RNA–Protein interactions for RNA: YDR452W

PPN1, Transcript of Vacuolar endopolyphosphatase with a role in phosphate metabolism, yeast

Gene PPN1, Length 2,025 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PPN1	YDR452W	UPS3	Q04006	179 aa		0.64	□□□□□ -2.31
PPN1	YDR452W	YDR391C	Q04170	232 aa		0.64	□□□□□ -2.31
PPN1	YDR452W	SHH3	Q04487	196 aa		0.64	□□□□□ -2.31
PPN1	YDR452W	RRP5	Q05022	1729 aa	Known RBP	0.64	□□□□□ -2.31
PPN1	YDR452W	GIS3	Q12418	502 aa		0.64	□□□□□ -2.31
PPN1	YDR452W	FAS1	P07149	2051 aa	Known RBP	0.64	□□□□□ -2.31
PPN1	YDR452W	APC1	P53886	1748 aa		0.64	□□□□□ -2.31
PPN1	YDR452W	ROM2	P51862	1356 aa	Known RBP	0.64	□□□□□ -2.31
PPN1	YDR452W	AIM2	P39721	246 aa		0.64	□□□□□ -2.31
PPN1	YDR452W	MTW1	P39731	289 aa		0.64	□□□□□ -2.31
PPN1	YDR452W	NOP19	P53317	196 aa	Predicted RBP	0.64	□□□□□ -2.31
PPN1	YDR452W	BNA7	Q04066	261 aa		0.64	□□□□□ -2.31
PPN1	YDR452W	RNH1	Q04740	348 aa		0.64	□□□□□ -2.31
PPN1	YDR452W	YCL012C	Q8J0M4	134 aa		0.64	□□□□□ -2.31
PPN1	YDR452W	HTB1	P02293	131 aa	Known RBP	0.63	□□□□□ -2.31
PPN1	YDR452W	HTB2	P02294	131 aa		0.63	□□□□□ -2.31
PPN1	YDR452W	ALB1	P47019	175 aa	Predicted RBP	0.63	□□□□□ -2.31
PPN1	YDR452W	NAT3	Q06504	195 aa		0.63	□□□□□ -2.31
PPN1	YDR452W	PDR12	Q02785	1511 aa		0.63	□□□□□ -2.31
PPN1	YDR452W	ARO7	P32178	256 aa		0.62	□□□□□ -2.31
PPN1	YDR452W	SFK1	P35735	353 aa		0.62	□□□□□ -2.31
PPN1	YDR452W	PAM17	P36147	197 aa		0.62	□□□□□ -2.31
PPN1	YDR452W	FMP23	P38231	175 aa		0.62	□□□□□ -2.31
PPN1	YDR452W	RFC4	P40339	323 aa	Known RBP	0.62	□□□□□ -2.31
PPN1	YDR452W	YNL033W	P53964	284 aa		0.62	□□□□□ -2.31
PPN1	YDR452W	DIG2	Q03373	323 aa	Known RBP	0.62	□□□□□ -2.31
PPN1	YDR452W	YOL014W	Q08110	124 aa		0.62	□□□□□ -2.31
PPN1	YDR452W	TY1B-DR3	Q99231	1755 aa		0.62	□□□□□ -2.31
PPN1	YDR452W	FIG2	P25653	1609 aa		0.62	□□□□□ -2.31
PPN1	YDR452W	TIR1	P10863	254 aa		0.62	□□□□□ -2.31
PPN1	YDR452W	SEN2	P16658	377 aa		0.62	□□□□□ -2.31
PPN1	YDR452W	MGT1	P26188	188 aa		0.62	□□□□□ -2.31
PPN1	YDR452W	YJR111C	P47148	283 aa	Known RBP	0.62	□□□□□ -2.31
PPN1	YDR452W	YMR315W	Q04869	349 aa	Known RBP	0.62	□□□□□ -2.31
PPN1	YDR452W	YPR203W	Q08994	102 aa		0.62	□□□□□ -2.31
PPN1	YDR452W	YML100W-A	Q8TGT0	57 aa		0.62	□□□□□ -2.31
PPN1	YDR452W	IDP1	P21954	428 aa	Known RBP	0.61	□□□□□ -2.31
PPN1	YDR452W	UBC8	P28263	218 aa		0.61	□□□□□ -2.31
PPN1	YDR452W	MRPL15	P36523	253 aa		0.61	□□□□□ -2.31
PPN1	YDR452W	PDS1	P40316	373 aa	Predicted RBP	0.61	□□□□□ -2.31
PPN1	YDR452W	YLR031W	Q07978	186 aa		0.61	□□□□□ -2.31
PPN1	YDR452W	STP22	P25604	385 aa		0.6	□□□□□ -2.31
PPN1	YDR452W	GSP2	P32836	220 aa	Known RBP	0.6	□□□□□ -2.31
PPN1	YDR452W	YBR242W	P38331	238 aa		0.6	□□□□□ -2.31
PPN1	YDR452W	TDA4	P47153	279 aa		0.6	□□□□□ -2.31
PPN1	YDR452W	MMS2	P53152	137 aa		0.6	□□□□□ -2.31
PPN1	YDR452W	YNL184C	P53876	108 aa		0.6	□□□□□ -2.31
PPN1	YDR452W	YMR253C	Q04835	414 aa		0.6	□□□□□ -2.31
PPN1	YDR452W	PST2	Q12335	198 aa	Known RBP	0.6	□□□□□ -2.31
PPN1	YDR452W	FKS3	Q04952	1785 aa		0.6	□□□□□ -2.31
PPN1	YDR452W	POL2	P21951	2222 aa	Known RBP	0.6	□□□□□ -2.31
PPN1	YDR452W	SNF4	P12904	322 aa		0.6	□□□□□ -2.31
PPN1	YDR452W	TRA1	P38811	3744 aa		0.59	□□□□□ -2.31
PPN1	YDR452W	SPC25	P40014	221 aa		0.59	□□□□□ -2.31
PPN1	YDR452W	CUP9	P41817	306 aa		0.59	□□□□□ -2.31
PPN1	YDR452W	YFL019C	P43576	117 aa		0.59	□□□□□ -2.31
PPN1	YDR452W	YLR036C	Q07986	203 aa		0.59	□□□□□ -2.31
PPN1	YDR452W	ABP140	Q08641	628 aa	Known RBP	0.59	□□□□□ -2.31
PPN1	YDR452W	TY3B-I	Q7LHG5	1498 aa	Known RBP	0.59	□□□□□ -2.32
PPN1	YDR452W	UGX2	P32772	223 aa		0.59	□□□□□ -2.32
PPN1	YDR452W	ARO80	Q04052	950 aa		0.59	□□□□□ -2.32
PPN1	YDR452W	YMR226C	Q05016	267 aa	Known RBP	0.59	□□□□□ -2.32
PPN1	YDR452W	LAA1	P39526	2014 aa		0.58	□□□□□ -2.32
PPN1	YDR452W	RPB4	P20433	221 aa	Predicted RBP	0.58	□□□□□ -2.32
PPN1	YDR452W	YHL037C	P38733	133 aa		0.58	□□□□□ -2.32
PPN1	YDR452W	TIM11	P81449	96 aa	Predicted RBP	0.58	□□□□□ -2.32
PPN1	YDR452W	MET31	Q03081	177 aa		0.58	□□□□□ -2.32
PPN1	YDR452W	TAR1	Q8TGM6	124 aa		0.58	□□□□□ -2.32
PPN1	YDR452W	FLO1	P32768	1537 aa		0.57	□□□□□ -2.32
PPN1	YDR452W	QCR7	P00128	127 aa		0.57	□□□□□ -2.32
PPN1	YDR452W	CBF1	P17106	351 aa		0.57	□□□□□ -2.32
PPN1	YDR452W	MPM1	P40364	252 aa		0.57	□□□□□ -2.32
PPN1	YDR452W	MRPS17	Q03246	237 aa	Predicted RBP	0.57	□□□□□ -2.32
PPN1	YDR452W	VPS71	Q03433	280 aa		0.57	□□□□□ -2.32
PPN1	YDR452W	GET4	Q12125	312 aa		0.57	□□□□□ -2.32
PPN1	YDR452W	TY4B-J	P47024	1803 aa		0.57	□□□□□ -2.32
PPN1	YDR452W	YCR023C	P25351	611 aa		0.57	□□□□□ -2.32
PPN1	YDR452W	MAK5	P38112	773 aa	Predicted RBP	0.57	□□□□□ -2.32
PPN1	YDR452W	GPI14	P47088	403 aa	Known RBP	0.57	□□□□□ -2.32
PPN1	YDR452W	RRP17	Q04031	235 aa	Predicted RBP	0.57	□□□□□ -2.32
PPN1	YDR452W	JIP3	O13555	125 aa		0.56	□□□□□ -2.32
PPN1	YDR452W	MATALPHA2	P0CY08	210 aa		0.56	□□□□□ -2.32
PPN1	YDR452W	HMLALPHA2	P0CY09	210 aa		0.56	□□□□□ -2.32
PPN1	YDR452W	IGO2	Q9P305	131 aa		0.56	□□□□□ -2.32
PPN1	YDR452W	TY4B-H	P0C2J7	1802 aa		0.56	□□□□□ -2.32
PPN1	YDR452W	ETR1	P38071	380 aa		0.55	□□□□□ -2.32
PPN1	YDR452W	YOR015W	Q12169	119 aa		0.55	□□□□□ -2.32
PPN1	YDR452W	ATP20	Q12233	115 aa		0.55	□□□□□ -2.32
PPN1	YDR452W	ADF1	Q2V2Q1	113 aa		0.55	□□□□□ -2.32
PPN1	YDR452W	STF2	P16965	84 aa		0.55	□□□□□ -2.32
PPN1	YDR452W	AHT1	P29589	182 aa		0.55	□□□□□ -2.32
PPN1	YDR452W	NTG1	P31378	399 aa		0.55	□□□□□ -2.32
PPN1	YDR452W	TMA22	P47089	198 aa	Predicted RBP	0.55	□□□□□ -2.32
PPN1	YDR452W	YGL235W	P53071	178 aa		0.55	□□□□□ -2.32
PPN1	YDR452W	YLR419W	Q06698	1435 aa	Known RBP	0.55	□□□□□ -2.32
PPN1	YDR452W	YBL010C	P32788	280 aa		0.54	□□□□□ -2.32
PPN1	YDR452W	YKT6	P36015	200 aa	Known RBP	0.54	□□□□□ -2.32
PPN1	YDR452W	NSG1	P38837	291 aa		0.54	□□□□□ -2.32
PPN1	YDR452W	YFL051C	P43552	160 aa		0.54	□□□□□ -2.32
PPN1	YDR452W	YHP1	Q04116	353 aa		0.54	□□□□□ -2.32

Retrieved 100 of 5,963 RNA–protein pairs in 8.7 ms