RNA–Protein interactions for RNA: YLR176C

RFX1, Transcript of Major transcriptional repressor of DNA-damage-regulated genes, yeastyeast

Gene RFX1, Length 2,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RFX1YLR176C HRD1Q08109 551 aa0.36□□□□□ -2.35
RFX1YLR176C YDL157CQ12082 118 aa0.36□□□□□ -2.35
RFX1YLR176C PEX11Q12462 236 aa0.36□□□□□ -2.35
RFX1YLR176C TRM3Q07527 1436 aa0.35□□□□□ -2.35
RFX1YLR176C PRE1P22141 198 aaKnown RBP0.35□□□□□ -2.35
RFX1YLR176C PAC10P48363 199 aa0.35□□□□□ -2.35
RFX1YLR176C YGL230CP53074 147 aa0.35□□□□□ -2.35
RFX1YLR176C YDC1Q02896 317 aa0.35□□□□□ -2.35
RFX1YLR176C KEI1Q06346 221 aa0.35□□□□□ -2.35
RFX1YLR176C TRR1P29509 319 aaKnown RBP0.35□□□□□ -2.35
RFX1YLR176C CSH1P38287 376 aa0.35□□□□□ -2.35
RFX1YLR176C YEL028WP39989 153 aa0.35□□□□□ -2.35
RFX1YLR176C POG1P40473 351 aa0.35□□□□□ -2.35
RFX1YLR176C YML079WQ03629 201 aa0.35□□□□□ -2.35
RFX1YLR176C FCY1Q12178 158 aa0.35□□□□□ -2.35
RFX1YLR176C YGR269WP40326 108 aa0.34□□□□□ -2.35
RFX1YLR176C GLR1P41921 483 aaKnown RBP0.34□□□□□ -2.35
RFX1YLR176C JAC1P53193 184 aa0.34□□□□□ -2.35
RFX1YLR176C GIM3P53900 129 aa0.34□□□□□ -2.35
RFX1YLR176C TMA23Q03525 211 aa0.34□□□□□ -2.35
RFX1YLR176C YOL013W-AP0C272 63 aaPredicted RBP0.34□□□□□ -2.36
RFX1YLR176C YCR001WP25347 104 aa0.34□□□□□ -2.36
RFX1YLR176C SEC72P39742 193 aaKnown RBP0.34□□□□□ -2.36
RFX1YLR176C NQM1P53228 333 aaPredicted RBP0.34□□□□□ -2.36
RFX1YLR176C SYM1Q06563 197 aa0.34□□□□□ -2.36
RFX1YLR176C KIN28P06242 306 aa0.33□□□□□ -2.36
RFX1YLR176C NUF2P33895 451 aa0.33□□□□□ -2.36
RFX1YLR176C XPT1P47165 209 aa0.33□□□□□ -2.36
RFX1YLR176C SPS2P08459 502 aa0.33□□□□□ -2.36
RFX1YLR176C RPS25BP0C0T4 108 aaKnown RBP0.33□□□□□ -2.36
RFX1YLR176C YIP3P53633 176 aa0.33□□□□□ -2.36
RFX1YLR176C LIP1Q03579 150 aa0.33□□□□□ -2.36
RFX1YLR176C THI74Q04083 370 aa0.33□□□□□ -2.36
RFX1YLR176C RPS25AQ3E792 108 aaPredicted RBP0.33□□□□□ -2.36
RFX1YLR176C TAF2P23255 1407 aa0.32□□□□□ -2.36
RFX1YLR176C PTC1P35182 281 aa0.32□□□□□ -2.36
RFX1YLR176C SRP14P38985 146 aa0.32□□□□□ -2.36
RFX1YLR176C GEP7P53171 287 aa0.32□□□□□ -2.36
RFX1YLR176C YDL241WQ07738 123 aa0.32□□□□□ -2.36
RFX1YLR176C CIN5P40917 295 aa0.32□□□□□ -2.36
RFX1YLR176C UIP4Q08926 304 aa0.32□□□□□ -2.36
RFX1YLR176C YLR050CQ12155 161 aaKnown RBP0.32□□□□□ -2.36
RFX1YLR176C RAD51P25454 400 aa0.31□□□□□ -2.36
RFX1YLR176C PLP1Q04004 230 aa0.31□□□□□ -2.36
RFX1YLR176C SPT14P32363 452 aa0.3□□□□□ -2.36
RFX1YLR176C APS3P47064 194 aa0.3□□□□□ -2.36
RFX1YLR176C HSK3P69852 69 aa0.3□□□□□ -2.36
RFX1YLR176C VAM10Q08474 114 aa0.3□□□□□ -2.36
RFX1YLR176C CMD1P06787 147 aaKnown RBP0.3□□□□□ -2.36
RFX1YLR176C INO4P13902 151 aa0.3□□□□□ -2.36
