RNA–Protein interactions for RNA: YGR181W

TIM13, Transcript of Mitochondrial intermembrane space protein, yeast

Gene TIM13, Length 318 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIM13	YGR181W	TAO3	P40468	2376 aa		0.12	□□□□□ -2.39
TIM13	YGR181W	TEL1	P38110	2787 aa		0.11	□□□□□ -2.39
TIM13	YGR181W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	0.11	□□□□□ -2.39	not detected
TIM13	YGR181W	RFC2	P40348	353 aa		0.11	□□□□□ -2.39
TIM13	YGR181W	PAC10	P48363	199 aa		0.11	□□□□□ -2.39
TIM13	YGR181W	SOL1	P50278	321 aa		0.11	□□□□□ -2.39
TIM13	YGR181W	GPI17	Q04080	534 aa		0.11	□□□□□ -2.39
TIM13	YGR181W	YDL157C	Q12082	118 aa		0.11	□□□□□ -2.39
TIM13	YGR181W	YOR214C	Q12282	236 aa		0.11	□□□□□ -2.39
TIM13	YGR181W	UTP20	P35194	2493 aa	Known RBP	0.11	□□□□□ -2.39
TIM13	YGR181W	RAD9	P14737	1309 aa		0.11	□□□□□ -2.39
TIM13	YGR181W	KIN28	P06242	306 aa		0.1	□□□□□ -2.39
TIM13	YGR181W	CAF4	P36130	643 aa		0.1	□□□□□ -2.39
TIM13	YGR181W	YKR041W	P36134	250 aa		0.1	□□□□□ -2.39
TIM13	YGR181W	YGR269W	P40326	108 aa		0.1	□□□□□ -2.39
TIM13	YGR181W	MOB1	P40484	314 aa		0.1	□□□□□ -2.39
TIM13	YGR181W	YPR127W	Q06494	345 aa		0.1	□□□□□ -2.39
TIM13	YGR181W	BNI1	P41832	1953 aa		0.09	□□□□□ -2.39
TIM13	YGR181W	YEL073C	P39974	107 aa		0.09	□□□□□ -2.4
TIM13	YGR181W	CIN5	P40917	295 aa		0.09	□□□□□ -2.4
TIM13	YGR181W	TTI2	P47168	421 aa		0.09	□□□□□ -2.4
TIM13	YGR181W	YML079W	Q03629	201 aa		0.09	□□□□□ -2.4
TIM13	YGR181W	ROM2	P51862	1356 aa	Known RBP	0.08	□□□□□ -2.4
TIM13	YGR181W	CSF1	Q12150	2958 aa		0.08	□□□□□ -2.4
TIM13	YGR181W	RAD6	P06104	172 aa		0.08	□□□□□ -2.4
TIM13	YGR181W	RPS25B	P0C0T4	108 aa	Known RBP	0.08	□□□□□ -2.4
TIM13	YGR181W	APA2	P22108	325 aa		0.08	□□□□□ -2.4
TIM13	YGR181W	YBR027C	P38220	110 aa		0.08	□□□□□ -2.4
TIM13	YGR181W	CGR1	P53188	120 aa		0.08	□□□□□ -2.4
TIM13	YGR181W	RPS25A	Q3E792	108 aa	Predicted RBP	0.08	□□□□□ -2.4
TIM13	YGR181W	TAF2	P23255	1407 aa		0.07	□□□□□ -2.4
TIM13	YGR181W	UBR1	P19812	1950 aa		0.07	□□□□□ -2.4
TIM13	YGR181W	SPS2	P08459	502 aa		0.07	□□□□□ -2.4
TIM13	YGR181W	SHG1	P38337	142 aa		0.07	□□□□□ -2.4
TIM13	YGR181W	NVJ1	P38881	321 aa		0.07	□□□□□ -2.4
TIM13	YGR181W	CCC1	P47818	322 aa		0.07	□□□□□ -2.4
TIM13	YGR181W	TIM13	P53299	105 aa		0.07	□□□□□ -2.4
TIM13	YGR181W	YNL122C	P53921	115 aa	Predicted RBP	0.07	□□□□□ -2.4
TIM13	YGR181W	SNO1	Q03144	224 aa		0.07	□□□□□ -2.4
TIM13	YGR181W	CSH1	P38287	376 aa		0.06	□□□□□ -2.4
TIM13	YGR181W	YEL028W	P39989	153 aa		0.06	□□□□□ -2.4
TIM13	YGR181W	GLC8	P41818	229 aa		0.06	□□□□□ -2.4
TIM13	YGR181W	APS3	P47064	194 aa		0.06	□□□□□ -2.4
TIM13	YGR181W	NQM1	P53228	333 aa	Predicted RBP	0.06	□□□□□ -2.4
TIM13	YGR181W	HPT1	Q04178	221 aa	Known RBP	0.06	□□□□□ -2.4
TIM13	YGR181W	YDL241W	Q07738	123 aa		0.06	□□□□□ -2.4
TIM13	YGR181W	HRD1	Q08109	551 aa		0.06	□□□□□ -2.4
TIM13	YGR181W	IRA2	P19158	3079 aa		0.05	□□□□□ -2.4
TIM13	YGR181W	SPT14	P32363	452 aa		0.05	□□□□□ -2.4
