RNA–Protein interactions for RNA: YDL122W

UBP1, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP1, Length 2,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP1YDL122W NNT1Q05874 261 aa1.52□□□□□ -2.17
UBP1YDL122W YPS3Q12303 508 aa1.52□□□□□ -2.17
UBP1YDL122W SIR2P06700 562 aa1.52□□□□□ -2.17
UBP1YDL122W CPT1P17898 393 aa1.52□□□□□ -2.17
UBP1YDL122W ASP1P38986 381 aaPredicted RBP1.52□□□□□ -2.17
UBP1YDL122W YGL034CP53186 121 aa1.52□□□□□ -2.17
UBP1YDL122W BOR1P53838 576 aa1.52□□□□□ -2.17
UBP1YDL122W SGF11Q03067 99 aa1.52□□□□□ -2.17
UBP1YDL122W YML108WQ03759 105 aa1.52□□□□□ -2.17
UBP1YDL122W IGO2Q9P305 131 aa1.52□□□□□ -2.17
UBP1YDL122W SMP1P38128 452 aa1.51□□□□□ -2.17
UBP1YDL122W RRT13P40042 185 aa1.51□□□□□ -2.17
UBP1YDL122W PDS1P40316 373 aaPredicted RBP1.51□□□□□ -2.17
UBP1YDL122W CAT5P41735 233 aa1.51□□□□□ -2.17
UBP1YDL122W ERV29P53337 310 aa1.51□□□□□ -2.17
UBP1YDL122W HHT1P61830 136 aa1.51□□□□□ -2.17
UBP1YDL122W LSO2Q3E772 92 aaKnown RBP1.51□□□□□ -2.17
UBP1YDL122W CMD1P06787 147 aaKnown RBP1.51□□□□□ -2.17
UBP1YDL122W MRS1P07266 363 aa1.51□□□□□ -2.17
UBP1YDL122W BUB2P26448 306 aaPredicted RBP1.51□□□□□ -2.17
UBP1YDL122W SYS1P41544 203 aa1.51□□□□□ -2.17
UBP1YDL122W AIM25P47140 327 aa1.51□□□□□ -2.17
UBP1YDL122W PRM8P53174 237 aa1.51□□□□□ -2.17
UBP1YDL122W JAC1P53193 184 aa1.51□□□□□ -2.17
UBP1YDL122W LSM7P53905 115 aaKnown RBP1.51□□□□□ -2.17
UBP1YDL122W ECM19Q06011 112 aa1.51□□□□□ -2.17
UBP1YDL122W YLR179CQ06252 201 aaKnown RBP1.51□□□□□ -2.17
UBP1YDL122W YAL067W-AQ8TGK6 75 aa1.51□□□□□ -2.17
UBP1YDL122W SEC4P07560 215 aaKnown RBP1.5□□□□□ -2.17
UBP1YDL122W RPS1BP23248 255 aaKnown RBP1.5□□□□□ -2.17
UBP1YDL122W UPS2P35200 230 aa1.5□□□□□ -2.17
UBP1YDL122W SRP102P36057 244 aaPredicted RBP1.5□□□□□ -2.17
UBP1YDL122W SWD3P38123 315 aa1.5□□□□□ -2.17
UBP1YDL122W DER1P38307 211 aa1.5□□□□□ -2.17
UBP1YDL122W YER076CP40049 302 aa1.5□□□□□ -2.17
UBP1YDL122W LSM1P47017 172 aaKnown RBP1.5□□□□□ -2.17
UBP1YDL122W YJL028WP47062 111 aa1.5□□□□□ -2.17
UBP1YDL122W TTI2P47168 421 aa1.5□□□□□ -2.17
UBP1YDL122W CAX4P53223 239 aa1.5□□□□□ -2.17
UBP1YDL122W ABF2Q02486 183 aa1.5□□□□□ -2.17
UBP1YDL122W YMR315WQ04869 349 aaKnown RBP1.5□□□□□ -2.17
UBP1YDL122W YLR050CQ12155 161 aaKnown RBP1.5□□□□□ -2.17
UBP1YDL122W ATG5Q12380 294 aa1.5□□□□□ -2.17
UBP1YDL122W YMR230W-AQ3E7B5 62 aa1.5□□□□□ -2.17
UBP1YDL122W RPL25P04456 142 aaKnown RBP1.5□□□□□ -2.17
UBP1YDL122W RPS28BP0C0X0 67 aaKnown RBP1.5□□□□□ -2.17
UBP1YDL122W ETR1P38071 380 aa1.5□□□□□ -2.17
UBP1YDL122W YBL081WP38180 368 aaKnown RBP1.5□□□□□ -2.17
UBP1YDL122W TEM1P38987 245 aa1.5□□□□□ -2.17
UBP1YDL122W YPI1P43587 155 aa1.5□□□□□ -2.17
UBP1YDL122W TVP15Q03860 143 aa1.5□□□□□ -2.17
UBP1YDL122W YOR283WQ12040 230 aaKnown RBP1.5□□□□□ -2.17
UBP1YDL122W TIM22Q12328 207 aa1.5□□□□□ -2.17
UBP1YDL122W YDL085C-AQ3E7B7 68 aaKnown RBP1.5□□□□□ -2.17
UBP1YDL122W RPS28AQ3E7X9 67 aaPredicted RBP1.5□□□□□ -2.17
UBP1YDL122W HTL1Q9URQ5 78 aa1.5□□□□□ -2.17
UBP1YDL122W YEL009C-AA0A023PZF2 135 aa1.49□□□□□ -2.17
UBP1YDL122W CDC8P00572 216 aa1.49□□□□□ -2.17
UBP1YDL122W DPM1P14020 267 aaKnown RBP1.49□□□□□ -2.17
UBP1YDL122W STF2P16965 84 aa1.49□□□□□ -2.17
UBP1YDL122W YKR041WP36134 250 aa1.49□□□□□ -2.17
UBP1YDL122W MRPL27P36526 146 aaPredicted RBP1.49□□□□□ -2.17
UBP1YDL122W DOG2P38773 246 aa1.49□□□□□ -2.17
UBP1YDL122W DOG1P38774 246 aa1.49□□□□□ -2.17
UBP1YDL122W BAT2P47176 376 aaKnown RBP1.49□□□□□ -2.17
UBP1YDL122W YNL184CP53876 108 aa1.49□□□□□ -2.17
UBP1YDL122W NUP49Q02199 472 aa1.49□□□□□ -2.17
UBP1YDL122W YMD8Q03697 442 aa1.49□□□□□ -2.17
UBP1YDL122W UPS1Q05776 175 aa1.49□□□□□ -2.17
UBP1YDL122W YOL160WQ08321 113 aa1.49□□□□□ -2.17
UBP1YDL122W PET20Q99373 253 aa1.49□□□□□ -2.17
UBP1YDL122W YHR139C-AO13536 103 aa1.49□□□□□ -2.17
UBP1YDL122W COX5BP00425 151 aa1.49□□□□□ -2.17
UBP1YDL122W SEC22P22214 214 aa1.49□□□□□ -2.17
UBP1YDL122W MPC1P53157 130 aaKnown RBP1.49□□□□□ -2.17
UBP1YDL122W DID2P69771 204 aa1.49□□□□□ -2.17
UBP1YDL122W MRPS16Q02608 121 aa1.49□□□□□ -2.17
UBP1YDL122W DML1Q03652 475 aa1.49□□□□□ -2.17
UBP1YDL122W AIM36Q03798 255 aa1.49□□□□□ -2.17
UBP1YDL122W YDR114CQ04597 100 aa1.49□□□□□ -2.17
UBP1YDL122W YPL264CQ08980 353 aa1.49□□□□□ -2.17
UBP1YDL122W YLR053CQ12026 108 aa1.49□□□□□ -2.17
UBP1YDL122W NSL1Q12143 216 aa1.49□□□□□ -2.17
UBP1YDL122W SMT3Q12306 101 aaKnown RBP1.49□□□□□ -2.17
UBP1YDL122W YBL112CQ3E7Y4 105 aa1.49□□□□□ -2.17
UBP1YDL122W ERG24P32462 438 aaKnown RBP1.48□□□□□ -2.17
UBP1YDL122W CPR5P35176 225 aa1.48□□□□□ -2.17
UBP1YDL122W UBC12P52491 188 aa1.48□□□□□ -2.17
UBP1YDL122W YKR005CQ02203 525 aa1.48□□□□□ -2.17
UBP1YDL122W SPC2Q04969 178 aa1.48□□□□□ -2.17
UBP1YDL122W HRT1Q08273 121 aa1.48□□□□□ -2.17
UBP1YDL122W VAM10Q08474 114 aa1.48□□□□□ -2.17
UBP1YDL122W YPL257WQ08974 193 aa1.48□□□□□ -2.17
UBP1YDL122W FCY1Q12178 158 aa1.48□□□□□ -2.17
UBP1YDL122W RIO1Q12196 484 aaKnown RBP1.48□□□□□ -2.17
UBP1YDL122W YOR020W-AQ3E824 90 aa1.48□□□□□ -2.17
UBP1YDL122W ISD11Q6Q560 94 aa1.48□□□□□ -2.17
UBP1YDL122W CDC7P06243 507 aa1.48□□□□□ -2.17
UBP1YDL122W SNF4P12904 322 aa1.48□□□□□ -2.17
UBP1YDL122W COX10P21592 462 aa1.48□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 48.9 ms