RNA–Protein interactions for RNA: YLR175W

CBF5, Transcript of Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs, yeastyeast

Gene CBF5, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF5YLR175W SPO13P23624 291 aa3.65□□□□□ -1.83
CBF5YLR175W CDC50P25656 391 aa3.65□□□□□ -1.83
CBF5YLR175W YBL059WP34224 193 aa3.65□□□□□ -1.83
CBF5YLR175W LSM4P40070 187 aaKnown RBP3.65□□□□□ -1.83
CBF5YLR175W YIL024CP40543 189 aa3.65□□□□□ -1.83
CBF5YLR175W YJR015WP47090 510 aa3.65□□□□□ -1.83
CBF5YLR175W MIC27P50945 234 aa3.65□□□□□ -1.83
CBF5YLR175W SRL1Q08673 210 aa3.65□□□□□ -1.83
CBF5YLR175W ALK2P32789 676 aaPredicted RBP3.64□□□□□ -1.83
CBF5YLR175W PRS4P38063 326 aaPredicted RBP3.64□□□□□ -1.83
CBF5YLR175W YPT31P38555 223 aaKnown RBP3.64□□□□□ -1.83
CBF5YLR175W DOG2P38773 246 aa3.64□□□□□ -1.83
CBF5YLR175W DOG1P38774 246 aa3.64□□□□□ -1.83
CBF5YLR175W FLO5P38894 1075 aa3.64□□□□□ -1.83
CBF5YLR175W BDH1P39714 382 aa3.64□□□□□ -1.83
CBF5YLR175W YGR018CP53211 109 aa3.64□□□□□ -1.83
CBF5YLR175W PAU4P53427 120 aa3.64□□□□□ -1.83
CBF5YLR175W AVO2Q04749 426 aa3.64□□□□□ -1.83
CBF5YLR175W POS5Q06892 414 aa3.64□□□□□ -1.83
CBF5YLR175W NDE2Q07500 545 aa3.64□□□□□ -1.83
CBF5YLR175W CCW14O13547 238 aa3.63□□□□□ -1.83
CBF5YLR175W ELO2P25358 347 aa3.63□□□□□ -1.83
CBF5YLR175W YCR022CP25620 114 aa3.63□□□□□ -1.83
CBF5YLR175W INO2P26798 304 aa3.63□□□□□ -1.83
CBF5YLR175W ELF1P36053 145 aa3.63□□□□□ -1.83
CBF5YLR175W YKL075CP36083 450 aa3.63□□□□□ -1.83
CBF5YLR175W RIB5P38145 238 aa3.63□□□□□ -1.83
CBF5YLR175W AVT5P38176 459 aa3.63□□□□□ -1.83
CBF5YLR175W POG1P40473 351 aa3.63□□□□□ -1.83
CBF5YLR175W MCM22P47167 239 aa3.63□□□□□ -1.83
CBF5YLR175W YGR219WP53307 113 aa3.63□□□□□ -1.83
CBF5YLR175W ATC1Q04005 294 aa3.63□□□□□ -1.83
CBF5YLR175W YHP1Q04116 353 aa3.63□□□□□ -1.83
CBF5YLR175W SHH3Q04487 196 aa3.63□□□□□ -1.83
CBF5YLR175W PAA1Q12447 191 aaKnown RBP3.63□□□□□ -1.83
CBF5YLR175W UTP20P35194 2493 aaKnown RBP3.62□□□□□ -1.83
CBF5YLR175W PAU1P0CE88 120 aa3.62□□□□□ -1.83
CBF5YLR175W PAU14P0CE89 120 aa3.62□□□□□ -1.83
CBF5YLR175W PAU6P0CE90 120 aa3.62□□□□□ -1.83
CBF5YLR175W PAU18P0CE91 120 aa3.62□□□□□ -1.83
CBF5YLR175W PAU8P0CE92 120 aa3.62□□□□□ -1.83
CBF5YLR175W PAU11P0CE93 120 aa3.62□□□□□ -1.83
CBF5YLR175W CNB1P25296 175 aa3.62□□□□□ -1.83
CBF5YLR175W MRPL38P35996 138 aaPredicted RBP3.62□□□□□ -1.83
CBF5YLR175W RRT1P38192 103 aa3.62□□□□□ -1.83
CBF5YLR175W ICS2P38284 255 aa3.62□□□□□ -1.83
CBF5YLR175W DER1P38307 211 aa3.62□□□□□ -1.83
CBF5YLR175W PAU13P38725 120 aa3.62□□□□□ -1.83
CBF5YLR175W TAX4P47030 604 aa3.62□□□□□ -1.83
CBF5YLR175W LST7P53237 242 aa3.62□□□□□ -1.83
CBF5YLR175W ERV25P54837 211 aaKnown RBP3.62□□□□□ -1.83
CBF5YLR175W PAU10Q03050 120 aa3.62□□□□□ -1.83
CBF5YLR175W YMR007WQ03675 126 aa3.62□□□□□ -1.83
CBF5YLR175W SDH7Q04401 133 aa3.62□□□□□ -1.83
CBF5YLR175W SPG4Q04438 115 aa3.62□□□□□ -1.83
CBF5YLR175W CTR3Q06686 241 aa3.62□□□□□ -1.83
CBF5YLR175W PBP4Q07362 185 aaKnown RBP3.62□□□□□ -1.83
CBF5YLR175W PAU20Q08322 120 aa3.62□□□□□ -1.83
CBF5YLR175W PAU9Q3E770 120 aa3.62□□□□□ -1.83
CBF5YLR175W YMR316C-AI2HB70 103 aa3.61□□□□□ -1.83
CBF5YLR175W POP5P28005 173 aa3.61□□□□□ -1.83
CBF5YLR175W RPL14AP36105 138 aaKnown RBP3.61□□□□□ -1.83
CBF5YLR175W RPL14BP38754 138 aaKnown RBP3.61□□□□□ -1.83
CBF5YLR175W YNL194CP40169 301 aa3.61□□□□□ -1.83
CBF5YLR175W PHS1P40857 217 aa3.61□□□□□ -1.83
CBF5YLR175W WWM1P43582 211 aaKnown RBP3.61□□□□□ -1.83
CBF5YLR175W YML122CQ03207 126 aa3.61□□□□□ -1.83
CBF5YLR175W YMR253CQ04835 414 aa3.61□□□□□ -1.83
CBF5YLR175W SME1Q12330 94 aaPredicted RBP3.61□□□□□ -1.83
CBF5YLR175W PCC1Q3E833 88 aa3.61□□□□□ -1.83
CBF5YLR175W CDC7P06243 507 aa3.6□□□□□ -1.83
CBF5YLR175W SEC59P20048 519 aa3.6□□□□□ -1.83
CBF5YLR175W YPS1P32329 569 aa3.6□□□□□ -1.83
CBF5YLR175W MIC12P38341 106 aa3.6□□□□□ -1.83
CBF5YLR175W PET100P38958 111 aa3.6□□□□□ -1.83
CBF5YLR175W LOC1P43586 204 aaPredicted RBP3.6□□□□□ -1.83
CBF5YLR175W HST4P53688 370 aa3.6□□□□□ -1.83
CBF5YLR175W SWT21P53873 357 aaPredicted RBP3.6□□□□□ -1.83
CBF5YLR175W ERV2Q12284 196 aa3.6□□□□□ -1.83
CBF5YLR175W YLR302CO13544 120 aa3.6□□□□□ -1.83
CBF5YLR175W CYC3P06182 269 aa3.6□□□□□ -1.83
CBF5YLR175W RPS22AP0C0W1 130 aaKnown RBP3.6□□□□□ -1.83
CBF5YLR175W MRP2P10663 115 aaPredicted RBP3.6□□□□□ -1.83
CBF5YLR175W SFT2P38166 215 aa3.6□□□□□ -1.83
CBF5YLR175W RTS2P40962 232 aa3.6□□□□□ -1.83
CBF5YLR175W IMP2P46972 177 aa3.6□□□□□ -1.83
CBF5YLR175W ATG27P46989 271 aa3.6□□□□□ -1.83
CBF5YLR175W YJL027CP47063 138 aaPredicted RBP3.6□□□□□ -1.83
CBF5YLR175W VPS55P47111 140 aa3.6□□□□□ -1.83
CBF5YLR175W OCA2P53949 197 aa3.6□□□□□ -1.83
CBF5YLR175W HOR7Q05827 59 aa3.6□□□□□ -1.83
CBF5YLR175W IRC23Q08416 157 aa3.6□□□□□ -1.83
CBF5YLR175W TIM18Q08749 192 aa3.6□□□□□ -1.83
CBF5YLR175W PET494P07390 489 aaPredicted RBP3.59□□□□□ -1.84
CBF5YLR175W DFR1P07807 211 aaKnown RBP RIP-Chip data3.59□□□□□ -1.84not detected
CBF5YLR175W YHR213WP0CI67 198 aa3.59□□□□□ -1.84
CBF5YLR175W HSP12P22943 109 aaKnown RBP3.59□□□□□ -1.84
CBF5YLR175W RNA15P25299 296 aaPredicted RBP3.59□□□□□ -1.84
CBF5YLR175W PRY2P36110 329 aa3.59□□□□□ -1.84
CBF5YLR175W YCR041WP37265 110 aa3.59□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms