RNA–Protein interactions for RNA: YLR397C

AFG2, Transcript of ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex, yeast

Gene AFG2, Length 2,343 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AFG2	YLR397C	YTH1	Q06102	208 aa	Predicted RBP	6.28	□□□□□ -1.4
AFG2	YLR397C	OPI3	P05375	206 aa		6.27	□□□□□ -1.41
AFG2	YLR397C	CPR2	P23285	205 aa		6.27	□□□□□ -1.41
AFG2	YLR397C	FRM2	P37261	193 aa		6.27	□□□□□ -1.41
AFG2	YLR397C	YBR184W	P38299	523 aa		6.27	□□□□□ -1.41
AFG2	YLR397C	YJR096W	P47137	282 aa		6.27	□□□□□ -1.41
AFG2	YLR397C	SWT21	P53873	357 aa	Predicted RBP	6.27	□□□□□ -1.41
AFG2	YLR397C	YPQ1	Q12010	308 aa		6.27	□□□□□ -1.41
AFG2	YLR397C	BET2	P20133	325 aa		6.27	□□□□□ -1.41
AFG2	YLR397C	YNL200C	P40165	246 aa	Known RBP	6.27	□□□□□ -1.41
AFG2	YLR397C	BAT2	P47176	376 aa	Known RBP	6.27	□□□□□ -1.41
AFG2	YLR397C	LPP1	Q04396	274 aa		6.27	□□□□□ -1.41
AFG2	YLR397C	YDR029W	Q12111	104 aa		6.27	□□□□□ -1.41
AFG2	YLR397C	CDC39	P25655	2108 aa	Known RBP	6.26	□□□□□ -1.41
AFG2	YLR397C	ATG21	Q02887	496 aa		6.26	□□□□□ -1.41
AFG2	YLR397C	CDC26	P14724	124 aa		6.26	□□□□□ -1.41
AFG2	YLR397C	UBC5	P15732	148 aa		6.26	□□□□□ -1.41
AFG2	YLR397C	VMA11	P32842	164 aa		6.26	□□□□□ -1.41
AFG2	YLR397C	POM34	Q12445	299 aa		6.26	□□□□□ -1.41
AFG2	YLR397C	VPS63	O13549	108 aa		6.25	□□□□□ -1.41
AFG2	YLR397C	RFA3	P26755	122 aa	Known RBP	6.25	□□□□□ -1.41
AFG2	YLR397C	OM14	P38325	134 aa		6.25	□□□□□ -1.41
AFG2	YLR397C	YNR040W	P53736	256 aa		6.25	□□□□□ -1.41
AFG2	YLR397C	PIR3	Q03180	325 aa		6.25	□□□□□ -1.41
AFG2	YLR397C	YPR096C	O13587	100 aa		6.25	□□□□□ -1.41
AFG2	YLR397C	AHT1	P29589	182 aa		6.25	□□□□□ -1.41
AFG2	YLR397C	YJL193W	P39542	402 aa		6.25	□□□□□ -1.41
AFG2	YLR397C	YIL163C	P40448	117 aa		6.25	□□□□□ -1.41
AFG2	YLR397C	BRR6	P53062	197 aa		6.25	□□□□□ -1.41
AFG2	YLR397C	YNR021W	P53723	404 aa	Known RBP	6.25	□□□□□ -1.41
AFG2	YLR397C	RIM9	Q04734	239 aa		6.25	□□□□□ -1.41
AFG2	YLR397C	YLR042C	Q07990	161 aa		6.25	□□□□□ -1.41
AFG2	YLR397C	YOR105W	Q08504	108 aa		6.25	□□□□□ -1.41
AFG2	YLR397C	YPR011C	Q12251	326 aa		6.25	□□□□□ -1.41
AFG2	YLR397C	YDR461C-A	Q2V2P7	80 aa		6.25	□□□□□ -1.41
AFG2	YLR397C	YDR157W	A0A023PZE8	133 aa		6.24	□□□□□ -1.41
AFG2	YLR397C	COX9	P07255	59 aa		6.24	□□□□□ -1.41
AFG2	YLR397C	FUN19	P28003	413 aa	Predicted RBP	6.24	□□□□□ -1.41
AFG2	YLR397C	SPC29	P33419	253 aa		6.24	□□□□□ -1.41
AFG2	YLR397C	SCW4	P53334	386 aa	Known RBP	6.24	□□□□□ -1.41
AFG2	YLR397C	YNR071C	P53757	342 aa		6.24	□□□□□ -1.41
AFG2	YLR397C	SOD1	P00445	154 aa	Known RBP	6.24	□□□□□ -1.41
AFG2	YLR397C	CHO1	P08456	276 aa		6.24	□□□□□ -1.41
AFG2	YLR397C	UBA3	Q99344	299 aa		6.24	□□□□□ -1.41
AFG2	YLR397C	YDR042C	Q03205	200 aa		6.23	□□□□□ -1.41
AFG2	YLR397C	YKL183C-A	Q3E765	70 aa		6.23	□□□□□ -1.41
AFG2	YLR397C	ECM34	P38728	170 aa		6.22	□□□□□ -1.41
AFG2	YLR397C	YJL007C	P47080	104 aa		6.22	□□□□□ -1.41
AFG2	YLR397C	TDA4	P47153	279 aa		6.22	□□□□□ -1.41
AFG2	YLR397C	ERG13	P54839	491 aa	Known RBP	6.22	□□□□□ -1.41
AFG2	YLR397C	VPS71	Q03433	280 aa		6.22	□□□□□ -1.41
AFG2	YLR397C	AYT1	Q12226	474 aa		6.22	□□□□□ -1.41
AFG2	YLR397C	YOR029W	Q12243	111 aa		6.22	□□□□□ -1.41
AFG2	YLR397C	NPC2	Q12408	173 aa		6.22	□□□□□ -1.41
AFG2	YLR397C	PRP46	Q12417	451 aa	Predicted RBP	6.22	□□□□□ -1.41
AFG2	YLR397C	NHP2	P32495	156 aa	Predicted RBP	6.22	□□□□□ -1.41
AFG2	YLR397C	YKR041W	P36134	250 aa		6.22	□□□□□ -1.41
AFG2	YLR397C	GZF3	P42944	551 aa	Known RBP	6.22	□□□□□ -1.41
AFG2	YLR397C	MSO1	P53604	210 aa	Known RBP	6.22	□□□□□ -1.41
AFG2	YLR397C	USV1	Q12132	391 aa		6.22	□□□□□ -1.41
AFG2	YLR397C	DFM1	Q12743	341 aa	Known RBP	6.22	□□□□□ -1.41
AFG2	YLR397C	MDH2	P22133	377 aa		6.21	□□□□□ -1.41
AFG2	YLR397C	LCB3	P47013	409 aa		6.21	□□□□□ -1.41
AFG2	YLR397C	YPL039W	Q03080	316 aa		6.21	□□□□□ -1.41
AFG2	YLR397C	YAR068W	P39564	161 aa		6.21	□□□□□ -1.42
AFG2	YLR397C	MIC27	P50945	234 aa		6.21	□□□□□ -1.42
AFG2	YLR397C	CRH1	P53301	507 aa		6.21	□□□□□ -1.42
AFG2	YLR397C	POP3	P53833	195 aa	Predicted RBP	6.21	□□□□□ -1.42
AFG2	YLR397C	YMR178W	Q03219	274 aa	Known RBP	6.21	□□□□□ -1.42
AFG2	YLR397C	MSA1	Q08471	629 aa		6.21	□□□□□ -1.42
AFG2	YLR397C	YDR119W-A	Q2V2P9	66 aa		6.21	□□□□□ -1.42
AFG2	YLR397C	YMR316C-A	I2HB70	103 aa		6.2	□□□□□ -1.42
AFG2	YLR397C	RPS13	P05756	151 aa	Known RBP	6.2	□□□□□ -1.42
AFG2	YLR397C	MSI1	P13712	422 aa		6.2	□□□□□ -1.42
AFG2	YLR397C	DUT1	P33317	147 aa		6.2	□□□□□ -1.42
AFG2	YLR397C	YNL194C	P40169	301 aa		6.2	□□□□□ -1.42
AFG2	YLR397C	CDC1	P40986	491 aa		6.2	□□□□□ -1.42
AFG2	YLR397C	YML079W	Q03629	201 aa		6.2	□□□□□ -1.42
AFG2	YLR397C	YAL063C-A	Q3E791	96 aa		6.2	□□□□□ -1.42
AFG2	YLR397C	ANS1	P38832	159 aa		6.2	□□□□□ -1.42
AFG2	YLR397C	BUD8	P41698	603 aa		6.2	□□□□□ -1.42
AFG2	YLR397C	AQR1	P53943	586 aa		6.2	□□□□□ -1.42
AFG2	YLR397C	RRG8	Q06109	277 aa		6.2	□□□□□ -1.42
AFG2	YLR397C	FYV4	P38783	130 aa	Predicted RBP	6.19	□□□□□ -1.42
AFG2	YLR397C	EFM6	P53970	246 aa		6.19	□□□□□ -1.42
AFG2	YLR397C	FIT3	Q08907	204 aa		6.19	□□□□□ -1.42
AFG2	YLR397C	ENV10	Q99382	181 aa		6.19	□□□□□ -1.42
AFG2	YLR397C	YCR085W	P25650	117 aa		6.19	□□□□□ -1.42
AFG2	YLR397C	MLF3	P32047	452 aa		6.19	□□□□□ -1.42
AFG2	YLR397C	CYB5	P40312	120 aa		6.19	□□□□□ -1.42
AFG2	YLR397C	YDL186W	P48568	277 aa		6.19	□□□□□ -1.42
AFG2	YLR397C	RPL34A	P87262	121 aa	Predicted RBP	6.19	□□□□□ -1.42
AFG2	YLR397C	ABF2	Q02486	183 aa		6.19	□□□□□ -1.42
AFG2	YLR397C	GPI19	Q04082	140 aa		6.19	□□□□□ -1.42
AFG2	YLR397C	CSR2	Q12734	1121 aa		6.19	□□□□□ -1.42
AFG2	YLR397C	MSB2	P32334	1306 aa		6.18	□□□□□ -1.42
AFG2	YLR397C	STE18	P18852	110 aa		6.18	□□□□□ -1.42
AFG2	YLR397C	RPA12	P32529	125 aa	Known RBP	6.18	□□□□□ -1.42
AFG2	YLR397C	REC104	P33323	182 aa		6.18	□□□□□ -1.42
AFG2	YLR397C	YBL059W	P34224	193 aa		6.18	□□□□□ -1.42

Retrieved 100 of 5,963 RNA–protein pairs in 34.5 ms