RNA–Protein interactions for RNA: YDR364C

CDC40, Transcript of Pre-mRNA splicing factor, yeastyeast

Gene CDC40, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC40YDR364C CCS1P40202 249 aaKnown RBP2.65□□□□□ -1.98
CDC40YDR364C YMR144WP40214 342 aaKnown RBP2.65□□□□□ -1.98
CDC40YDR364C BMT5P40493 336 aa2.65□□□□□ -1.98
CDC40YDR364C SNX4P47057 423 aa2.65□□□□□ -1.98
CDC40YDR364C SOL1P50278 321 aa2.65□□□□□ -1.98
CDC40YDR364C SLX9P53251 210 aaPredicted RBP2.65□□□□□ -1.98
CDC40YDR364C CRZ1P53968 678 aa2.65□□□□□ -1.98
CDC40YDR364C ACT1P60010 375 aaKnown RBP2.65□□□□□ -1.98
CDC40YDR364C DID2P69771 204 aa2.65□□□□□ -1.98
CDC40YDR364C YMR279CQ03263 540 aa2.65□□□□□ -1.98
CDC40YDR364C ARC18Q05933 178 aaKnown RBP2.65□□□□□ -1.98
CDC40YDR364C YCT1Q12235 531 aa2.65□□□□□ -1.98
CDC40YDR364C BBP1Q12365 385 aa2.65□□□□□ -1.98
CDC40YDR364C YLR146W-AQ2V2P1 62 aa2.65□□□□□ -1.98
CDC40YDR364C YCL021W-AQ96VH3 125 aa2.65□□□□□ -1.98
CDC40YDR364C QCR2P07257 368 aa2.64□□□□□ -1.99
CDC40YDR364C PET494P07390 489 aaPredicted RBP2.64□□□□□ -1.99
CDC40YDR364C RPB7P34087 171 aa2.64□□□□□ -1.99
CDC40YDR364C SWD3P38123 315 aa2.64□□□□□ -1.99
CDC40YDR364C ERV15P38312 142 aa2.64□□□□□ -1.99
CDC40YDR364C YHL037CP38733 133 aa2.64□□□□□ -1.99
CDC40YDR364C YJR111CP47148 283 aaKnown RBP2.64□□□□□ -1.99
CDC40YDR364C BNS1P50084 137 aa2.64□□□□□ -1.99
CDC40YDR364C SED1Q01589 338 aa2.64□□□□□ -1.99
CDC40YDR364C VPS28Q02767 242 aa2.64□□□□□ -1.99
CDC40YDR364C THI74Q04083 370 aa2.64□□□□□ -1.99
CDC40YDR364C YDR114CQ04597 100 aa2.64□□□□□ -1.99
CDC40YDR364C ANT1Q06497 328 aa2.64□□□□□ -1.99
CDC40YDR364C RRT7Q07829 113 aa2.64□□□□□ -1.99
CDC40YDR364C YOL029CQ08187 201 aa2.64□□□□□ -1.99
CDC40YDR364C JID1Q12350 301 aa2.64□□□□□ -1.99
CDC40YDR364C YOR192C-CQ3E736 78 aa2.64□□□□□ -1.99
CDC40YDR364C CMC2Q3E7A4 109 aa2.64□□□□□ -1.99
CDC40YDR364C YLR365WQ7LIF2 110 aa2.64□□□□□ -1.99
CDC40YDR364C YDR157WA0A023PZE8 133 aa2.63□□□□□ -1.99
CDC40YDR364C RPL39P04650 51 aa2.63□□□□□ -1.99
CDC40YDR364C ERG2P32352 222 aa2.63□□□□□ -1.99
CDC40YDR364C YGP1P38616 354 aaKnown RBP2.63□□□□□ -1.99
CDC40YDR364C GCV3P39726 170 aaPredicted RBP2.63□□□□□ -1.99
CDC40YDR364C SEC72P39742 193 aaKnown RBP2.63□□□□□ -1.99
CDC40YDR364C RMD6P39975 231 aa2.63□□□□□ -1.99
CDC40YDR364C YER121WP40076 114 aa2.63□□□□□ -1.99
CDC40YDR364C RPL13BP40212 199 aaKnown RBP2.63□□□□□ -1.99
CDC40YDR364C GON7P46984 123 aa2.63□□□□□ -1.99
CDC40YDR364C YNR066CP53752 436 aa2.63□□□□□ -1.99
CDC40YDR364C FIT1Q04433 528 aa2.63□□□□□ -1.99
CDC40YDR364C RIM9Q04734 239 aa2.63□□□□□ -1.99
CDC40YDR364C LIP2Q06005 328 aa2.63□□□□□ -1.99
CDC40YDR364C YOL118CQ08259 102 aa2.63□□□□□ -1.99
CDC40YDR364C YOR292CQ08743 309 aa2.63□□□□□ -1.99
CDC40YDR364C FCF2Q12035 217 aaPredicted RBP2.63□□□□□ -1.99
CDC40YDR364C PPT2Q12036 173 aa2.63□□□□□ -1.99
CDC40YDR364C RPL21BQ12672 160 aaKnown RBP2.63□□□□□ -1.99
CDC40YDR364C RPL13AQ12690 199 aaPredicted RBP2.63□□□□□ -1.99
CDC40YDR364C YER078W-AQ3E7A2 54 aa2.63□□□□□ -1.99
CDC40YDR364C YPR108W-AQ3E7B3 70 aa2.63□□□□□ -1.99
CDC40YDR364C YMR316C-AI2HB70 103 aa2.62□□□□□ -1.99
CDC40YDR364C UBI4P0CG63 381 aaKnown RBP2.62□□□□□ -1.99
CDC40YDR364C BGL2P15703 313 aaKnown RBP2.62□□□□□ -1.99
CDC40YDR364C ALK2P32789 676 aaPredicted RBP2.62□□□□□ -1.99
CDC40YDR364C YBL059WP34224 193 aa2.62□□□□□ -1.99
CDC40YDR364C ECM14P38836 430 aa2.62□□□□□ -1.99
CDC40YDR364C ASP1P38986 381 aaPredicted RBP2.62□□□□□ -1.99
CDC40YDR364C OXA1P39952 402 aa2.62□□□□□ -1.99
CDC40YDR364C RFC2P40348 353 aa2.62□□□□□ -1.99
CDC40YDR364C XPT1P47165 209 aa2.62□□□□□ -1.99
CDC40YDR364C HSK3P69852 69 aa2.62□□□□□ -1.99
CDC40YDR364C PRP11Q07350 266 aaPredicted RBP2.62□□□□□ -1.99
CDC40YDR364C IRC25Q07951 179 aa2.62□□□□□ -1.99
CDC40YDR364C RFM1Q12192 310 aa2.62□□□□□ -1.99
CDC40YDR364C DGK1Q12382 290 aa2.62□□□□□ -1.99
CDC40YDR364C HUG1Q6Q5K6 68 aa2.62□□□□□ -1.99
CDC40YDR364C SRY1P36007 326 aa2.61□□□□□ -1.99
CDC40YDR364C IKI1P38874 309 aa2.61□□□□□ -1.99
CDC40YDR364C YEA6P39953 335 aa2.61□□□□□ -1.99
CDC40YDR364C PIR5P46999 287 aa2.61□□□□□ -1.99
CDC40YDR364C TTI2P47168 421 aa2.61□□□□□ -1.99
CDC40YDR364C UBC12P52491 188 aa2.61□□□□□ -1.99
CDC40YDR364C ALG13P53178 202 aa2.61□□□□□ -1.99
CDC40YDR364C YNL046WP53956 172 aa2.61□□□□□ -1.99
CDC40YDR364C RPL21AQ02753 160 aaKnown RBP2.61□□□□□ -1.99
CDC40YDR364C EST3Q03096 181 aa2.61□□□□□ -1.99
CDC40YDR364C ADD37Q03233 198 aa2.61□□□□□ -1.99
CDC40YDR364C YMR090WQ04304 227 aaKnown RBP2.61□□□□□ -1.99
CDC40YDR364C LPP1Q04396 274 aa2.61□□□□□ -1.99
CDC40YDR364C GIM5Q04493 163 aa2.61□□□□□ -1.99
CDC40YDR364C YDR115WQ04598 105 aa2.61□□□□□ -1.99
CDC40YDR364C ATP14Q12349 124 aa2.61□□□□□ -1.99
CDC40YDR364C CYR1P08678 2026 aaKnown RBP2.61□□□□□ -1.99
CDC40YDR364C MRS4P23500 304 aa2.61□□□□□ -1.99
CDC40YDR364C EMP24P32803 203 aaKnown RBP2.61□□□□□ -1.99
CDC40YDR364C SLM6P38343 150 aa2.61□□□□□ -1.99
CDC40YDR364C YIL012WP40551 113 aa2.61□□□□□ -1.99
CDC40YDR364C GLR1P41921 483 aaKnown RBP2.61□□□□□ -1.99
CDC40YDR364C MIC26P50087 233 aa2.61□□□□□ -1.99
CDC40YDR364C YGL262WP53054 175 aa2.61□□□□□ -1.99
CDC40YDR364C GEP7P53171 287 aa2.61□□□□□ -1.99
CDC40YDR364C SDS23P53172 527 aa2.61□□□□□ -1.99
CDC40YDR364C DIA1P54005 336 aa2.61□□□□□ -1.99
CDC40YDR364C YPD1Q07688 167 aa2.61□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 37.6 ms