RNA–Protein interactions for RNA: YHR060W

VMA22, Transcript of Protein that is required for vacuolar H+-ATPase (V-ATPase) function, yeast

Gene VMA22, Length 546 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA22	YHR060W	ERG25	P53045	309 aa		3	□□□□□ -1.93
VMA22	YHR060W	DAD3	P69850	94 aa		3	□□□□□ -1.93
VMA22	YHR060W	APS2	Q00381	147 aa		3	□□□□□ -1.93
VMA22	YHR060W	YDR102C	Q03864	110 aa		3	□□□□□ -1.93
VMA22	YHR060W	IRC23	Q08416	157 aa		3	□□□□□ -1.93
VMA22	YHR060W	YOR015W	Q12169	119 aa		3	□□□□□ -1.93
VMA22	YHR060W	YNL277W-A	Q3E7Z0	62 aa		3	□□□□□ -1.93
VMA22	YHR060W	FMP49	A0A023PZB3	126 aa		2.99	□□□□□ -1.93
VMA22	YHR060W	YLR236C	A0A023PZG4	107 aa		2.99	□□□□□ -1.93
VMA22	YHR060W	AHT1	P29589	182 aa		2.99	□□□□□ -1.93
VMA22	YHR060W	RPS1A	P33442	255 aa	Known RBP	2.99	□□□□□ -1.93
VMA22	YHR060W	PHO88	P38264	188 aa	Predicted RBP	2.99	□□□□□ -1.93
VMA22	YHR060W	BOL2	P53082	120 aa		2.99	□□□□□ -1.93
VMA22	YHR060W	YNR064C	P53750	290 aa		2.99	□□□□□ -1.93
VMA22	YHR060W	YNR077C	P53758	84 aa		2.99	□□□□□ -1.93
VMA22	YHR060W	NOP1	P15646	327 aa	Known RBP	2.98	□□□□□ -1.93
VMA22	YHR060W	SPT14	P32363	452 aa		2.98	□□□□□ -1.93
VMA22	YHR060W	TFC1	P32367	649 aa		2.98	□□□□□ -1.93
VMA22	YHR060W	CLB6	P32943	380 aa		2.98	□□□□□ -1.93
VMA22	YHR060W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	2.98	□□□□□ -1.93	not detected
VMA22	YHR060W	YJL218W	P40892	196 aa	Known RBP	2.98	□□□□□ -1.93
VMA22	YHR060W	SAY1	P53324	424 aa		2.98	□□□□□ -1.93
VMA22	YHR060W	EST3	Q03096	181 aa		2.98	□□□□□ -1.93
VMA22	YHR060W	ATG10	Q07879	167 aa		2.98	□□□□□ -1.93
VMA22	YHR060W	EMC6	Q12431	108 aa		2.98	□□□□□ -1.93
VMA22	YHR060W	YIR021W-A	Q3E739	70 aa		2.98	□□□□□ -1.93
VMA22	YHR060W	BOL1	Q3E793	110 aa		2.98	□□□□□ -1.93
VMA22	YHR060W	MET5	P47169	1442 aa		2.98	□□□□□ -1.93
VMA22	YHR060W	PAC10	P48363	199 aa		2.97	□□□□□ -1.93
VMA22	YHR060W	SPG1	P50088	95 aa		2.97	□□□□□ -1.93
VMA22	YHR060W	ATP19	P81451	68 aa		2.97	□□□□□ -1.93
VMA22	YHR060W	ARL3	Q02804	198 aa		2.97	□□□□□ -1.93
VMA22	YHR060W	PIR1	Q03178	341 aa		2.97	□□□□□ -1.93
VMA22	YHR060W	RDS3	Q06835	107 aa	Predicted RBP	2.97	□□□□□ -1.93
VMA22	YHR060W	UIP4	Q08926	304 aa		2.97	□□□□□ -1.93
VMA22	YHR060W	MDS3	P53094	1487 aa		2.96	□□□□□ -1.93
VMA22	YHR060W	YJR146W	P47174	117 aa		2.96	□□□□□ -1.94
VMA22	YHR060W	AIM11	P87275	137 aa		2.96	□□□□□ -1.94
VMA22	YHR060W	YPR114W	Q06107	315 aa		2.96	□□□□□ -1.94
VMA22	YHR060W	YOR381W-A	Q3E804	55 aa		2.96	□□□□□ -1.94
VMA22	YHR060W	YOR304C-A	O14468	76 aa		2.95	□□□□□ -1.94
VMA22	YHR060W	YHR140W	P38842	239 aa		2.95	□□□□□ -1.94
VMA22	YHR060W	EMC4	P53073	190 aa		2.95	□□□□□ -1.94
VMA22	YHR060W	YML079W	Q03629	201 aa		2.95	□□□□□ -1.94
VMA22	YHR060W	DML1	Q03652	475 aa		2.95	□□□□□ -1.94
VMA22	YHR060W	VPS68	Q12016	184 aa		2.95	□□□□□ -1.94
VMA22	YHR060W	RAD28	Q12021	506 aa		2.95	□□□□□ -1.94
VMA22	YHR060W	YPR013C	Q12145	317 aa		2.95	□□□□□ -1.94
VMA22	YHR060W	RPS1B	P23248	255 aa	Known RBP	2.94	□□□□□ -1.94
VMA22	YHR060W	HYM1	P32464	399 aa		2.94	□□□□□ -1.94
VMA22	YHR060W	GSP2	P32836	220 aa	Known RBP	2.94	□□□□□ -1.94
VMA22	YHR060W	YOR062C	P36025	268 aa		2.94	□□□□□ -1.94
VMA22	YHR060W	YPT31	P38555	223 aa	Known RBP	2.94	□□□□□ -1.94
VMA22	YHR060W	MOB1	P40484	314 aa		2.94	□□□□□ -1.94
VMA22	YHR060W	GEP7	P53171	287 aa		2.94	□□□□□ -1.94
VMA22	YHR060W	BUD25	P85052	153 aa		2.94	□□□□□ -1.94
VMA22	YHR060W	UPS3	Q04006	179 aa		2.94	□□□□□ -1.94
VMA22	YHR060W	ANT1	Q06497	328 aa		2.94	□□□□□ -1.94
VMA22	YHR060W	YPR174C	Q06616	221 aa	Predicted RBP	2.94	□□□□□ -1.94
VMA22	YHR060W	SEC11	P15367	167 aa		2.93	□□□□□ -1.94
VMA22	YHR060W	DDR48	P18899	430 aa	Known RBP	2.93	□□□□□ -1.94
VMA22	YHR060W	SPO73	P40031	143 aa		2.93	□□□□□ -1.94
VMA22	YHR060W	YJL144W	P47009	104 aa		2.93	□□□□□ -1.94
VMA22	YHR060W	ELC1	Q03071	99 aa		2.93	□□□□□ -1.94
VMA22	YHR060W	RIM9	Q04734	239 aa		2.93	□□□□□ -1.94
VMA22	YHR060W	SPA2	P23201	1466 aa	Known RBP	2.92	□□□□□ -1.94
VMA22	YHR060W	MDH2	P22133	377 aa		2.92	□□□□□ -1.94
VMA22	YHR060W	YHR022C	P38763	256 aa		2.92	□□□□□ -1.94
VMA22	YHR060W	GAA1	P39012	614 aa		2.92	□□□□□ -1.94
VMA22	YHR060W	YLR099W-A	Q3E798	87 aa		2.92	□□□□□ -1.94
VMA22	YHR060W	YOL162W	P0CF19	215 aa		2.91	□□□□□ -1.94
VMA22	YHR060W	RPL14A	P36105	138 aa	Known RBP	2.91	□□□□□ -1.94
VMA22	YHR060W	SDH4	P37298	181 aa		2.91	□□□□□ -1.94
VMA22	YHR060W	RPL14B	P38754	138 aa	Known RBP	2.91	□□□□□ -1.94
VMA22	YHR060W	HPM1	P40481	377 aa		2.91	□□□□□ -1.94
VMA22	YHR060W	SFT1	P43682	97 aa		2.91	□□□□□ -1.94
VMA22	YHR060W	YJL027C	P47063	138 aa	Predicted RBP	2.91	□□□□□ -1.94
VMA22	YHR060W	LSM8	P47093	109 aa	Known RBP	2.91	□□□□□ -1.94
VMA22	YHR060W	KNH1	P50112	268 aa		2.91	□□□□□ -1.94
VMA22	YHR060W	MPC1	P53157	130 aa	Known RBP	2.91	□□□□□ -1.94
VMA22	YHR060W	THG1	P53215	237 aa	Known RBP	2.91	□□□□□ -1.94
VMA22	YHR060W	DAD4	P69851	72 aa		2.91	□□□□□ -1.94
VMA22	YHR060W	FCF2	Q12035	217 aa	Predicted RBP	2.91	□□□□□ -1.94
VMA22	YHR060W	ATG41	Q12048	136 aa		2.91	□□□□□ -1.94
VMA22	YHR060W	YLR118C	Q12354	227 aa		2.91	□□□□□ -1.94
VMA22	YHR060W	SCS22	Q6Q595	175 aa		2.91	□□□□□ -1.94
VMA22	YHR060W	KIN28	P06242	306 aa		2.9	□□□□□ -1.95
VMA22	YHR060W	SPS2	P08459	502 aa		2.9	□□□□□ -1.95
VMA22	YHR060W	MAK31	P23059	88 aa		2.9	□□□□□ -1.95
VMA22	YHR060W	POP3	P53833	195 aa	Predicted RBP	2.9	□□□□□ -1.95
VMA22	YHR060W	CYT2	Q00873	224 aa		2.9	□□□□□ -1.95
VMA22	YHR060W	YHP1	Q04116	353 aa		2.9	□□□□□ -1.95
VMA22	YHR060W	PRM7	Q12459	698 aa		2.9	□□□□□ -1.95
VMA22	YHR060W	FKS1	P38631	1876 aa	Known RBP	2.9	□□□□□ -1.95
VMA22	YHR060W	UGX2	P32772	223 aa		2.89	□□□□□ -1.95
VMA22	YHR060W	DSE2	P38844	325 aa		2.89	□□□□□ -1.95
VMA22	YHR060W	NSE4	P43124	402 aa		2.89	□□□□□ -1.95
VMA22	YHR060W	RUB1	Q03919	77 aa		2.89	□□□□□ -1.95
VMA22	YHR060W	RNH202	Q05635	350 aa		2.89	□□□□□ -1.95
VMA22	YHR060W	KTI11	Q3E840	82 aa		2.89	□□□□□ -1.95

Retrieved 100 of 5,963 RNA–protein pairs in 24.2 ms