RNA–Protein interactions for RNA: YDR484W

VPS52, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS52, Length 1,926 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS52YDR484W NUF2P33895 451 aa0.68□□□□□ -2.3
VPS52YDR484W CPR5P35176 225 aa0.68□□□□□ -2.3
VPS52YDR484W YML079WQ03629 201 aa0.68□□□□□ -2.3
VPS52YDR484W YEL073CP39974 107 aa0.67□□□□□ -2.3
VPS52YDR484W YJR015WP47090 510 aa0.67□□□□□ -2.3
VPS52YDR484W PAC10P48363 199 aa0.67□□□□□ -2.3
VPS52YDR484W HRD1Q08109 551 aa0.67□□□□□ -2.3
VPS52YDR484W HFA1P32874 2273 aa0.66□□□□□ -2.3
VPS52YDR484W TRM3Q07527 1436 aa0.66□□□□□ -2.3
VPS52YDR484W YKR070WP36151 352 aaKnown RBP0.66□□□□□ -2.3
VPS52YDR484W NQM1P53228 333 aaPredicted RBP0.66□□□□□ -2.3
VPS52YDR484W YDL157CQ12082 118 aa0.66□□□□□ -2.3
VPS52YDR484W SHB17P36136 271 aaKnown RBP0.66□□□□□ -2.3
VPS52YDR484W YGR269WP40326 108 aa0.66□□□□□ -2.3
VPS52YDR484W SOL1P50278 321 aa0.66□□□□□ -2.3
VPS52YDR484W YGL230CP53074 147 aa0.66□□□□□ -2.3
VPS52YDR484W YDC1Q02896 317 aa0.66□□□□□ -2.3
VPS52YDR484W EGD2P38879 174 aaKnown RBP0.65□□□□□ -2.31
VPS52YDR484W SYM1Q06563 197 aa0.65□□□□□ -2.31
VPS52YDR484W YLR050CQ12155 161 aaKnown RBP0.65□□□□□ -2.31
VPS52YDR484W RAD51P25454 400 aa0.64□□□□□ -2.31
VPS52YDR484W KEI1Q06346 221 aa0.64□□□□□ -2.31
VPS52YDR484W GRE1Q08969 168 aa0.64□□□□□ -2.31
VPS52YDR484W RIF1P29539 1916 aa0.64□□□□□ -2.31
VPS52YDR484W SRP14P38985 146 aa0.64□□□□□ -2.31
VPS52YDR484W YEL028WP39989 153 aa0.64□□□□□ -2.31
VPS52YDR484W YIP3P53633 176 aa0.64□□□□□ -2.31
VPS52YDR484W ATG38Q05789 226 aaKnown RBP0.64□□□□□ -2.31
VPS52YDR484W CMD1P06787 147 aaKnown RBP0.63□□□□□ -2.31
VPS52YDR484W SPS2P08459 502 aa0.63□□□□□ -2.31
VPS52YDR484W RPS25BP0C0T4 108 aaKnown RBP0.63□□□□□ -2.31
VPS52YDR484W LIP1Q03579 150 aa0.63□□□□□ -2.31
VPS52YDR484W AVO2Q04749 426 aa0.63□□□□□ -2.31
VPS52YDR484W RPS25AQ3E792 108 aaPredicted RBP0.63□□□□□ -2.31
VPS52YDR484W TMA23Q03525 211 aa0.62□□□□□ -2.31
VPS52YDR484W UIP4Q08926 304 aa0.62□□□□□ -2.31
VPS52YDR484W FCY1Q12178 158 aa0.62□□□□□ -2.31
VPS52YDR484W PRP8P33334 2413 aaKnown RBP0.62□□□□□ -2.31
VPS52YDR484W KIN28P06242 306 aa0.62□□□□□ -2.31
VPS52YDR484W UBC6P33296 250 aaPredicted RBP0.62□□□□□ -2.31
VPS52YDR484W APS3P47064 194 aa0.62□□□□□ -2.31
VPS52YDR484W GEP7P53171 287 aa0.62□□□□□ -2.31
VPS52YDR484W THI74Q04083 370 aa0.62□□□□□ -2.31
VPS52YDR484W SRP102P36057 244 aaPredicted RBP0.61□□□□□ -2.31
VPS52YDR484W TMA20P89886 181 aaPredicted RBP0.61□□□□□ -2.31
VPS52YDR484W ATG10Q07879 167 aa0.61□□□□□ -2.31
VPS52YDR484W PTC1P35182 281 aa0.6□□□□□ -2.31
VPS52YDR484W CSH1P38287 376 aa0.6□□□□□ -2.31
VPS52YDR484W CIN5P40917 295 aa0.6□□□□□ -2.31
