RNA–Protein interactions for RNA: YER100W

UBC6, Transcript of Ubiquitin-conjugating enzyme involved in ERAD, yeastyeast

Gene UBC6, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC6YER100W YER135CP40082 130 aa3.26□□□□□ -1.89
UBC6YER100W YGL193CP53097 103 aa3.26□□□□□ -1.89
UBC6YER100W DYN2Q02647 92 aa3.26□□□□□ -1.89
UBC6YER100W LIP1Q03579 150 aa3.26□□□□□ -1.89
UBC6YER100W SML1Q04964 104 aa3.26□□□□□ -1.89
UBC6YER100W PRP11Q07350 266 aaPredicted RBP3.26□□□□□ -1.89
UBC6YER100W ATG10Q07879 167 aa3.26□□□□□ -1.89
UBC6YER100W RIB3Q99258 208 aa3.26□□□□□ -1.89
UBC6YER100W MDH2P22133 377 aa3.25□□□□□ -1.89
UBC6YER100W THG1P53215 237 aaKnown RBP3.25□□□□□ -1.89
UBC6YER100W HHO1P53551 258 aa3.25□□□□□ -1.89
UBC6YER100W BUD25P85052 153 aa3.25□□□□□ -1.89
UBC6YER100W YPR174CQ06616 221 aaPredicted RBP3.25□□□□□ -1.89
UBC6YER100W SHB17P36136 271 aaKnown RBP3.24□□□□□ -1.89
UBC6YER100W YNR064CP53750 290 aa3.24□□□□□ -1.89
UBC6YER100W RIM9Q04734 239 aa3.24□□□□□ -1.89
UBC6YER100W YOL162WP0CF19 215 aa3.23□□□□□ -1.89
UBC6YER100W MAK31P23059 88 aa3.23□□□□□ -1.89
UBC6YER100W SPT14P32363 452 aa3.23□□□□□ -1.89
UBC6YER100W GSP2P32836 220 aaKnown RBP3.23□□□□□ -1.89
UBC6YER100W TMA19P35691 167 aaKnown RBP3.23□□□□□ -1.89
UBC6YER100W YPT31P38555 223 aaKnown RBP3.23□□□□□ -1.89
UBC6YER100W PRS3P38689 320 aaKnown RBP3.23□□□□□ -1.89
UBC6YER100W YJL218WP40892 196 aaKnown RBP3.23□□□□□ -1.89
UBC6YER100W GPI2P46961 280 aa3.23□□□□□ -1.89
UBC6YER100W DAN1P47178 298 aa3.23□□□□□ -1.89
UBC6YER100W PIR1Q03178 341 aa3.23□□□□□ -1.89
UBC6YER100W YPR114WQ06107 315 aa3.23□□□□□ -1.89
UBC6YER100W HSP12P22943 109 aaKnown RBP3.22□□□□□ -1.89
UBC6YER100W YHL018WP38744 120 aaPredicted RBP3.22□□□□□ -1.89
UBC6YER100W AYR1P40471 297 aa3.22□□□□□ -1.89
UBC6YER100W NSE4P43124 402 aa3.22□□□□□ -1.89
UBC6YER100W FMN1Q03778 218 aa3.22□□□□□ -1.89
UBC6YER100W YHP1Q04116 353 aa3.22□□□□□ -1.89
UBC6YER100W BOL1Q3E793 110 aa3.22□□□□□ -1.89
UBC6YER100W RAD50P12753 1312 aa3.21□□□□□ -1.89
UBC6YER100W GPA2P10823 449 aa3.21□□□□□ -1.9
UBC6YER100W NHP6AP11632 93 aaKnown RBP3.21□□□□□ -1.9
UBC6YER100W DDR48P18899 430 aaKnown RBP3.21□□□□□ -1.9
UBC6YER100W TIM8P57744 87 aa3.21□□□□□ -1.9
UBC6YER100W ATG41Q12048 136 aa3.21□□□□□ -1.9
UBC6YER100W SRP21P32342 167 aa3.2□□□□□ -1.9
UBC6YER100W APS3P47064 194 aa3.2□□□□□ -1.9
UBC6YER100W RGM1Q00453 211 aa3.2□□□□□ -1.9
UBC6YER100W UPS1Q05776 175 aa3.2□□□□□ -1.9
UBC6YER100W CNL1Q06333 122 aa3.2□□□□□ -1.9
UBC6YER100W COX8P04039 78 aa3.19□□□□□ -1.9
UBC6YER100W SEN2P16658 377 aa3.19□□□□□ -1.9
UBC6YER100W MRS4P23500 304 aa3.19□□□□□ -1.9
UBC6YER100W NRG2P38082 220 aa3.19□□□□□ -1.9
UBC6YER100W PEP8P40335 379 aa3.19□□□□□ -1.9
UBC6YER100W EST3Q03096 181 aa3.19□□□□□ -1.9
UBC6YER100W YML079WQ03629 201 aa3.19□□□□□ -1.9
UBC6YER100W UPS3Q04006 179 aa3.19□□□□□ -1.9
UBC6YER100W RFU1Q08003 200 aa3.19□□□□□ -1.9
UBC6YER100W MDM35O60200 86 aa3.18□□□□□ -1.9
UBC6YER100W SPS2P08459 502 aa3.18□□□□□ -1.9
UBC6YER100W INO4P13902 151 aa3.18□□□□□ -1.9
UBC6YER100W GLC8P41818 229 aa3.18□□□□□ -1.9
UBC6YER100W NKP2Q06162 153 aa3.18□□□□□ -1.9
UBC6YER100W RRT7Q07829 113 aa3.18□□□□□ -1.9
UBC6YER100W UIP4Q08926 304 aa3.18□□□□□ -1.9
UBC6YER100W AHT1P29589 182 aa3.17□□□□□ -1.9
UBC6YER100W SUI1P32911 108 aaKnown RBP3.17□□□□□ -1.9
UBC6YER100W CIN5P40917 295 aa3.17□□□□□ -1.9
UBC6YER100W ALB1P47019 175 aaPredicted RBP3.17□□□□□ -1.9
UBC6YER100W YGR017WP53210 297 aa3.17□□□□□ -1.9
UBC6YER100W YDR278CQ05612 105 aa3.17□□□□□ -1.9
UBC6YER100W YHR007C-AQ07074 71 aa3.17□□□□□ -1.9
UBC6YER100W SPC3Q12133 184 aa3.17□□□□□ -1.9
UBC6YER100W FAB1P34756 2278 aa3.17□□□□□ -1.9
UBC6YER100W CCS1P40202 249 aaKnown RBP3.16□□□□□ -1.9
UBC6YER100W MPM1P40364 252 aa3.16□□□□□ -1.9
UBC6YER100W MOB1P40484 314 aa3.16□□□□□ -1.9
UBC6YER100W GEP7P53171 287 aa3.16□□□□□ -1.9
UBC6YER100W YNL019CP53975 284 aa3.16□□□□□ -1.9
UBC6YER100W WIP1Q2V2P8 89 aa3.16□□□□□ -1.9
UBC6YER100W SCS22Q6Q595 175 aa3.16□□□□□ -1.9
UBC6YER100W NOP1P15646 327 aaKnown RBP3.15□□□□□ -1.91
UBC6YER100W HYM1P32464 399 aa3.15□□□□□ -1.91
UBC6YER100W RPS20P38701 121 aaKnown RBP3.15□□□□□ -1.91
UBC6YER100W MSB2P32334 1306 aa3.15□□□□□ -1.91
UBC6YER100W FMP49A0A023PZB3 126 aa3.14□□□□□ -1.91
UBC6YER100W MRP49P32388 137 aa3.14□□□□□ -1.91
UBC6YER100W YKR045CP36138 183 aa3.14□□□□□ -1.91
UBC6YER100W YHR140WP38842 239 aa3.14□□□□□ -1.91
UBC6YER100W HPA3P39979 161 aa3.14□□□□□ -1.91
UBC6YER100W VMA10P48836 114 aaKnown RBP3.14□□□□□ -1.91
UBC6YER100W ATP19P81451 68 aa3.14□□□□□ -1.91
UBC6YER100W FIT2Q08906 153 aa3.14□□□□□ -1.91
UBC6YER100W YMR030W-AQ3E760 96 aa3.14□□□□□ -1.91
UBC6YER100W RPL14AP36105 138 aaKnown RBP3.13□□□□□ -1.91
UBC6YER100W RPL14BP38754 138 aaKnown RBP3.13□□□□□ -1.91
UBC6YER100W RCF2P53721 224 aa3.13□□□□□ -1.91
UBC6YER100W SDH7Q04401 133 aa3.13□□□□□ -1.91
UBC6YER100W SPC24Q04477 213 aa3.13□□□□□ -1.91
UBC6YER100W FCY1Q12178 158 aa3.13□□□□□ -1.91
UBC6YER100W YGR269WP40326 108 aa3.12□□□□□ -1.91
UBC6YER100W CSI2Q08054 341 aa3.12□□□□□ -1.91
UBC6YER100W STF2P16965 84 aa3.11□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms