RNA–Protein interactions for RNA: YML103C

NUP188, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeast

Gene NUP188, Length 4,968 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP188	YML103C	MPC1	P53157	130 aa	Known RBP	0.84	□□□□□ -2.27
NUP188	YML103C	GAL83	Q04739	417 aa		0.84	□□□□□ -2.27
NUP188	YML103C	UBI4	P0CG63	381 aa	Known RBP	0.84	□□□□□ -2.27
NUP188	YML103C	HYR1	P40581	163 aa	Known RBP	0.84	□□□□□ -2.27
NUP188	YML103C	YJL027C	P47063	138 aa	Predicted RBP	0.84	□□□□□ -2.27
NUP188	YML103C	MPC3	P53311	146 aa		0.84	□□□□□ -2.27
NUP188	YML103C	HHO1	P53551	258 aa		0.84	□□□□□ -2.27
NUP188	YML103C	YDC1	Q02896	317 aa		0.84	□□□□□ -2.27
NUP188	YML103C	COF1	Q03048	143 aa	Known RBP	0.84	□□□□□ -2.27
NUP188	YML103C	PIR1	Q03178	341 aa		0.84	□□□□□ -2.27
NUP188	YML103C	DIG2	Q03373	323 aa	Known RBP	0.84	□□□□□ -2.27
NUP188	YML103C	RPL30	P14120	105 aa	Known RBP	0.84	□□□□□ -2.28
NUP188	YML103C	THG1	P53215	237 aa	Known RBP	0.84	□□□□□ -2.28
NUP188	YML103C	CNL1	Q06333	122 aa		0.84	□□□□□ -2.28
NUP188	YML103C	AHT1	P29589	182 aa		0.84	□□□□□ -2.28
NUP188	YML103C	UPS2	P35200	230 aa		0.84	□□□□□ -2.28
NUP188	YML103C	HTD2	P38790	280 aa	Known RBP	0.84	□□□□□ -2.28
NUP188	YML103C	DAN1	P47178	298 aa		0.84	□□□□□ -2.28
NUP188	YML103C	YOR1	P53049	1477 aa		0.83	□□□□□ -2.28
NUP188	YML103C	YOL162W	P0CF19	215 aa		0.83	□□□□□ -2.28
NUP188	YML103C	PET54	P10834	293 aa		0.83	□□□□□ -2.28
NUP188	YML103C	UBC8	P28263	218 aa		0.83	□□□□□ -2.28
NUP188	YML103C	PAM17	P36147	197 aa		0.83	□□□□□ -2.28
NUP188	YML103C	SBH1	P52870	82 aa		0.83	□□□□□ -2.28
NUP188	YML103C	YHP1	Q04116	353 aa		0.83	□□□□□ -2.28
NUP188	YML103C	GRE1	Q08969	168 aa		0.83	□□□□□ -2.28
NUP188	YML103C	PRE1	P22141	198 aa	Known RBP	0.83	□□□□□ -2.28
NUP188	YML103C	UPS3	Q04006	179 aa		0.83	□□□□□ -2.28
NUP188	YML103C	RPL2A	P0CX45	254 aa	Known RBP	0.83	□□□□□ -2.28
NUP188	YML103C	RPL2B	P0CX46	254 aa	Known RBP	0.83	□□□□□ -2.28
NUP188	YML103C	RPB7	P34087	171 aa		0.83	□□□□□ -2.28
NUP188	YML103C	YPT31	P38555	223 aa	Known RBP	0.83	□□□□□ -2.28
NUP188	YML103C	YGR269W	P40326	108 aa		0.83	□□□□□ -2.28
NUP188	YML103C	NKP2	Q06162	153 aa		0.83	□□□□□ -2.28
NUP188	YML103C	CCH1	P50077	2039 aa		0.82	□□□□□ -2.28
NUP188	YML103C	HSP12	P22943	109 aa	Known RBP	0.82	□□□□□ -2.28
NUP188	YML103C	SHB17	P36136	271 aa	Known RBP	0.82	□□□□□ -2.28
NUP188	YML103C	MRPL24	P36525	258 aa	Predicted RBP	0.82	□□□□□ -2.28
NUP188	YML103C	YHL018W	P38744	120 aa	Predicted RBP	0.82	□□□□□ -2.28
NUP188	YML103C	FYV4	P38783	130 aa	Predicted RBP	0.82	□□□□□ -2.28
NUP188	YML103C	CIN5	P40917	295 aa		0.82	□□□□□ -2.28
NUP188	YML103C	GLC8	P41818	229 aa		0.82	□□□□□ -2.28
NUP188	YML103C	LSM8	P47093	109 aa	Known RBP	0.82	□□□□□ -2.28
NUP188	YML103C	YGL204C	P53089	101 aa		0.82	□□□□□ -2.28
NUP188	YML103C	YDR102C	Q03864	110 aa		0.82	□□□□□ -2.28
NUP188	YML103C	ATG41	Q12048	136 aa		0.82	□□□□□ -2.28
NUP188	YML103C	PST2	Q12335	198 aa	Known RBP	0.82	□□□□□ -2.28
NUP188	YML103C	ADE6	P38972	1358 aa	Known RBP	0.82	□□□□□ -2.28
NUP188	YML103C	COX8	P04039	78 aa		0.82	□□□□□ -2.28
NUP188	YML103C	STF2	P16965	84 aa		0.82	□□□□□ -2.28
NUP188	YML103C	PHO13	P19881	312 aa		0.82	□□□□□ -2.28
NUP188	YML103C	SLM6	P38343	150 aa		0.82	□□□□□ -2.28
NUP188	YML103C	VMA22	P38784	181 aa		0.82	□□□□□ -2.28
NUP188	YML103C	CCS1	P40202	249 aa	Known RBP	0.82	□□□□□ -2.28
NUP188	YML103C	GPI2	P46961	280 aa		0.82	□□□□□ -2.28
NUP188	YML103C	YNR077C	P53758	84 aa		0.82	□□□□□ -2.28
NUP188	YML103C	IGO1	P53897	168 aa		0.82	□□□□□ -2.28
NUP188	YML103C	SDH7	Q04401	133 aa		0.82	□□□□□ -2.28
NUP188	YML103C	YNL146C-A	Q3E7Z1	64 aa		0.82	□□□□□ -2.28
NUP188	YML103C	SCS22	Q6Q595	175 aa		0.82	□□□□□ -2.28
NUP188	YML103C	MED11	Q99278	115 aa		0.82	□□□□□ -2.28
NUP188	YML103C	SUA7	P29055	345 aa	Predicted RBP	0.82	□□□□□ -2.28
NUP188	YML103C	YPR114W	Q06107	315 aa		0.82	□□□□□ -2.28
NUP188	YML103C	YLR162W	Q06235	118 aa		0.82	□□□□□ -2.28
NUP188	YML103C	YDL157C	Q12082	118 aa		0.82	□□□□□ -2.28
NUP188	YML103C	YIL177C	P40434	1758 aa		0.82	□□□□□ -2.28
NUP188	YML103C	YJL225C	P40889	1758 aa		0.82	□□□□□ -2.28
NUP188	YML103C	YGL041W-A	P0C5N3	154 aa		0.81	□□□□□ -2.28
NUP188	YML103C	SUI1	P32911	108 aa	Known RBP	0.81	□□□□□ -2.28
NUP188	YML103C	NMA1	Q06178	401 aa	Known RBP	0.81	□□□□□ -2.28
NUP188	YML103C	FKS1	P38631	1876 aa	Known RBP	0.81	□□□□□ -2.28
NUP188	YML103C	INO4	P13902	151 aa		0.81	□□□□□ -2.28
NUP188	YML103C	SRP21	P32342	167 aa		0.81	□□□□□ -2.28
NUP188	YML103C	YGL230C	P53074	147 aa		0.81	□□□□□ -2.28
NUP188	YML103C	GEP7	P53171	287 aa		0.81	□□□□□ -2.28
NUP188	YML103C	ORM1	P53224	222 aa		0.81	□□□□□ -2.28
NUP188	YML103C	UBC7	Q02159	165 aa		0.81	□□□□□ -2.28
NUP188	YML103C	KTI11	Q3E840	82 aa		0.81	□□□□□ -2.28
NUP188	YML103C	FLO9	P39712	1322 aa		0.81	□□□□□ -2.28
NUP188	YML103C	YGR201C	P42936	225 aa		0.81	□□□□□ -2.28
NUP188	YML103C	BAT2	P47176	376 aa	Known RBP	0.81	□□□□□ -2.28
NUP188	YML103C	FMN1	Q03778	218 aa		0.81	□□□□□ -2.28
NUP188	YML103C	UPS1	Q05776	175 aa		0.81	□□□□□ -2.28
NUP188	YML103C	NHP6A	P11632	93 aa	Known RBP	0.81	□□□□□ -2.28
NUP188	YML103C	MRPL44	P19956	98 aa		0.81	□□□□□ -2.28
NUP188	YML103C	YEL028W	P39989	153 aa		0.81	□□□□□ -2.28
NUP188	YML103C	YMR007W	Q03675	126 aa		0.81	□□□□□ -2.28
NUP188	YML103C	RNH202	Q05635	350 aa		0.81	□□□□□ -2.28
NUP188	YML103C	KEI1	Q06346	221 aa		0.81	□□□□□ -2.28
NUP188	YML103C	FPR1	P20081	114 aa	Known RBP	0.8	□□□□□ -2.28
NUP188	YML103C	ECM31	P38122	312 aa		0.8	□□□□□ -2.28
NUP188	YML103C	FIP1	P45976	327 aa		0.8	□□□□□ -2.28
NUP188	YML103C	YBR219C	P38317	127 aa		0.8	□□□□□ -2.28
NUP188	YML103C	CYC2	P38909	366 aa		0.8	□□□□□ -2.28
NUP188	YML103C	DDR48	P18899	430 aa	Known RBP	0.8	□□□□□ -2.28
NUP188	YML103C	YNL019C	P53975	284 aa		0.8	□□□□□ -2.28
NUP188	YML103C	DYN2	Q02647	92 aa		0.8	□□□□□ -2.28
NUP188	YML103C	ELC1	Q03071	99 aa		0.8	□□□□□ -2.28
NUP188	YML103C	RIM9	Q04734	239 aa		0.8	□□□□□ -2.28
NUP188	YML103C	FYV12	Q08559	129 aa		0.8	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms