RNA–Protein interactions for RNA: YDL223C

HBT1, Transcript of Shmoo tip protein, substrate of Hub1p ubiquitin-like protein, yeast

Gene HBT1, Length 3,141 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HBT1	YDL223C	SPO73	P40031	143 aa		2.26	□□□□□ -2.05
HBT1	YDL223C	PRM8	P53174	237 aa		2.26	□□□□□ -2.05
HBT1	YDL223C	YNG1	Q08465	219 aa		2.26	□□□□□ -2.05
HBT1	YDL223C	MMS2	P53152	137 aa		2.26	□□□□□ -2.05
HBT1	YDL223C	YDR248C	Q03786	193 aa		2.26	□□□□□ -2.05
HBT1	YDL223C	GAL83	Q04739	417 aa		2.26	□□□□□ -2.05
HBT1	YDL223C	UIP4	Q08926	304 aa		2.26	□□□□□ -2.05
HBT1	YDL223C	SOD1	P00445	154 aa	Known RBP	2.26	□□□□□ -2.05
HBT1	YDL223C	MSW1	P04803	379 aa		2.26	□□□□□ -2.05
HBT1	YDL223C	SEC4	P07560	215 aa	Known RBP	2.26	□□□□□ -2.05
HBT1	YDL223C	VMA11	P32842	164 aa		2.26	□□□□□ -2.05
HBT1	YDL223C	YBR285W	P38354	144 aa		2.26	□□□□□ -2.05
HBT1	YDL223C	RPS20	P38701	121 aa	Known RBP	2.26	□□□□□ -2.05
HBT1	YDL223C	YER188W	P40103	239 aa		2.26	□□□□□ -2.05
HBT1	YDL223C	ARO8	P53090	500 aa	Known RBP	2.26	□□□□□ -2.05
HBT1	YDL223C	NUP49	Q02199	472 aa		2.26	□□□□□ -2.05
HBT1	YDL223C	AIM36	Q03798	255 aa		2.26	□□□□□ -2.05
HBT1	YDL223C	RRP17	Q04031	235 aa	Predicted RBP	2.26	□□□□□ -2.05
HBT1	YDL223C	SCW10	Q04951	389 aa		2.26	□□□□□ -2.05
HBT1	YDL223C	CSI2	Q08054	341 aa		2.26	□□□□□ -2.05
HBT1	YDL223C	YOL160W	Q08321	113 aa		2.26	□□□□□ -2.05
HBT1	YDL223C	YOR289W	Q12012	251 aa	Predicted RBP	2.26	□□□□□ -2.05
HBT1	YDL223C	MRPL28	P36527	147 aa		2.25	□□□□□ -2.05
HBT1	YDL223C	PRM15	Q03262	622 aa		2.25	□□□□□ -2.05
HBT1	YDL223C	ELP6	Q04868	273 aa		2.25	□□□□□ -2.05
HBT1	YDL223C	MCH1	Q07376	486 aa		2.25	□□□□□ -2.05
HBT1	YDL223C	YCL048W-A	Q2V2Q2	79 aa		2.25	□□□□□ -2.05
HBT1	YDL223C	DSF1	P0CX08	502 aa		2.25	□□□□□ -2.05
HBT1	YDL223C	YNR073C	P0CX09	502 aa		2.25	□□□□□ -2.05
HBT1	YDL223C	FLX1	P40464	311 aa		2.25	□□□□□ -2.05
HBT1	YDL223C	SSU72	P53538	206 aa	Predicted RBP	2.25	□□□□□ -2.05
HBT1	YDL223C	AGC1	Q12482	902 aa		2.25	□□□□□ -2.05
HBT1	YDL223C	COX5B	P00425	151 aa		2.24	□□□□□ -2.05
HBT1	YDL223C	RPL39	P04650	51 aa		2.24	□□□□□ -2.05
HBT1	YDL223C	FAR7	P43592	221 aa		2.24	□□□□□ -2.05
HBT1	YDL223C	YMR315W	Q04869	349 aa	Known RBP	2.24	□□□□□ -2.05
HBT1	YDL223C	BBP1	Q12365	385 aa		2.24	□□□□□ -2.05
HBT1	YDL223C	SRP102	P36057	244 aa	Predicted RBP	2.24	□□□□□ -2.05
HBT1	YDL223C	CTR2	P38865	189 aa		2.24	□□□□□ -2.05
HBT1	YDL223C	YFR045W	P43617	309 aa		2.24	□□□□□ -2.05
HBT1	YDL223C	PIR5	P46999	287 aa		2.24	□□□□□ -2.05
HBT1	YDL223C	RIM9	Q04734	239 aa		2.24	□□□□□ -2.05
HBT1	YDL223C	HIS3	P06633	220 aa		2.24	□□□□□ -2.05
HBT1	YDL223C	SGA1	P08019	549 aa		2.24	□□□□□ -2.05
HBT1	YDL223C	TCA17	P32613	152 aa		2.24	□□□□□ -2.05
HBT1	YDL223C	YER137C	P40083	148 aa	Known RBP	2.24	□□□□□ -2.05
HBT1	YDL223C	PGA1	P53896	198 aa		2.24	□□□□□ -2.05
HBT1	YDL223C	HHT1	P61830	136 aa		2.24	□□□□□ -2.05
HBT1	YDL223C	DIG2	Q03373	323 aa	Known RBP	2.24	□□□□□ -2.05
HBT1	YDL223C	MRX8	Q05473	314 aa		2.24	□□□□□ -2.05
HBT1	YDL223C	RIB3	Q99258	208 aa		2.24	□□□□□ -2.05
HBT1	YDL223C	FBA1	P14540	359 aa	Known RBP	2.23	□□□□□ -2.05
HBT1	YDL223C	ERG24	P32462	438 aa	Known RBP	2.23	□□□□□ -2.05
HBT1	YDL223C	APS1	P35181	156 aa		2.23	□□□□□ -2.05
HBT1	YDL223C	ECM33	P38248	429 aa	Known RBP	2.23	□□□□□ -2.05
HBT1	YDL223C	IRC22	P40006	225 aa		2.23	□□□□□ -2.05
HBT1	YDL223C	HST4	P53688	370 aa		2.23	□□□□□ -2.05
HBT1	YDL223C	NRK1	P53915	240 aa		2.23	□□□□□ -2.05
HBT1	YDL223C	SMT3	Q12306	101 aa	Known RBP	2.23	□□□□□ -2.05
HBT1	YDL223C	MRS1	P07266	363 aa		2.23	□□□□□ -2.05
HBT1	YDL223C	CUP2	P15315	225 aa		2.23	□□□□□ -2.05
HBT1	YDL223C	ARO7	P32178	256 aa		2.23	□□□□□ -2.05
HBT1	YDL223C	YKL102C	P34249	101 aa		2.23	□□□□□ -2.05
HBT1	YDL223C	PRY2	P36110	329 aa		2.23	□□□□□ -2.05
HBT1	YDL223C	DOG1	P38774	246 aa		2.23	□□□□□ -2.05
HBT1	YDL223C	VMA22	P38784	181 aa		2.23	□□□□□ -2.05
HBT1	YDL223C	SMD3	P43321	101 aa	Known RBP	2.23	□□□□□ -2.05
HBT1	YDL223C	AIM25	P47140	327 aa		2.23	□□□□□ -2.05
HBT1	YDL223C	GEP7	P53171	287 aa		2.23	□□□□□ -2.05
HBT1	YDL223C	NQM1	P53228	333 aa	Predicted RBP	2.23	□□□□□ -2.05
HBT1	YDL223C	ALG9	P53868	555 aa	Known RBP	2.23	□□□□□ -2.05
HBT1	YDL223C	APJ1	P53940	528 aa		2.23	□□□□□ -2.05
HBT1	YDL223C	YLR031W	Q07978	186 aa		2.23	□□□□□ -2.05
HBT1	YDL223C	SNF4	P12904	322 aa		2.22	□□□□□ -2.05
HBT1	YDL223C	IPT1	P38954	527 aa		2.22	□□□□□ -2.05
HBT1	YDL223C	TEM1	P38987	245 aa		2.22	□□□□□ -2.05
HBT1	YDL223C	UBC12	P52491	188 aa		2.22	□□□□□ -2.05
HBT1	YDL223C	CAB4	P53332	305 aa		2.22	□□□□□ -2.05
HBT1	YDL223C	NOC4	Q06512	552 aa	Predicted RBP	2.22	□□□□□ -2.05
HBT1	YDL223C	LSO2	Q3E772	92 aa	Known RBP	2.22	□□□□□ -2.05
HBT1	YDL223C	FMP23	P38231	175 aa		2.22	□□□□□ -2.05
HBT1	YDL223C	YNR064C	P53750	290 aa		2.22	□□□□□ -2.05
HBT1	YDL223C	COA4	Q05809	96 aa		2.22	□□□□□ -2.05
HBT1	YDL223C	YOR268C	Q08734	132 aa		2.22	□□□□□ -2.05
HBT1	YDL223C	PRP11	Q07350	266 aa	Predicted RBP	2.22	□□□□□ -2.05
HBT1	YDL223C	RFU1	Q08003	200 aa		2.22	□□□□□ -2.05
HBT1	YDL223C	SEN2	P16658	377 aa		2.21	□□□□□ -2.06
HBT1	YDL223C	UTP30	P36144	274 aa	Known RBP	2.21	□□□□□ -2.06
HBT1	YDL223C	SSH1	P38353	490 aa	Known RBP	2.21	□□□□□ -2.06
HBT1	YDL223C	SNX4	P47057	423 aa		2.21	□□□□□ -2.06
HBT1	YDL223C	YJL016W	P47072	561 aa		2.21	□□□□□ -2.06
HBT1	YDL223C	YGR050C	P53231	118 aa		2.21	□□□□□ -2.06
HBT1	YDL223C	SAY1	P53324	424 aa		2.21	□□□□□ -2.06
HBT1	YDL223C	MED11	Q99278	115 aa		2.21	□□□□□ -2.06
HBT1	YDL223C	KIN28	P06242	306 aa		2.21	□□□□□ -2.06
HBT1	YDL223C	PUT1	P09368	476 aa		2.21	□□□□□ -2.06
HBT1	YDL223C	RNP1	P32385	249 aa		2.21	□□□□□ -2.06
HBT1	YDL223C	RPF1	P38805	295 aa	Known RBP	2.21	□□□□□ -2.06
HBT1	YDL223C	TIR3	P40552	269 aa		2.21	□□□□□ -2.06
HBT1	YDL223C	CCC1	P47818	322 aa		2.21	□□□□□ -2.06

Retrieved 100 of 5,963 RNA–protein pairs in 42.1 ms