RNA–Protein interactions for RNA: YJL140W

RPB4, Transcript of RNA polymerase II subunit B32, yeast

Gene RPB4, Length 666 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPB4	YJL140W	YDR157W	A0A023PZE8	133 aa		4.1	□□□□□ -1.75
RPB4	YJL140W	RPS25B	P0C0T4	108 aa	Known RBP	4.1	□□□□□ -1.75
RPB4	YJL140W	SPS18	P32572	300 aa		4.1	□□□□□ -1.75
RPB4	YJL140W	RPL14A	P36105	138 aa	Known RBP	4.1	□□□□□ -1.75
RPB4	YJL140W	ATP3	P38077	311 aa	Known RBP	4.1	□□□□□ -1.75
RPB4	YJL140W	RPL14B	P38754	138 aa	Known RBP	4.1	□□□□□ -1.75
RPB4	YJL140W	PSD1	P39006	500 aa		4.1	□□□□□ -1.75
RPB4	YJL140W	POG1	P40473	351 aa		4.1	□□□□□ -1.75
RPB4	YJL140W	RPL9B	P51401	191 aa	Known RBP	4.1	□□□□□ -1.75
RPB4	YJL140W	YMR007W	Q03675	126 aa		4.1	□□□□□ -1.75
RPB4	YJL140W	YHP1	Q04116	353 aa		4.1	□□□□□ -1.75
RPB4	YJL140W	FRQ1	Q06389	190 aa		4.1	□□□□□ -1.75
RPB4	YJL140W	CTR3	Q06686	241 aa		4.1	□□□□□ -1.75
RPB4	YJL140W	RPS25A	Q3E792	108 aa	Predicted RBP	4.1	□□□□□ -1.75
RPB4	YJL140W	VPS63	O13549	108 aa		4.09	□□□□□ -1.75
RPB4	YJL140W	MRS3	P10566	314 aa		4.09	□□□□□ -1.75
RPB4	YJL140W	YBL059W	P34224	193 aa		4.09	□□□□□ -1.75
RPB4	YJL140W	SOR1	P35497	357 aa	Known RBP	4.09	□□□□□ -1.75
RPB4	YJL140W	QDR3	P38227	689 aa		4.09	□□□□□ -1.75
RPB4	YJL140W	NSE4	P43124	402 aa		4.09	□□□□□ -1.75
RPB4	YJL140W	YJL118W	P47022	219 aa		4.09	□□□□□ -1.75
RPB4	YJL140W	AVO2	Q04749	426 aa		4.09	□□□□□ -1.75
RPB4	YJL140W	YLR179C	Q06252	201 aa	Known RBP	4.09	□□□□□ -1.75
RPB4	YJL140W	SOR2	Q07786	357 aa		4.09	□□□□□ -1.75
RPB4	YJL140W	SME1	Q12330	94 aa	Predicted RBP	4.09	□□□□□ -1.75
RPB4	YJL140W	ILV5	P06168	395 aa	Known RBP	4.08	□□□□□ -1.76
RPB4	YJL140W	NTF2	P33331	125 aa	Known RBP	4.08	□□□□□ -1.76
RPB4	YJL140W	PMU1	P36069	295 aa		4.08	□□□□□ -1.76
RPB4	YJL140W	SHB17	P36136	271 aa	Known RBP	4.08	□□□□□ -1.76
RPB4	YJL140W	YCR041W	P37265	110 aa		4.08	□□□□□ -1.76
RPB4	YJL140W	ADH5	P38113	351 aa	Known RBP	4.08	□□□□□ -1.76
RPB4	YJL140W	ATG8	P38182	117 aa	RIP-Chip data	4.08	□□□□□ -1.76	not detected
RPB4	YJL140W	NSA2	P40078	261 aa	Known RBP	4.08	□□□□□ -1.76
RPB4	YJL140W	AGE2	P40529	298 aa		4.08	□□□□□ -1.76
RPB4	YJL140W	RTS2	P40962	232 aa		4.08	□□□□□ -1.76
RPB4	YJL140W	VMA21	P41806	77 aa		4.08	□□□□□ -1.76
RPB4	YJL140W	HXT14	P42833	540 aa		4.08	□□□□□ -1.76
RPB4	YJL140W	YJR015W	P47090	510 aa		4.08	□□□□□ -1.76
RPB4	YJL140W	PAU4	P53427	120 aa		4.08	□□□□□ -1.76
RPB4	YJL140W	HHO1	P53551	258 aa		4.08	□□□□□ -1.76
RPB4	YJL140W	YNL234W	P53857	426 aa		4.08	□□□□□ -1.76
RPB4	YJL140W	YGL258W-A	Q3E740	77 aa		4.08	□□□□□ -1.76
RPB4	YJL140W	YMR316C-A	I2HB70	103 aa		4.07	□□□□□ -1.76
RPB4	YJL140W	HTB1	P02293	131 aa	Known RBP	4.07	□□□□□ -1.76
RPB4	YJL140W	PAU1	P0CE88	120 aa		4.07	□□□□□ -1.76
RPB4	YJL140W	PAU14	P0CE89	120 aa		4.07	□□□□□ -1.76
RPB4	YJL140W	PAU6	P0CE90	120 aa		4.07	□□□□□ -1.76
RPB4	YJL140W	PAU18	P0CE91	120 aa		4.07	□□□□□ -1.76
RPB4	YJL140W	PAU8	P0CE92	120 aa		4.07	□□□□□ -1.76
RPB4	YJL140W	PAU11	P0CE93	120 aa		4.07	□□□□□ -1.76
RPB4	YJL140W	RPL42A	P0CX27	106 aa	Known RBP	4.07	□□□□□ -1.76
RPB4	YJL140W	RPL42B	P0CX28	106 aa	Known RBP	4.07	□□□□□ -1.76
RPB4	YJL140W	NOP1	P15646	327 aa	Known RBP	4.07	□□□□□ -1.76
RPB4	YJL140W	QCR9	P22289	66 aa		4.07	□□□□□ -1.76
RPB4	YJL140W	SUA7	P29055	345 aa	Predicted RBP	4.07	□□□□□ -1.76
RPB4	YJL140W	RPS0A	P32905	252 aa	Known RBP	4.07	□□□□□ -1.76
RPB4	YJL140W	DER1	P38307	211 aa		4.07	□□□□□ -1.76
RPB4	YJL140W	PAU13	P38725	120 aa		4.07	□□□□□ -1.76
RPB4	YJL140W	PGD1	P40356	397 aa		4.07	□□□□□ -1.76
RPB4	YJL140W	SMD3	P43321	101 aa	Known RBP	4.07	□□□□□ -1.76
RPB4	YJL140W	BNA1	P47096	177 aa		4.07	□□□□□ -1.76
RPB4	YJL140W	BNS1	P50084	137 aa		4.07	□□□□□ -1.76
RPB4	YJL140W	YGR026W	P53217	278 aa		4.07	□□□□□ -1.76
RPB4	YJL140W	PAU10	Q03050	120 aa		4.07	□□□□□ -1.76
RPB4	YJL140W	NDE2	Q07500	545 aa		4.07	□□□□□ -1.76
RPB4	YJL140W	PAU20	Q08322	120 aa		4.07	□□□□□ -1.76
RPB4	YJL140W	YPS3	Q12303	508 aa		4.07	□□□□□ -1.76
RPB4	YJL140W	ATO3	Q12359	275 aa		4.07	□□□□□ -1.76
RPB4	YJL140W	PAU9	Q3E770	120 aa		4.07	□□□□□ -1.76
RPB4	YJL140W	MDN1	Q12019	4910 aa	Known RBP	4.06	□□□□□ -1.76
RPB4	YJL140W	RPB3	P16370	318 aa	Known RBP	4.06	□□□□□ -1.76
RPB4	YJL140W	RTC3	P38804	111 aa	Predicted RBP	4.06	□□□□□ -1.76
RPB4	YJL140W	LOC1	P43586	204 aa	Predicted RBP	4.06	□□□□□ -1.76
RPB4	YJL140W	MOG1	P47123	218 aa		4.06	□□□□□ -1.76
RPB4	YJL140W	DAN1	P47178	298 aa		4.06	□□□□□ -1.76
RPB4	YJL140W	RIB4	P50861	169 aa	Predicted RBP	4.06	□□□□□ -1.76
RPB4	YJL140W	YGL114W	P53134	725 aa		4.06	□□□□□ -1.76
RPB4	YJL140W	TIM21	P53220	239 aa		4.06	□□□□□ -1.76
RPB4	YJL140W	MIX17	Q03667	156 aa		4.06	□□□□□ -1.76
RPB4	YJL140W	ARR2	Q06597	130 aa		4.06	□□□□□ -1.76
RPB4	YJL140W	YLR112W	Q12130	139 aa		4.06	□□□□□ -1.76
RPB4	YJL140W	FCY1	Q12178	158 aa		4.06	□□□□□ -1.76
RPB4	YJL140W	ERV2	Q12284	196 aa		4.06	□□□□□ -1.76
RPB4	YJL140W	SOD1	P00445	154 aa	Known RBP	4.05	□□□□□ -1.76
RPB4	YJL140W	RPS8A	P0CX39	200 aa	Known RBP	4.05	□□□□□ -1.76
RPB4	YJL140W	RPS8B	P0CX40	200 aa	Known RBP	4.05	□□□□□ -1.76
RPB4	YJL140W	POP5	P28005	173 aa		4.05	□□□□□ -1.76
RPB4	YJL140W	YKR045C	P36138	183 aa		4.05	□□□□□ -1.76
RPB4	YJL140W	MRPL4	P36517	319 aa		4.05	□□□□□ -1.76
RPB4	YJL140W	SDH4	P37298	181 aa		4.05	□□□□□ -1.76
RPB4	YJL140W	PHS1	P40857	217 aa		4.05	□□□□□ -1.76
RPB4	YJL140W	YJL213W	P40896	331 aa		4.05	□□□□□ -1.76
RPB4	YJL140W	LST8	P41318	303 aa		4.05	□□□□□ -1.76
RPB4	YJL140W	HIT1	P46973	164 aa		4.05	□□□□□ -1.76
RPB4	YJL140W	DSK2	P48510	373 aa		4.05	□□□□□ -1.76
RPB4	YJL140W	BOR1	P53838	576 aa		4.05	□□□□□ -1.76
RPB4	YJL140W	IZH1	Q03419	316 aa		4.05	□□□□□ -1.76
RPB4	YJL140W	YMR166C	Q03829	368 aa		4.05	□□□□□ -1.76
RPB4	YJL140W	SHH3	Q04487	196 aa		4.05	□□□□□ -1.76
RPB4	YJL140W	MCH1	Q07376	486 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 69 ms