RNA–Protein interactions for RNA: YML112W

CTK3, Transcript of Gamma subunit of C-terminal domain kinase I, yeastyeast

Gene CTK3, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK3YML112W HHO1P53551 258 aa0.96□□□□□ -2.26
CTK3YML112W DID2P69771 204 aa0.96□□□□□ -2.26
CTK3YML112W COF1Q03048 143 aaKnown RBP0.96□□□□□ -2.26
CTK3YML112W SDH7Q04401 133 aa0.96□□□□□ -2.26
CTK3YML112W FCY1Q12178 158 aa0.96□□□□□ -2.26
CTK3YML112W FYV7Q12247 151 aa0.96□□□□□ -2.26
CTK3YML112W DGK1Q12382 290 aa0.96□□□□□ -2.26
CTK3YML112W TSC3Q3E790 80 aa0.96□□□□□ -2.26
CTK3YML112W YCL001W-BQ96VH2 84 aa0.96□□□□□ -2.26
CTK3YML112W DUR1,2P32528 1835 aaKnown RBP0.96□□□□□ -2.26
CTK3YML112W REV3P14284 1504 aa0.95□□□□□ -2.26
CTK3YML112W FMP49A0A023PZB3 126 aa0.95□□□□□ -2.26
CTK3YML112W PBI2P0CT04 75 aaKnown RBP0.95□□□□□ -2.26
CTK3YML112W FZF1P32805 299 aa0.95□□□□□ -2.26
CTK3YML112W SHE2P36068 246 aaKnown RBP RIP-Chip data0.95□□□□□ -2.26not detected
CTK3YML112W YBR242WP38331 238 aa0.95□□□□□ -2.26
CTK3YML112W GAT4P40569 121 aa0.95□□□□□ -2.26
CTK3YML112W AIF1P52923 378 aa0.95□□□□□ -2.26
CTK3YML112W PGA1P53896 198 aa0.95□□□□□ -2.26
CTK3YML112W YNL010WP53981 241 aaKnown RBP0.95□□□□□ -2.26
CTK3YML112W SAE3P89114 91 aa0.95□□□□□ -2.26
CTK3YML112W CWC27Q02770 301 aa0.95□□□□□ -2.26
CTK3YML112W TMA23Q03525 211 aa0.95□□□□□ -2.26
CTK3YML112W HPT1Q04178 221 aaKnown RBP0.95□□□□□ -2.26
CTK3YML112W LPP1Q04396 274 aa0.95□□□□□ -2.26
CTK3YML112W YPR114WQ06107 315 aa0.95□□□□□ -2.26
CTK3YML112W YLR118CQ12354 227 aa0.95□□□□□ -2.26
CTK3YML112W MPD1Q12404 318 aaKnown RBP0.95□□□□□ -2.26
CTK3YML112W YDL085C-AQ3E7B7 68 aaKnown RBP0.95□□□□□ -2.26
CTK3YML112W YNL277W-AQ3E7Z0 62 aa0.95□□□□□ -2.26
CTK3YML112W YML100W-AQ8TGT0 57 aa0.95□□□□□ -2.26
CTK3YML112W VAR1P02381 398 aa0.94□□□□□ -2.26
CTK3YML112W HAP2P06774 265 aa0.94□□□□□ -2.26
CTK3YML112W YLR156WP0CE96 114 aa0.94□□□□□ -2.26
CTK3YML112W YLR159WP0CE97 114 aa0.94□□□□□ -2.26
CTK3YML112W YLR161WP0CE98 114 aa0.94□□□□□ -2.26
CTK3YML112W SRP21P32342 167 aa0.94□□□□□ -2.26
CTK3YML112W SEC17P32602 292 aa0.94□□□□□ -2.26
CTK3YML112W YRA2P36036 203 aaKnown RBP RIP-Chip data0.94□□□□□ -2.26not detected
CTK3YML112W AIM18P38884 321 aa0.94□□□□□ -2.26
CTK3YML112W VMA7P39111 118 aa0.94□□□□□ -2.26
CTK3YML112W MOB1P40484 314 aa0.94□□□□□ -2.26
CTK3YML112W YFL019CP43576 117 aa0.94□□□□□ -2.26
CTK3YML112W TTI2P47168 421 aa0.94□□□□□ -2.26
CTK3YML112W PAC10P48363 199 aa0.94□□□□□ -2.26
CTK3YML112W RPS12P48589 143 aaKnown RBP0.94□□□□□ -2.26
CTK3YML112W SBH1P52870 82 aa0.94□□□□□ -2.26
CTK3YML112W YGL230CP53074 147 aa0.94□□□□□ -2.26
CTK3YML112W DIG2Q03373 323 aaKnown RBP0.94□□□□□ -2.26
CTK3YML112W NAT3Q06504 195 aa0.94□□□□□ -2.26
CTK3YML112W MCP1Q12106 302 aa0.94□□□□□ -2.26
CTK3YML112W YDL180WQ12301 547 aa0.94□□□□□ -2.26
CTK3YML112W OCA6Q12454 224 aa0.94□□□□□ -2.26
CTK3YML112W SPP41P38904 1435 aa0.94□□□□□ -2.26
CTK3YML112W YSP2Q06681 1438 aa0.93□□□□□ -2.26
CTK3YML112W ATP5P09457 212 aa0.93□□□□□ -2.26
CTK3YML112W UBC5P15732 148 aa0.93□□□□□ -2.26
CTK3YML112W PHO85P17157 305 aa0.93□□□□□ -2.26
CTK3YML112W SEC59P20048 519 aa0.93□□□□□ -2.26
CTK3YML112W ATP15P21306 62 aa0.93□□□□□ -2.26
CTK3YML112W MRS4P23500 304 aa0.93□□□□□ -2.26
CTK3YML112W RPL14AP36105 138 aaKnown RBP0.93□□□□□ -2.26
CTK3YML112W SHB17P36136 271 aaKnown RBP0.93□□□□□ -2.26
CTK3YML112W SRL3P36167 246 aa0.93□□□□□ -2.26
CTK3YML112W RPL14BP38754 138 aaKnown RBP0.93□□□□□ -2.26
CTK3YML112W FYV4P38783 130 aaPredicted RBP0.93□□□□□ -2.26
CTK3YML112W DLS1P40366 167 aa0.93□□□□□ -2.26
CTK3YML112W GPI2P46961 280 aa0.93□□□□□ -2.26
CTK3YML112W YAE1P47118 141 aaPredicted RBP0.93□□□□□ -2.26
CTK3YML112W DIE2P50076 525 aa0.93□□□□□ -2.26
CTK3YML112W YGR017WP53210 297 aa0.93□□□□□ -2.26
CTK3YML112W TIM13P53299 105 aa0.93□□□□□ -2.26
CTK3YML112W APS2Q00381 147 aa0.93□□□□□ -2.26
CTK3YML112W EST3Q03096 181 aa0.93□□□□□ -2.26
CTK3YML112W YMR099CQ03161 297 aaKnown RBP0.93□□□□□ -2.26
CTK3YML112W NHP10Q03435 203 aa0.93□□□□□ -2.26
CTK3YML112W GAL83Q04739 417 aa0.93□□□□□ -2.26
CTK3YML112W UPS1Q05776 175 aa0.93□□□□□ -2.26
CTK3YML112W CNL1Q06333 122 aa0.93□□□□□ -2.26
CTK3YML112W SCP1Q08873 200 aa0.93□□□□□ -2.26
CTK3YML112W YOR214CQ12282 236 aa0.93□□□□□ -2.26
CTK3YML112W HUT1Q12520 339 aa0.93□□□□□ -2.26
CTK3YML112W YOR376W-AQ3E805 51 aa0.93□□□□□ -2.26
CTK3YML112W YPR014CQ6B0W2 109 aa0.93□□□□□ -2.26
CTK3YML112W HAP3P13434 144 aa0.92□□□□□ -2.26
CTK3YML112W RPB3P16370 318 aaKnown RBP0.92□□□□□ -2.26
CTK3YML112W MAG1P22134 296 aaKnown RBP0.92□□□□□ -2.26
CTK3YML112W AHT1P29589 182 aa0.92□□□□□ -2.26
CTK3YML112W YET1P35723 206 aa0.92□□□□□ -2.26
CTK3YML112W YPT31P38555 223 aaKnown RBP0.92□□□□□ -2.26
CTK3YML112W HTD2P38790 280 aaKnown RBP0.92□□□□□ -2.26
CTK3YML112W YEL028WP39989 153 aa0.92□□□□□ -2.26
CTK3YML112W YER181CP40097 107 aa0.92□□□□□ -2.26
CTK3YML112W CCS1P40202 249 aaKnown RBP0.92□□□□□ -2.26
CTK3YML112W GEP7P53171 287 aa0.92□□□□□ -2.26
CTK3YML112W YGR039WP53225 103 aa0.92□□□□□ -2.26
CTK3YML112W YNL033WP53964 284 aa0.92□□□□□ -2.26
CTK3YML112W YNL019CP53975 284 aa0.92□□□□□ -2.26
CTK3YML112W AIM11P87275 137 aa0.92□□□□□ -2.26
CTK3YML112W YDR274CP87283 123 aa0.92□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 116.9 ms