VPS52YDR484W YNL140CP53910 189 aa0.6□□□□□ -2.31
VPS52YDR484W INO4P13902 151 aa0.6□□□□□ -2.31
VPS52YDR484W YCR001WP25347 104 aa0.6□□□□□ -2.31
VPS52YDR484W VAM10Q08474 114 aa0.6□□□□□ -2.31
VPS52YDR484W TAF2P23255 1407 aa0.59□□□□□ -2.31
VPS52YDR484W HSK3P69852 69 aa0.59□□□□□ -2.32
VPS52YDR484W RPL35AP0CX84 120 aaKnown RBP0.58□□□□□ -2.32
VPS52YDR484W RPL35BP0CX85 120 aaKnown RBP0.58□□□□□ -2.32
VPS52YDR484W SPT14P32363 452 aa0.58□□□□□ -2.32
VPS52YDR484W VPS51P36116 164 aa0.58□□□□□ -2.32
VPS52YDR484W YPT31P38555 223 aaKnown RBP0.58□□□□□ -2.32
VPS52YDR484W GLC8P41818 229 aa0.58□□□□□ -2.32
VPS52YDR484W YPR114WQ06107 315 aa0.58□□□□□ -2.32
VPS52YDR484W YOL013W-AP0C272 63 aaPredicted RBP0.58□□□□□ -2.32
VPS52YDR484W YGL101WP53144 215 aa0.58□□□□□ -2.32
VPS52YDR484W YNR064CP53750 290 aa0.58□□□□□ -2.32
VPS52YDR484W YDL241WQ07738 123 aa0.58□□□□□ -2.32
VPS52YDR484W YBR027CP38220 110 aa0.57□□□□□ -2.32
VPS52YDR484W YEL014CP39999 101 aa0.57□□□□□ -2.32
VPS52YDR484W YDR102CQ03864 110 aa0.57□□□□□ -2.32
VPS52YDR484W GIM5Q04493 163 aa0.57□□□□□ -2.32
VPS52YDR484W ADE6P38972 1358 aaKnown RBP0.57□□□□□ -2.32
VPS52YDR484W ATP5P09457 212 aa0.56□□□□□ -2.32
VPS52YDR484W ECM31P38122 312 aa0.56□□□□□ -2.32
VPS52YDR484W YLR046CQ12253 270 aa0.56□□□□□ -2.32
VPS52YDR484W YHR213W-BQ8TGK1 99 aa0.56□□□□□ -2.32
VPS52YDR484W CCC1P47818 322 aa0.56□□□□□ -2.32
VPS52YDR484W CDC39P25655 2108 aaKnown RBP0.55□□□□□ -2.32
VPS52YDR484W HTD2P38790 280 aaKnown RBP0.55□□□□□ -2.32
VPS52YDR484W MAK3Q03503 176 aa0.55□□□□□ -2.32
VPS52YDR484W YLR053CQ12026 108 aa0.55□□□□□ -2.32
VPS52YDR484W SPA2P23201 1466 aaKnown RBP0.54□□□□□ -2.32
VPS52YDR484W HYP2P23301 157 aaKnown RBP0.54□□□□□ -2.32
VPS52YDR484W YDR476CQ03362 224 aa0.54□□□□□ -2.32
VPS52YDR484W YOR072WQ08486 104 aa0.54□□□□□ -2.32
VPS52YDR484W RDI1Q12434 202 aa0.54□□□□□ -2.32
VPS52YDR484W CMC4Q3E7A9 73 aa0.54□□□□□ -2.32
VPS52YDR484W CHD1P32657 1468 aa0.54□□□□□ -2.32
VPS52YDR484W FES1P38260 290 aa0.54□□□□□ -2.32
VPS52YDR484W HHY1P39982 102 aa0.54□□□□□ -2.32
VPS52YDR484W YNL122CP53921 115 aaPredicted RBP0.54□□□□□ -2.32
VPS52YDR484W LSM3P57743 89 aaKnown RBP0.54□□□□□ -2.32
VPS52YDR484W NMA1Q06178 401 aaKnown RBP0.54□□□□□ -2.32
VPS52YDR484W YGL041W-AP0C5N3 154 aa0.53□□□□□ -2.32
VPS52YDR484W UBI4P0CG63 381 aaKnown RBP0.53□□□□□ -2.32
VPS52YDR484W HSP150P32478 413 aa0.53□□□□□ -2.32
VPS52YDR484W DLS1P40366 167 aa0.53□□□□□ -2.32
VPS52YDR484W ORM1P53224 222 aa0.53□□□□□ -2.32
VPS52YDR484W SAC3P46674 1301 aa0.53□□□□□ -2.32
VPS52YDR484W YBR056W-AI2HB52 66 aa0.52□□□□□ -2.33
VPS52YDR484W ATG8P38182 117 aaRIP-Chip data0.52□□□□□ -2.33not detected
Retrieved 100 of 5,963 RNA–protein pairs in 90.1 ms