RFX1YLR176C ATG10Q07879 167 aa0.3□□□□□ -2.36
RFX1YLR176C CMC4Q3E7A9 73 aa0.3□□□□□ -2.36
RFX1YLR176C RIF1P29539 1916 aa0.3□□□□□ -2.36
RFX1YLR176C YBR027CP38220 110 aa0.29□□□□□ -2.36
RFX1YLR176C HHY1P39982 102 aa0.29□□□□□ -2.36
RFX1YLR176C YEL014CP39999 101 aa0.29□□□□□ -2.36
RFX1YLR176C YPR114WQ06107 315 aa0.29□□□□□ -2.36
RFX1YLR176C YHR213W-BQ8TGK1 99 aa0.29□□□□□ -2.36
RFX1YLR176C HSP150P32478 413 aa0.29□□□□□ -2.36
RFX1YLR176C EGD2P38879 174 aaKnown RBP0.29□□□□□ -2.36
RFX1YLR176C YPT31P38555 223 aaKnown RBP0.28□□□□□ -2.36
RFX1YLR176C GLC8P41818 229 aa0.28□□□□□ -2.36
RFX1YLR176C YNR064CP53750 290 aa0.28□□□□□ -2.36
RFX1YLR176C YNL122CP53921 115 aaPredicted RBP0.28□□□□□ -2.36
RFX1YLR176C SRP102P36057 244 aaPredicted RBP0.28□□□□□ -2.36
RFX1YLR176C YNL140CP53910 189 aa0.28□□□□□ -2.36
RFX1YLR176C SED1Q01589 338 aa0.28□□□□□ -2.36
RFX1YLR176C ADE6P38972 1358 aaKnown RBP0.28□□□□□ -2.36
RFX1YLR176C ROM2P51862 1356 aaKnown RBP0.28□□□□□ -2.36
RFX1YLR176C UBC6P33296 250 aaPredicted RBP0.27□□□□□ -2.37
RFX1YLR176C CCC1P47818 322 aa0.27□□□□□ -2.37
RFX1YLR176C YLR046CQ12253 270 aa0.27□□□□□ -2.37
RFX1YLR176C SPA2P23201 1466 aaKnown RBP0.27□□□□□ -2.37
RFX1YLR176C RPL35AP0CX84 120 aaKnown RBP0.27□□□□□ -2.37
RFX1YLR176C RPL35BP0CX85 120 aaKnown RBP0.27□□□□□ -2.37
RFX1YLR176C TMA20P89886 181 aaPredicted RBP0.27□□□□□ -2.37
RFX1YLR176C YDR102CQ03864 110 aa0.27□□□□□ -2.37
RFX1YLR176C ATG38Q05789 226 aaKnown RBP0.27□□□□□ -2.37
RFX1YLR176C ATP5P09457 212 aa0.26□□□□□ -2.37
RFX1YLR176C YGL101WP53144 215 aa0.26□□□□□ -2.37
RFX1YLR176C MGR2Q02889 113 aa0.26□□□□□ -2.37
RFX1YLR176C PRP8P33334 2413 aaKnown RBP0.26□□□□□ -2.37
RFX1YLR176C ECM31P38122 312 aa0.26□□□□□ -2.37
RFX1YLR176C HTD2P38790 280 aaKnown RBP0.26□□□□□ -2.37
RFX1YLR176C IPT1P38954 527 aa0.25□□□□□ -2.37
RFX1YLR176C ORM1P53224 222 aa0.25□□□□□ -2.37
RFX1YLR176C NMA1Q06178 401 aaKnown RBP0.25□□□□□ -2.37
RFX1YLR176C YOR072WQ08486 104 aa0.25□□□□□ -2.37
RFX1YLR176C HFA1P32874 2273 aa0.25□□□□□ -2.37
RFX1YLR176C HAP2P06774 265 aa0.25□□□□□ -2.37
RFX1YLR176C HYP2P23301 157 aaKnown RBP0.25□□□□□ -2.37
RFX1YLR176C FMN1Q03778 218 aa0.25□□□□□ -2.37
RFX1YLR176C MRS4P23500 304 aa0.24□□□□□ -2.37
RFX1YLR176C ATG8P38182 117 aaRIP-Chip data0.24□□□□□ -2.37not detected
RFX1YLR176C LSM3P57743 89 aaKnown RBP0.24□□□□□ -2.37
RFX1YLR176C PRM3Q08931 133 aa0.24□□□□□ -2.37
RFX1YLR176C HSL1P34244 1518 aa0.24□□□□□ -2.37
RFX1YLR176C RPS22AP0C0W1 130 aaKnown RBP0.24□□□□□ -2.37
RFX1YLR176C UBI4P0CG63 381 aaKnown RBP0.24□□□□□ -2.37
RFX1YLR176C YER121WP40076 114 aa0.24□□□□□ -2.37
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms