RNA–Protein interactions for RNA: YGR116W

SPT6, Transcript of Nucleosome remodeling protein, yeastyeast

Gene SPT6, Length 4,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT6YGR116W YIL029CP40538 142 aa3.16□□□□□ -1.9
SPT6YGR116W YPS6P40583 537 aa3.16□□□□□ -1.9
SPT6YGR116W SPG5P42933 373 aa3.16□□□□□ -1.9
SPT6YGR116W LCL3P53153 274 aa3.16□□□□□ -1.9
SPT6YGR116W YGR050CP53231 118 aa3.16□□□□□ -1.9
SPT6YGR116W LPP1Q04396 274 aa3.16□□□□□ -1.9
SPT6YGR116W PHD1P36093 366 aa3.15□□□□□ -1.9
SPT6YGR116W PFS1P38872 237 aa3.15□□□□□ -1.9
SPT6YGR116W SRP14P38985 146 aa3.15□□□□□ -1.9
SPT6YGR116W YDL183CP48569 320 aa3.15□□□□□ -1.9
SPT6YGR116W RDL2Q08742 149 aaKnown RBP3.15□□□□□ -1.9
SPT6YGR116W ATO3Q12359 275 aa3.15□□□□□ -1.9
SPT6YGR116W CCH1P50077 2039 aa3.15□□□□□ -1.91
SPT6YGR116W MDM10P18409 493 aa3.15□□□□□ -1.91
SPT6YGR116W YKR073CP36153 106 aa3.15□□□□□ -1.91
SPT6YGR116W YFR054CP43622 192 aa3.15□□□□□ -1.91
SPT6YGR116W ARC18Q05933 178 aaKnown RBP3.15□□□□□ -1.91
SPT6YGR116W RDL1Q12305 139 aaKnown RBP3.15□□□□□ -1.91
SPT6YGR116W YHR214C-EQ8TGK0 99 aa3.15□□□□□ -1.91
SPT6YGR116W ATP10P18496 279 aa3.15□□□□□ -1.91
SPT6YGR116W PSD1P39006 500 aa3.15□□□□□ -1.91
SPT6YGR116W SNU13P39990 126 aaKnown RBP3.15□□□□□ -1.91
SPT6YGR116W SAS2P40963 338 aa3.15□□□□□ -1.91
SPT6YGR116W YDR102CQ03864 110 aa3.15□□□□□ -1.91
SPT6YGR116W YDL129WQ07555 291 aa3.15□□□□□ -1.91
SPT6YGR116W FIT3Q08907 204 aa3.15□□□□□ -1.91
SPT6YGR116W GEP5Q12393 293 aa3.15□□□□□ -1.91
SPT6YGR116W DUT1P33317 147 aa3.14□□□□□ -1.91
SPT6YGR116W YJR015WP47090 510 aa3.14□□□□□ -1.91
SPT6YGR116W ATP19P81451 68 aa3.14□□□□□ -1.91
SPT6YGR116W THI72Q08579 599 aa3.14□□□□□ -1.91
SPT6YGR116W PRP46Q12417 451 aaPredicted RBP3.14□□□□□ -1.91
SPT6YGR116W NAG1Q8TGN9 163 aa3.14□□□□□ -1.91
SPT6YGR116W SWD3P38123 315 aa3.14□□□□□ -1.91
SPT6YGR116W ICS2P38284 255 aa3.14□□□□□ -1.91
SPT6YGR116W ATX1P38636 73 aa3.14□□□□□ -1.91
SPT6YGR116W YHR173CP38864 112 aa3.14□□□□□ -1.91
SPT6YGR116W ATF1P40353 525 aa3.14□□□□□ -1.91
SPT6YGR116W UBC13P52490 153 aa3.14□□□□□ -1.91
SPT6YGR116W SDS23P53172 527 aa3.14□□□□□ -1.91
SPT6YGR116W WSC2P53832 503 aa3.14□□□□□ -1.91
SPT6YGR116W ATG4P53867 494 aa3.14□□□□□ -1.91
SPT6YGR116W BET5Q03630 159 aa3.14□□□□□ -1.91
SPT6YGR116W SCW10Q04951 389 aa3.14□□□□□ -1.91
SPT6YGR116W UPS1Q05776 175 aa3.14□□□□□ -1.91
SPT6YGR116W SCS22Q6Q595 175 aa3.14□□□□□ -1.91
SPT6YGR116W PAU7P39545 55 aa3.14□□□□□ -1.91
SPT6YGR116W YNL198CP40166 100 aa3.14□□□□□ -1.91
SPT6YGR116W VPS71Q03433 280 aa3.14□□□□□ -1.91
SPT6YGR116W YPS3Q12303 508 aa3.14□□□□□ -1.91
SPT6YGR116W YBR255C-AQ3E776 120 aa3.14□□□□□ -1.91
SPT6YGR116W TAD3Q9URQ3 322 aa3.14□□□□□ -1.91
SPT6YGR116W APS1P35181 156 aa3.14□□□□□ -1.91
SPT6YGR116W YNL208WP40159 199 aaKnown RBP3.14□□□□□ -1.91
SPT6YGR116W OST1P41543 476 aaKnown RBP3.14□□□□□ -1.91
SPT6YGR116W YFL054CP43549 646 aa3.14□□□□□ -1.91
SPT6YGR116W OYE3P41816 400 aaPredicted RBP3.13□□□□□ -1.91
SPT6YGR116W POP3P53833 195 aaPredicted RBP3.13□□□□□ -1.91
SPT6YGR116W YDR391CQ04170 232 aa3.13□□□□□ -1.91
SPT6YGR116W YRA1Q12159 226 aaKnown RBP3.13□□□□□ -1.91
SPT6YGR116W YGL258W-AQ3E740 77 aa3.13□□□□□ -1.91
SPT6YGR116W INO4P13902 151 aa3.13□□□□□ -1.91
SPT6YGR116W HSP150P32478 413 aa3.13□□□□□ -1.91
SPT6YGR116W SOR1P35497 357 aaKnown RBP3.13□□□□□ -1.91
SPT6YGR116W YKL044WP36092 106 aa3.13□□□□□ -1.91
SPT6YGR116W DSK2P48510 373 aa3.13□□□□□ -1.91
SPT6YGR116W CRZ1P53968 678 aa3.13□□□□□ -1.91
SPT6YGR116W SOR2Q07786 357 aa3.13□□□□□ -1.91
SPT6YGR116W COX1P00401 534 aa3.13□□□□□ -1.91
SPT6YGR116W YJR096WP47137 282 aa3.13□□□□□ -1.91
SPT6YGR116W YJR115WP47152 169 aa3.13□□□□□ -1.91
SPT6YGR116W CPD1P53314 239 aa3.13□□□□□ -1.91
SPT6YGR116W TDA7P53882 636 aaPredicted RBP3.13□□□□□ -1.91
SPT6YGR116W DIA1P54005 336 aa3.13□□□□□ -1.91
SPT6YGR116W POC4Q12245 148 aaPredicted RBP3.13□□□□□ -1.91
SPT6YGR116W UTP23Q12339 254 aaKnown RBP3.13□□□□□ -1.91
SPT6YGR116W POM34Q12445 299 aa3.13□□□□□ -1.91
SPT6YGR116W YLR302CO13544 120 aa3.12□□□□□ -1.91
SPT6YGR116W SHO1P40073 367 aa3.12□□□□□ -1.91
SPT6YGR116W YNR071CP53757 342 aa3.12□□□□□ -1.91
SPT6YGR116W ATG21Q02887 496 aa3.12□□□□□ -1.91
SPT6YGR116W POS5Q06892 414 aa3.12□□□□□ -1.91
SPT6YGR116W USV1Q12132 391 aa3.12□□□□□ -1.91
SPT6YGR116W RPL23AP0CX41 137 aaKnown RBP3.12□□□□□ -1.91
SPT6YGR116W RPL23BP0CX42 137 aaKnown RBP3.12□□□□□ -1.91
SPT6YGR116W NIS1P53939 407 aa3.12□□□□□ -1.91
SPT6YGR116W LIP2Q06005 328 aa3.12□□□□□ -1.91
SPT6YGR116W VPS63O13549 108 aa3.12□□□□□ -1.91
SPT6YGR116W CYC3P06182 269 aa3.12□□□□□ -1.91
SPT6YGR116W YMR31P19955 123 aa3.12□□□□□ -1.91
SPT6YGR116W NUD1P32336 851 aa3.12□□□□□ -1.91
SPT6YGR116W YER079WP40052 210 aaKnown RBP3.12□□□□□ -1.91
SPT6YGR116W YDL218WQ07629 317 aa3.12□□□□□ -1.91
SPT6YGR116W GEP3Q08622 556 aa3.12□□□□□ -1.91
SPT6YGR116W YKL023C-AQ2V2P3 75 aa3.12□□□□□ -1.91
SPT6YGR116W YHR214C-DP0CX93 97 aa3.12□□□□□ -1.91
SPT6YGR116W YJL163CP46996 555 aa3.12□□□□□ -1.91
SPT6YGR116W TRS23Q03784 219 aa3.12□□□□□ -1.91
SPT6YGR116W GTO3Q04806 366 aa3.12□□□□□ -1.91
SPT6YGR116W TOM40P23644 387 aaKnown RBP3.11□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 29.5 ms