RNA–Protein interactions for RNA: YJL024C

APS3, Transcript of Small subunit of the clathrin-associated adaptor complex AP-3, yeast

Gene APS3, Length 585 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APS3	YJL024C	RKI1	Q12189	258 aa		4.57	□□□□□ -1.68
APS3	YJL024C	ERV2	Q12284	196 aa		4.57	□□□□□ -1.68
APS3	YJL024C	YPR145C-A	Q2V2P0	78 aa		4.57	□□□□□ -1.68
APS3	YJL024C	PAU9	Q3E770	120 aa		4.57	□□□□□ -1.68
APS3	YJL024C	YER145C-A	A0A023PYF4	145 aa		4.56	□□□□□ -1.68
APS3	YJL024C	ILV5	P06168	395 aa	Known RBP	4.56	□□□□□ -1.68
APS3	YJL024C	PHO85	P17157	305 aa		4.56	□□□□□ -1.68
APS3	YJL024C	ALK2	P32789	676 aa	Predicted RBP	4.56	□□□□□ -1.68
APS3	YJL024C	RPS0A	P32905	252 aa	Known RBP	4.56	□□□□□ -1.68
APS3	YJL024C	CSH1	P38287	376 aa		4.56	□□□□□ -1.68
APS3	YJL024C	PHS1	P40857	217 aa		4.56	□□□□□ -1.68
APS3	YJL024C	YFL054C	P43549	646 aa		4.56	□□□□□ -1.68
APS3	YJL024C	DSK2	P48510	373 aa		4.56	□□□□□ -1.68
APS3	YJL024C	BNS1	P50084	137 aa		4.56	□□□□□ -1.68
APS3	YJL024C	LST7	P53237	242 aa		4.56	□□□□□ -1.68
APS3	YJL024C	HHO1	P53551	258 aa		4.56	□□□□□ -1.68
APS3	YJL024C	PBP4	Q07362	185 aa	Known RBP	4.56	□□□□□ -1.68
APS3	YJL024C	IRC23	Q08416	157 aa		4.56	□□□□□ -1.68
APS3	YJL024C	RPL15A	P05748	204 aa	Known RBP	4.55	□□□□□ -1.68
APS3	YJL024C	CDC7	P06243	507 aa		4.55	□□□□□ -1.68
APS3	YJL024C	YCL042W	P25572	119 aa		4.55	□□□□□ -1.68
APS3	YJL024C	RPB9	P27999	122 aa		4.55	□□□□□ -1.68
APS3	YJL024C	SUA7	P29055	345 aa	Predicted RBP	4.55	□□□□□ -1.68
APS3	YJL024C	YPS1	P32329	569 aa		4.55	□□□□□ -1.68
APS3	YJL024C	CDS1	P38221	457 aa		4.55	□□□□□ -1.68
APS3	YJL024C	PTC7	P38797	343 aa		4.55	□□□□□ -1.68
APS3	YJL024C	PET100	P38958	111 aa		4.55	□□□□□ -1.68
APS3	YJL024C	LSM4	P40070	187 aa	Known RBP	4.55	□□□□□ -1.68
APS3	YJL024C	RTS2	P40962	232 aa		4.55	□□□□□ -1.68
APS3	YJL024C	SAS2	P40963	338 aa		4.55	□□□□□ -1.68
APS3	YJL024C	ATG27	P46989	271 aa		4.55	□□□□□ -1.68
APS3	YJL024C	RPL15B	P54780	204 aa	Predicted RBP	4.55	□□□□□ -1.68
APS3	YJL024C	RXT3	Q07458	294 aa		4.55	□□□□□ -1.68
APS3	YJL024C	SEC59	P20048	519 aa		4.54	□□□□□ -1.68
APS3	YJL024C	NTF2	P33331	125 aa	Known RBP	4.54	□□□□□ -1.68
APS3	YJL024C	MRPL38	P35996	138 aa	Predicted RBP	4.54	□□□□□ -1.68
APS3	YJL024C	ATG8	P38182	117 aa	RIP-Chip data	4.54	□□□□□ -1.68	not detected
APS3	YJL024C	TRS20	P38334	175 aa		4.54	□□□□□ -1.68
APS3	YJL024C	YML122C	Q03207	126 aa		4.54	□□□□□ -1.68
APS3	YJL024C	ATC1	Q04005	294 aa		4.54	□□□□□ -1.68
APS3	YJL024C	RPS2	P25443	254 aa	Known RBP	4.53	□□□□□ -1.68
APS3	YJL024C	LAC1	P28496	418 aa		4.53	□□□□□ -1.68
APS3	YJL024C	ACP1	P32463	125 aa		4.53	□□□□□ -1.68
APS3	YJL024C	AFR1	P33304	620 aa		4.53	□□□□□ -1.68
APS3	YJL024C	MIA40	P36046	403 aa		4.53	□□□□□ -1.68
APS3	YJL024C	AVT5	P38176	459 aa		4.53	□□□□□ -1.68
APS3	YJL024C	RRT1	P38192	103 aa		4.53	□□□□□ -1.68
APS3	YJL024C	IMD2	P38697	523 aa	Known RBP	4.53	□□□□□ -1.68
APS3	YJL024C	DOG2	P38773	246 aa		4.53	□□□□□ -1.68
APS3	YJL024C	DOG1	P38774	246 aa		4.53	□□□□□ -1.68
APS3	YJL024C	YJL027C	P47063	138 aa	Predicted RBP	4.53	□□□□□ -1.68
APS3	YJL024C	TIM21	P53220	239 aa		4.53	□□□□□ -1.68
APS3	YJL024C	HST4	P53688	370 aa		4.53	□□□□□ -1.68
APS3	YJL024C	OCA2	P53949	197 aa		4.53	□□□□□ -1.68
APS3	YJL024C	YPL108W	Q02872	168 aa	Predicted RBP	4.53	□□□□□ -1.68
APS3	YJL024C	LOA1	Q06508	300 aa		4.53	□□□□□ -1.68
APS3	YJL024C	RPP2A	P05319	106 aa	Known RBP	4.52	□□□□□ -1.69
APS3	YJL024C	ADH3	P07246	375 aa	Known RBP	4.52	□□□□□ -1.69
APS3	YJL024C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.52	□□□□□ -1.69	not detected
APS3	YJL024C	RNA15	P25299	296 aa	Predicted RBP	4.52	□□□□□ -1.69
APS3	YJL024C	INO2	P26798	304 aa		4.52	□□□□□ -1.69
APS3	YJL024C	POP5	P28005	173 aa		4.52	□□□□□ -1.69
APS3	YJL024C	MRPL4	P36517	319 aa		4.52	□□□□□ -1.69
APS3	YJL024C	MRPS9	P38120	278 aa		4.52	□□□□□ -1.69
APS3	YJL024C	SFT2	P38166	215 aa		4.52	□□□□□ -1.69
APS3	YJL024C	LSM2	P38203	95 aa	Known RBP	4.52	□□□□□ -1.69
APS3	YJL024C	GLE2	P40066	365 aa		4.52	□□□□□ -1.69
APS3	YJL024C	PGD1	P40356	397 aa		4.52	□□□□□ -1.69
APS3	YJL024C	VMA21	P41806	77 aa		4.52	□□□□□ -1.69
APS3	YJL024C	IMP2	P46972	177 aa		4.52	□□□□□ -1.69
APS3	YJL024C	YGR219W	P53307	113 aa		4.52	□□□□□ -1.69
APS3	YJL024C	LRS4	Q04087	347 aa	Known RBP	4.52	□□□□□ -1.69
APS3	YJL024C	LDS2	Q08218	356 aa		4.52	□□□□□ -1.69
APS3	YJL024C	SRL1	Q08673	210 aa		4.52	□□□□□ -1.69
APS3	YJL024C	AYT1	Q12226	474 aa		4.52	□□□□□ -1.69
APS3	YJL024C	YLR118C	Q12354	227 aa		4.52	□□□□□ -1.69
APS3	YJL024C	PET494	P07390	489 aa	Predicted RBP	4.51	□□□□□ -1.69
APS3	YJL024C	RPS22A	P0C0W1	130 aa	Known RBP	4.51	□□□□□ -1.69
APS3	YJL024C	YHR213W	P0CI67	198 aa		4.51	□□□□□ -1.69
APS3	YJL024C	FEN2	P25621	512 aa	Known RBP	4.51	□□□□□ -1.69
APS3	YJL024C	COQ3	P27680	312 aa		4.51	□□□□□ -1.69
APS3	YJL024C	SDH4	P37298	181 aa		4.51	□□□□□ -1.69
APS3	YJL024C	PRS4	P38063	326 aa	Predicted RBP	4.51	□□□□□ -1.69
APS3	YJL024C	ICS2	P38284	255 aa		4.51	□□□□□ -1.69
APS3	YJL024C	YER188W	P40103	239 aa		4.51	□□□□□ -1.69
APS3	YJL024C	HIT1	P46973	164 aa		4.51	□□□□□ -1.69
APS3	YJL024C	DAN1	P47178	298 aa		4.51	□□□□□ -1.69
APS3	YJL024C	YNR071C	P53757	342 aa		4.51	□□□□□ -1.69
APS3	YJL024C	SWT21	P53873	357 aa	Predicted RBP	4.51	□□□□□ -1.69
APS3	YJL024C	SDH7	Q04401	133 aa		4.51	□□□□□ -1.69
APS3	YJL024C	FIT2	Q08906	153 aa		4.51	□□□□□ -1.69
APS3	YJL024C	HMX1	P32339	317 aa		4.5	□□□□□ -1.69
APS3	YJL024C	YCR041W	P37265	110 aa		4.5	□□□□□ -1.69
APS3	YJL024C	YIL163C	P40448	117 aa		4.5	□□□□□ -1.69
APS3	YJL024C	NSE4	P43124	402 aa		4.5	□□□□□ -1.69
APS3	YJL024C	STP4	Q07351	490 aa		4.5	□□□□□ -1.69
APS3	YJL024C	TIM18	Q08749	192 aa		4.5	□□□□□ -1.69
APS3	YJL024C	CCW14	O13547	238 aa		4.49	□□□□□ -1.69
APS3	YJL024C	CYC3	P06182	269 aa		4.49	□□□□□ -1.69
APS3	YJL024C	RPB3	P16370	318 aa	Known RBP	4.49	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 73.6 ms