RNA–Protein interactions for RNA: YDL020C

RPN4, Transcript of Transcription factor that stimulates expression of proteasome genes, yeastyeast

Gene RPN4, Length 1,596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN4YDL020C RGI1P40043 161 aaPredicted RBP2.23□□□□□ -2.05
RPN4YDL020C AYR1P40471 297 aa2.23□□□□□ -2.05
RPN4YDL020C TIR3P40552 269 aa2.23□□□□□ -2.05
RPN4YDL020C APS3P47064 194 aa2.23□□□□□ -2.05
RPN4YDL020C BOL2P53082 120 aa2.23□□□□□ -2.05
RPN4YDL020C GRX5Q02784 150 aa2.23□□□□□ -2.05
RPN4YDL020C MAK3Q03503 176 aa2.23□□□□□ -2.05
RPN4YDL020C YDR249CQ03787 373 aa2.23□□□□□ -2.05
RPN4YDL020C YMR321CQ04898 105 aa2.23□□□□□ -2.05
RPN4YDL020C YOL160WQ08321 113 aa2.23□□□□□ -2.05
RPN4YDL020C YFR032C-BQ8TGU2 87 aa2.23□□□□□ -2.05
RPN4YDL020C RPL27AP0C2H6 136 aaKnown RBP2.23□□□□□ -2.05
RPN4YDL020C RPL27BP0C2H7 136 aaKnown RBP2.23□□□□□ -2.05
RPN4YDL020C DDI2P0CH63 225 aa2.23□□□□□ -2.05
RPN4YDL020C DDI3P0CH64 225 aa2.23□□□□□ -2.05
RPN4YDL020C YPK2P18961 677 aa2.23□□□□□ -2.05
RPN4YDL020C MAG1P22134 296 aaKnown RBP2.23□□□□□ -2.05
RPN4YDL020C YEL028WP39989 153 aa2.23□□□□□ -2.05
RPN4YDL020C SOK1P40317 901 aa2.23□□□□□ -2.05
RPN4YDL020C MPM1P40364 252 aa2.23□□□□□ -2.05
RPN4YDL020C AIM25P47140 327 aa2.23□□□□□ -2.05
RPN4YDL020C SWC7Q06707 132 aa2.23□□□□□ -2.05
RPN4YDL020C YHR213W-AQ8TGT4 77 aa2.23□□□□□ -2.05
RPN4YDL020C ECM29P38737 1868 aa2.22□□□□□ -2.05
RPN4YDL020C URA5P13298 226 aaKnown RBP2.22□□□□□ -2.05
RPN4YDL020C BET1P22804 142 aa2.22□□□□□ -2.05
RPN4YDL020C PEX34P25584 144 aa2.22□□□□□ -2.05
RPN4YDL020C TAH1P25638 111 aaPredicted RBP2.22□□□□□ -2.05
RPN4YDL020C HYM1P32464 399 aa2.22□□□□□ -2.05
RPN4YDL020C ECM31P38122 312 aa2.22□□□□□ -2.05
RPN4YDL020C UMP1P38293 148 aa2.22□□□□□ -2.05
RPN4YDL020C SVP26P38869 228 aa2.22□□□□□ -2.05
RPN4YDL020C EDC3P39998 551 aaKnown RBP2.22□□□□□ -2.05
RPN4YDL020C AGE2P40529 298 aa2.22□□□□□ -2.05
RPN4YDL020C YJL218WP40892 196 aaKnown RBP2.22□□□□□ -2.05
RPN4YDL020C UBC12P52491 188 aa2.22□□□□□ -2.05
RPN4YDL020C DOC1P53068 250 aa2.22□□□□□ -2.05
RPN4YDL020C MMS2P53152 137 aa2.22□□□□□ -2.05
RPN4YDL020C AIM36Q03798 255 aa2.22□□□□□ -2.05
RPN4YDL020C ATP14Q12349 124 aa2.22□□□□□ -2.05
RPN4YDL020C SUS1Q6WNK7 96 aa2.22□□□□□ -2.05
RPN4YDL020C IDP1P21954 428 aaKnown RBP2.21□□□□□ -2.06
RPN4YDL020C CNB1P25296 175 aa2.21□□□□□ -2.06
RPN4YDL020C YCR099CP25657 155 aa2.21□□□□□ -2.06
RPN4YDL020C DSE2P38844 325 aa2.21□□□□□ -2.06
RPN4YDL020C LSM1P47017 172 aaKnown RBP2.21□□□□□ -2.06
RPN4YDL020C EAF6P47128 113 aa2.21□□□□□ -2.06
RPN4YDL020C MPC1P53157 130 aaKnown RBP2.21□□□□□ -2.06
RPN4YDL020C YOL131WQ08270 108 aa2.21□□□□□ -2.06
RPN4YDL020C PET54P10834 293 aa2.2□□□□□ -2.06
RPN4YDL020C RPB3P16370 318 aaKnown RBP2.2□□□□□ -2.06
RPN4YDL020C NVJ1P38881 321 aa2.2□□□□□ -2.06
RPN4YDL020C ERG10P41338 398 aaKnown RBP2.2□□□□□ -2.06
RPN4YDL020C YAE1P47118 141 aaPredicted RBP2.2□□□□□ -2.06
RPN4YDL020C TIM13P53299 105 aa2.2□□□□□ -2.06
RPN4YDL020C LDB18Q07887 179 aa2.2□□□□□ -2.06
RPN4YDL020C SPS2P08459 502 aa2.19□□□□□ -2.06
RPN4YDL020C MDH2P22133 377 aa2.19□□□□□ -2.06
RPN4YDL020C SNC2P33328 115 aa2.19□□□□□ -2.06
RPN4YDL020C VTC1P40046 129 aaRIP-Chip data2.19□□□□□ -2.06not detected
RPN4YDL020C YNL217WP40152 326 aa2.19□□□□□ -2.06
RPN4YDL020C PHB1P40961 287 aa2.19□□□□□ -2.06
RPN4YDL020C YGL041W-AP0C5N3 154 aa2.19□□□□□ -2.06
RPN4YDL020C CKS1P20486 150 aaKnown RBP2.19□□□□□ -2.06
RPN4YDL020C RPS12P48589 143 aaKnown RBP2.19□□□□□ -2.06
RPN4YDL020C YNR077CP53758 84 aa2.19□□□□□ -2.06
RPN4YDL020C YOR289WQ12012 251 aaPredicted RBP2.19□□□□□ -2.06
RPN4YDL020C SIR2P06700 562 aa2.18□□□□□ -2.06
RPN4YDL020C MRS1P07266 363 aa2.18□□□□□ -2.06
RPN4YDL020C APA2P22108 325 aa2.18□□□□□ -2.06
RPN4YDL020C VPS51P36116 164 aa2.18□□□□□ -2.06
RPN4YDL020C HPA3P39979 161 aa2.18□□□□□ -2.06
RPN4YDL020C LSM4P40070 187 aaKnown RBP2.18□□□□□ -2.06
RPN4YDL020C HHO1P53551 258 aa2.18□□□□□ -2.06
RPN4YDL020C MET31Q03081 177 aa2.18□□□□□ -2.06
RPN4YDL020C YGL194C-AQ2V2P6 80 aa2.18□□□□□ -2.06
RPN4YDL020C UBR1P19812 1950 aa2.17□□□□□ -2.06
RPN4YDL020C ATP15P21306 62 aa2.17□□□□□ -2.06
RPN4YDL020C RPS1BP23248 255 aaKnown RBP2.17□□□□□ -2.06
RPN4YDL020C NSG1P38837 291 aa2.17□□□□□ -2.06
RPN4YDL020C SWM2P40342 146 aa2.17□□□□□ -2.06
RPN4YDL020C YGR201CP42936 225 aa2.17□□□□□ -2.06
RPN4YDL020C LSM8P47093 109 aaKnown RBP2.17□□□□□ -2.06
RPN4YDL020C JAC1P53193 184 aa2.17□□□□□ -2.06
RPN4YDL020C YDR274CP87283 123 aa2.17□□□□□ -2.06
RPN4YDL020C GIM5Q04493 163 aa2.17□□□□□ -2.06
RPN4YDL020C FSF1Q12029 327 aaKnown RBP2.17□□□□□ -2.06
RPN4YDL020C CMC2Q3E7A4 109 aa2.17□□□□□ -2.06
RPN4YDL020C AHC2P25649 128 aa2.16□□□□□ -2.06
RPN4YDL020C ADE1P27616 306 aa2.16□□□□□ -2.06
RPN4YDL020C SRB6P32570 121 aa2.16□□□□□ -2.06
RPN4YDL020C FZF1P32805 299 aa2.16□□□□□ -2.06
RPN4YDL020C TMA19P35691 167 aaKnown RBP2.16□□□□□ -2.06
RPN4YDL020C GTT1P40582 234 aa2.16□□□□□ -2.06
RPN4YDL020C GLR1P41921 483 aaKnown RBP2.16□□□□□ -2.06
RPN4YDL020C BAT2P47176 376 aaKnown RBP2.16□□□□□ -2.06
RPN4YDL020C ELP6Q04868 273 aa2.16□□□□□ -2.06
RPN4YDL020C ATG41Q12048 136 aa2.16□□□□□ -2.06
RPN4YDL020C DGK1Q12382 290 aa2.16□□□□□ -2.06
RPN4YDL020C LHP1P33399 275 aaKnown RBP2.15□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 66.1 ms