TIM13	YGR181W	GEP7	P53171	287 aa		0.05	□□□□□ -2.4
TIM13	YGR181W	HOP2	P53187	214 aa		0.05	□□□□□ -2.4
TIM13	YGR181W	MGR2	Q02889	113 aa		0.05	□□□□□ -2.4
TIM13	YGR181W	SYM1	Q06563	197 aa		0.05	□□□□□ -2.4
TIM13	YGR181W	VAM10	Q08474	114 aa		0.05	□□□□□ -2.4
TIM13	YGR181W	CMC4	Q3E7A9	73 aa		0.05	□□□□□ -2.4
TIM13	YGR181W	YLR307C-A	Q3E825	87 aa		0.05	□□□□□ -2.4
TIM13	YGR181W	TRM3	Q07527	1436 aa		0.04	□□□□□ -2.4
TIM13	YGR181W	INO4	P13902	151 aa		0.04	□□□□□ -2.4
TIM13	YGR181W	GLR1	P41921	483 aa	Known RBP	0.04	□□□□□ -2.4
TIM13	YGR181W	CWC21	Q03375	135 aa	Known RBP	0.04	□□□□□ -2.4
TIM13	YGR181W	RPL43A	P0CX25	92 aa	Known RBP	0.03	□□□□□ -2.4
TIM13	YGR181W	RPL43B	P0CX26	92 aa		0.03	□□□□□ -2.4
TIM13	YGR181W	PTC1	P35182	281 aa		0.03	□□□□□ -2.4
TIM13	YGR181W	YEL014C	P39999	101 aa		0.03	□□□□□ -2.4
TIM13	YGR181W	YMR141C	P40211	102 aa		0.03	□□□□□ -2.4
TIM13	YGR181W	LIP1	Q03579	150 aa		0.03	□□□□□ -2.4
TIM13	YGR181W	RPS22A	P0C0W1	130 aa	Known RBP	0.02	□□□□□ -2.41
TIM13	YGR181W	HSP150	P32478	413 aa		0.02	□□□□□ -2.41
TIM13	YGR181W	NUF2	P33895	451 aa		0.02	□□□□□ -2.41
TIM13	YGR181W	ATG8	P38182	117 aa	RIP-Chip data	0.02	□□□□□ -2.41	not detected
TIM13	YGR181W	XPT1	P47165	209 aa		0.02	□□□□□ -2.41
TIM13	YGR181W	ATG10	Q07879	167 aa		0.02	□□□□□ -2.41
TIM13	YGR181W	YOR072W	Q08486	104 aa		0.02	□□□□□ -2.41
TIM13	YGR181W	UIP4	Q08926	304 aa		0.02	□□□□□ -2.41
TIM13	YGR181W	RPS22B	Q3E7Y3	130 aa	Known RBP	0.02	□□□□□ -2.41
TIM13	YGR181W	HAP2	P06774	265 aa		0.01	□□□□□ -2.41
TIM13	YGR181W	YLR157W-E	P0CF00	54 aa		0.01	□□□□□ -2.41
TIM13	YGR181W	UBC6	P33296	250 aa	Predicted RBP	0.01	□□□□□ -2.41
TIM13	YGR181W	YPT31	P38555	223 aa	Known RBP	0.01	□□□□□ -2.41
TIM13	YGR181W	JAC1	P53193	184 aa		0.01	□□□□□ -2.41
TIM13	YGR181W	YPR114W	Q06107	315 aa		0.01	□□□□□ -2.41
TIM13	YGR181W	PEX11	Q12462	236 aa		0.01	□□□□□ -2.41
TIM13	YGR181W	GSC2	P40989	1895 aa		0	□□□□□ -2.41
TIM13	YGR181W	THI74	Q04083	370 aa		0	□□□□□ -2.41
TIM13	YGR181W	YET3	Q07451	203 aa		0	□□□□□ -2.41
TIM13	YGR181W	GRE1	Q08969	168 aa		0	□□□□□ -2.41
TIM13	YGR181W	RIB3	Q99258	208 aa		0	□□□□□ -2.41
TIM13	YGR181W	SEN15	Q04675	128 aa		-0.01	□□□□□ -2.41
TIM13	YGR181W	TOM1	Q03280	3268 aa		-0.01	□□□□□ -2.41
TIM13	YGR181W	BRR2	P32639	2163 aa	Known RBP	-0.02	□□□□□ -2.41
TIM13	YGR181W	YDR102C	Q03864	110 aa		-0.02	□□□□□ -2.41
TIM13	YGR181W	ADE6	P38972	1358 aa	Known RBP	-0.03	□□□□□ -2.41
TIM13	YGR181W	VPS13	Q07878	3144 aa		-0.03	□□□□□ -2.41
TIM13	YGR181W	HYP2	P23301	157 aa	Known RBP	-0.03	□□□□□ -2.41
TIM13	YGR181W	TRR1	P29509	319 aa	Known RBP	-0.03	□□□□□ -2.41
TIM13	YGR181W	ATP7	P30902	174 aa		-0.03	□□□□□ -2.41
TIM13	YGR181W	ECM31	P38122	312 aa		-0.03	□□□□□ -2.41
TIM13	YGR181W	IPT1	P38954	527 aa		-0.03	□□□□□ -2.41
TIM13	YGR181W	YNR064C	P53750	290 aa		-0.03	□□□□□ -2.41
TIM13	YGR181W	HSL1	P34244	1518 aa		-0.03	□□□□□ -2.41

Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms