RNA–Protein interactions for RNA: YCR049C

YCR049C, Transcript of Dubious open reading frame, yeast

Gene YCR049C, Length 447 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCR049C	YCR049C	RPL14A	P36105	138 aa	Known RBP	5.72	□□□□□ -1.49
YCR049C	YCR049C	YCR041W	P37265	110 aa		5.72	□□□□□ -1.49
YCR049C	YCR049C	RIB5	P38145	238 aa		5.72	□□□□□ -1.49
YCR049C	YCR049C	RPL14B	P38754	138 aa	Known RBP	5.72	□□□□□ -1.49
YCR049C	YCR049C	POG1	P40473	351 aa		5.72	□□□□□ -1.49
YCR049C	YCR049C	HHO1	P53551	258 aa		5.72	□□□□□ -1.49
YCR049C	YCR049C	CAF40	P53829	373 aa		5.72	□□□□□ -1.49
YCR049C	YCR049C	DYN2	Q02647	92 aa		5.72	□□□□□ -1.49
YCR049C	YCR049C	YPR145C-A	Q2V2P0	78 aa		5.72	□□□□□ -1.49
YCR049C	YCR049C	YGL258W-A	Q3E740	77 aa		5.72	□□□□□ -1.49
YCR049C	YCR049C	RPS25B	P0C0T4	108 aa	Known RBP	5.71	□□□□□ -1.5
YCR049C	YCR049C	ATP3	P38077	311 aa	Known RBP	5.71	□□□□□ -1.5
YCR049C	YCR049C	SMD3	P43321	101 aa	Known RBP	5.71	□□□□□ -1.5
YCR049C	YCR049C	FRQ1	Q06389	190 aa		5.71	□□□□□ -1.5
YCR049C	YCR049C	PML1	Q07930	204 aa	Predicted RBP	5.71	□□□□□ -1.5
YCR049C	YCR049C	GEP3	Q08622	556 aa		5.71	□□□□□ -1.5
YCR049C	YCR049C	RPS25A	Q3E792	108 aa	Predicted RBP	5.71	□□□□□ -1.5
YCR049C	YCR049C	MRS3	P10566	314 aa		5.7	□□□□□ -1.5
YCR049C	YCR049C	APA2	P22108	325 aa		5.7	□□□□□ -1.5
YCR049C	YCR049C	YCR043C	P25361	127 aa		5.7	□□□□□ -1.5
YCR049C	YCR049C	YBL059W	P34224	193 aa		5.7	□□□□□ -1.5
YCR049C	YCR049C	GPI18	P38211	433 aa		5.7	□□□□□ -1.5
YCR049C	YCR049C	HAM1	P47119	197 aa	Known RBP	5.7	□□□□□ -1.5
YCR049C	YCR049C	YNR064C	P53750	290 aa		5.7	□□□□□ -1.5
YCR049C	YCR049C	AVO2	Q04749	426 aa		5.7	□□□□□ -1.5
YCR049C	YCR049C	RAX2	Q12465	1220 aa		5.7	□□□□□ -1.5
YCR049C	YCR049C	URA2	P07259	2214 aa	Known RBP	5.69	□□□□□ -1.5
YCR049C	YCR049C	NOP1	P15646	327 aa	Known RBP	5.69	□□□□□ -1.5
YCR049C	YCR049C	QCR9	P22289	66 aa		5.69	□□□□□ -1.5
YCR049C	YCR049C	IES6	P32617	166 aa		5.69	□□□□□ -1.5
YCR049C	YCR049C	SHB17	P36136	271 aa	Known RBP	5.69	□□□□□ -1.5
YCR049C	YCR049C	SBH2	P52871	88 aa		5.69	□□□□□ -1.5
YCR049C	YCR049C	PAU4	P53427	120 aa		5.69	□□□□□ -1.5
YCR049C	YCR049C	MIX17	Q03667	156 aa		5.69	□□□□□ -1.5
YCR049C	YCR049C	YMR007W	Q03675	126 aa		5.69	□□□□□ -1.5
YCR049C	YCR049C	TMC1	Q08422	150 aa	Predicted RBP	5.69	□□□□□ -1.5
YCR049C	YCR049C	NTF2	P33331	125 aa	Known RBP	5.68	□□□□□ -1.5
YCR049C	YCR049C	PMU1	P36069	295 aa		5.68	□□□□□ -1.5
YCR049C	YCR049C	ATG8	P38182	117 aa	RIP-Chip data	5.68	□□□□□ -1.5	not detected
YCR049C	YCR049C	NSA2	P40078	261 aa	Known RBP	5.68	□□□□□ -1.5
YCR049C	YCR049C	NCA3	P46955	337 aa		5.68	□□□□□ -1.5
YCR049C	YCR049C	BNS1	P50084	137 aa		5.68	□□□□□ -1.5
YCR049C	YCR049C	RIB4	P50861	169 aa	Predicted RBP	5.68	□□□□□ -1.5
YCR049C	YCR049C	YGL114W	P53134	725 aa		5.68	□□□□□ -1.5
YCR049C	YCR049C	STD1	Q02794	444 aa		5.68	□□□□□ -1.5
YCR049C	YCR049C	CTR3	Q06686	241 aa		5.68	□□□□□ -1.5
YCR049C	YCR049C	SRL1	Q08673	210 aa		5.68	□□□□□ -1.5
YCR049C	YCR049C	ERV2	Q12284	196 aa		5.68	□□□□□ -1.5
YCR049C	YCR049C	SME1	Q12330	94 aa	Predicted RBP	5.68	□□□□□ -1.5
YCR049C	YCR049C	ILV5	P06168	395 aa	Known RBP	5.67	□□□□□ -1.5
YCR049C	YCR049C	PAU1	P0CE88	120 aa		5.67	□□□□□ -1.5
YCR049C	YCR049C	PAU14	P0CE89	120 aa		5.67	□□□□□ -1.5
YCR049C	YCR049C	PAU6	P0CE90	120 aa		5.67	□□□□□ -1.5
YCR049C	YCR049C	PAU18	P0CE91	120 aa		5.67	□□□□□ -1.5
YCR049C	YCR049C	PAU8	P0CE92	120 aa		5.67	□□□□□ -1.5
YCR049C	YCR049C	PAU11	P0CE93	120 aa		5.67	□□□□□ -1.5
YCR049C	YCR049C	YCR022C	P25620	114 aa		5.67	□□□□□ -1.5
YCR049C	YCR049C	YKR045C	P36138	183 aa		5.67	□□□□□ -1.5
YCR049C	YCR049C	QDR3	P38227	689 aa		5.67	□□□□□ -1.5
YCR049C	YCR049C	PAU13	P38725	120 aa		5.67	□□□□□ -1.5
YCR049C	YCR049C	RTC3	P38804	111 aa	Predicted RBP	5.67	□□□□□ -1.5
YCR049C	YCR049C	PET100	P38958	111 aa		5.67	□□□□□ -1.5
YCR049C	YCR049C	PGD1	P40356	397 aa		5.67	□□□□□ -1.5
YCR049C	YCR049C	YIL012W	P40551	113 aa		5.67	□□□□□ -1.5
YCR049C	YCR049C	PHS1	P40857	217 aa		5.67	□□□□□ -1.5
YCR049C	YCR049C	YJR015W	P47090	510 aa		5.67	□□□□□ -1.5
YCR049C	YCR049C	TIM21	P53220	239 aa		5.67	□□□□□ -1.5
YCR049C	YCR049C	BOR1	P53838	576 aa		5.67	□□□□□ -1.5
YCR049C	YCR049C	PAU10	Q03050	120 aa		5.67	□□□□□ -1.5
YCR049C	YCR049C	PAU20	Q08322	120 aa		5.67	□□□□□ -1.5
YCR049C	YCR049C	ATO3	Q12359	275 aa		5.67	□□□□□ -1.5
YCR049C	YCR049C	PAU9	Q3E770	120 aa		5.67	□□□□□ -1.5
YCR049C	YCR049C	SOD1	P00445	154 aa	Known RBP	5.66	□□□□□ -1.5
YCR049C	YCR049C	STF1	P01098	86 aa		5.66	□□□□□ -1.5
YCR049C	YCR049C	HTB1	P02293	131 aa	Known RBP	5.66	□□□□□ -1.5
YCR049C	YCR049C	YIR020C	P40575	100 aa		5.66	□□□□□ -1.5
YCR049C	YCR049C	YJL213W	P40896	331 aa		5.66	□□□□□ -1.5
YCR049C	YCR049C	VMA21	P41806	77 aa		5.66	□□□□□ -1.5
YCR049C	YCR049C	DAN1	P47178	298 aa		5.66	□□□□□ -1.5
YCR049C	YCR049C	YHP1	Q04116	353 aa		5.66	□□□□□ -1.5
YCR049C	YCR049C	ARR2	Q06597	130 aa		5.66	□□□□□ -1.5
YCR049C	YCR049C	IRC25	Q07951	179 aa		5.66	□□□□□ -1.5
YCR049C	YCR049C	ATP16	Q12165	160 aa		5.66	□□□□□ -1.5
YCR049C	YCR049C	YMR316C-A	I2HB70	103 aa		5.65	□□□□□ -1.5
YCR049C	YCR049C	ADH3	P07246	375 aa	Known RBP	5.65	□□□□□ -1.5
YCR049C	YCR049C	TOM40	P23644	387 aa	Known RBP	5.65	□□□□□ -1.5
YCR049C	YCR049C	ALK2	P32789	676 aa	Predicted RBP	5.65	□□□□□ -1.5
YCR049C	YCR049C	DER1	P38307	211 aa		5.65	□□□□□ -1.5
YCR049C	YCR049C	NSE4	P43124	402 aa		5.65	□□□□□ -1.5
YCR049C	YCR049C	LOC1	P43586	204 aa	Predicted RBP	5.65	□□□□□ -1.5
YCR049C	YCR049C	YGR026W	P53217	278 aa		5.65	□□□□□ -1.5
YCR049C	YCR049C	SSU72	P53538	206 aa	Predicted RBP	5.65	□□□□□ -1.5
YCR049C	YCR049C	SHH3	Q04487	196 aa		5.65	□□□□□ -1.5
YCR049C	YCR049C	ADH6	Q04894	360 aa	Known RBP	5.65	□□□□□ -1.5
YCR049C	YCR049C	YOR097C	Q12274	175 aa	Predicted RBP	5.65	□□□□□ -1.5
YCR049C	YCR049C	SEC59	P20048	519 aa		5.64	□□□□□ -1.51
YCR049C	YCR049C	SDH4	P37298	181 aa		5.64	□□□□□ -1.51
YCR049C	YCR049C	LST8	P41318	303 aa		5.64	□□□□□ -1.51
YCR049C	YCR049C	MIC27	P50945	234 aa		5.64	□□□□□ -1.51
YCR049C	YCR049C	BET5	Q03630	159 aa		5.64	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 52.7 ms