBC13P52490 153 aa2.91□□□□□ -1.94
SHH3YMR118C YGR017WP53210 297 aa2.91□□□□□ -1.94
SHH3YMR118C COX18P53239 316 aa2.91□□□□□ -1.94
SHH3YMR118C SSU72P53538 206 aaPredicted RBP2.91□□□□□ -1.94
SHH3YMR118C ATP19P81451 68 aa2.91□□□□□ -1.94
SHH3YMR118C ATG21Q02887 496 aa2.91□□□□□ -1.94
SHH3YMR118C SDC1Q03323 175 aa2.91□□□□□ -1.94
SHH3YMR118C YML079WQ03629 201 aa2.91□□□□□ -1.94
SHH3YMR118C ADH6Q04894 360 aaKnown RBP2.91□□□□□ -1.94
SHH3YMR118C YPR098CQ06089 161 aa2.91□□□□□ -1.94
SHH3YMR118C YGL258W-AQ3E740 77 aa2.91□□□□□ -1.94
SHH3YMR118C SLO1Q3E784 85 aa2.91□□□□□ -1.94
SHH3YMR118C SCS22Q6Q595 175 aa2.91□□□□□ -1.94
SHH3YMR118C YMR316C-AI2HB70 103 aa2.9□□□□□ -1.95
SHH3YMR118C YFL068WP0CX99 160 aa2.9□□□□□ -1.95
SHH3YMR118C YLL066W-AP0CY00 160 aa2.9□□□□□ -1.95
SHH3YMR118C YLL067W-AP0CY01 160 aa2.9□□□□□ -1.95
SHH3YMR118C MRS3P10566 314 aa2.9□□□□□ -1.95
SHH3YMR118C TIR1P10863 254 aa2.9□□□□□ -1.95
SHH3YMR118C YMR31P19955 123 aa2.9□□□□□ -1.95
SHH3YMR118C TOM40P23644 387 aaKnown RBP2.9□□□□□ -1.95
SHH3YMR118C YCR006CP25350 157 aa2.9□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 64.7 ms