RNA–Protein interactions for RNA: snR47

snR47, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR47, Length 99 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR47snR47 SSK22P25390 1331 aaPredicted RBP-2.45□□□□□ -2.8
snR47snR47 RME1P32338 300 aaKnown RBP-2.46□□□□□ -2.8
snR47snR47 ECM31P38122 312 aa-2.46□□□□□ -2.8
snR47snR47 PET100P38958 111 aa-2.46□□□□□ -2.8
snR47snR47 YER134CP40081 178 aa-2.46□□□□□ -2.8
snR47snR47 RFC4P40339 323 aaKnown RBP-2.46□□□□□ -2.8
snR47snR47 YCR090CP25654 182 aaKnown RBP-2.47□□□□□ -2.8
snR47snR47 IPI1P38803 334 aaPredicted RBP-2.47□□□□□ -2.8
snR47snR47 SPC25P40014 221 aa-2.47□□□□□ -2.8
snR47snR47 PNC1P53184 216 aaKnown RBP-2.47□□□□□ -2.8
snR47snR47 MGR3Q04472 501 aa-2.47□□□□□ -2.8
snR47snR47 IRC21Q04772 201 aa-2.47□□□□□ -2.8
snR47snR47 ATG31Q12421 196 aa-2.47□□□□□ -2.8
snR47snR47 SEC16P48415 2195 aaKnown RBP-2.47□□□□□ -2.81
snR47snR47 MRP1P10662 321 aaKnown RBP-2.48□□□□□ -2.81
snR47snR47 MTW1P39731 289 aa-2.48□□□□□ -2.81
snR47snR47 YGR269WP40326 108 aa-2.48□□□□□ -2.81
snR47snR47 ERG10P41338 398 aaKnown RBP-2.48□□□□□ -2.81
snR47snR47 BRX1Q08235 291 aaKnown RBP-2.48□□□□□ -2.81
snR47snR47 SPT3P06844 337 aa-2.49□□□□□ -2.81
snR47snR47 BCY1P07278 416 aaKnown RBP-2.49□□□□□ -2.81
snR47snR47 SEC4P07560 215 aaKnown RBP-2.49□□□□□ -2.81
snR47snR47 BMH2P34730 273 aaKnown RBP-2.49□□□□□ -2.81
snR47snR47 YRA2P36036 203 aaKnown RBP RIP-Chip data-2.49□□□□□ -2.81not detected
snR47snR47 YEA6P39953 335 aa-2.49□□□□□ -2.81
snR47snR47 TRM9P49957 279 aa-2.49□□□□□ -2.81
snR47snR47 COG5P53951 403 aa-2.49□□□□□ -2.81
snR47snR47 DAS2Q12084 232 aa-2.49□□□□□ -2.81
snR47snR47 REX3Q12090 404 aa-2.49□□□□□ -2.81
snR47snR47 GIS3Q12418 502 aa-2.49□□□□□ -2.81
snR47snR47 RDI1Q12434 202 aa-2.49□□□□□ -2.81
snR47snR47 MAG1P22134 296 aaKnown RBP-2.5□□□□□ -2.81
snR47snR47 RPA12P32529 125 aaKnown RBP-2.5□□□□□ -2.81
snR47snR47 EMC4P53073 190 aa-2.5□□□□□ -2.81
snR47snR47 CDC28P00546 298 aaKnown RBP-2.51□□□□□ -2.81
snR47snR47 RPL25P04456 142 aaKnown RBP-2.51□□□□□ -2.81
snR47snR47 YJR128WP47162 119 aa-2.51□□□□□ -2.81
snR47snR47 RPL33AP05744 107 aaKnown RBP-2.52□□□□□ -2.81
snR47snR47 RPS25BP0C0T4 108 aaKnown RBP-2.52□□□□□ -2.81
snR47snR47 HYP2P23301 157 aaKnown RBP-2.52□□□□□ -2.81
snR47snR47 NTF2P33331 125 aaKnown RBP-2.52□□□□□ -2.81
snR47snR47 GEP7P53171 287 aa-2.52□□□□□ -2.81
snR47snR47 RPS25AQ3E792 108 aaPredicted RBP-2.52□□□□□ -2.81
snR47snR47 URA6P15700 204 aa-2.53□□□□□ -2.81
snR47snR47 SKI6P46948 246 aaPredicted RBP-2.53□□□□□ -2.81
snR47snR47 YDL157CQ12082 118 aa-2.53□□□□□ -2.81
snR47snR47 YOR381W-AQ3E804 55 aa-2.53□□□□□ -2.81
snR47snR47 YHR214C-EQ8TGK0 99 aa-2.53□□□□□ -2.81
snR47snR47 NTG1P31378 399 aa-2.54□□□□□ -2.82
snR47snR47 SPT14P32363 452 aa-2.54□□□□□ -2.82
snR47snR47 HOC1P47124 396 aa-2.54□□□□□ -2.82
snR47snR47 DIE2P50076 525 aa-2.54□□□□□ -2.82
snR47snR47 SDO1Q07953 250 aaKnown RBP-2.54□□□□□ -2.82
snR47snR47 TY1B-HO13535 1793 aa-2.54□□□□□ -2.82
snR47snR47 UBR1P19812 1950 aa-2.54□□□□□ -2.82
snR47snR47 RRT1P38192 103 aa-2.55□□□□□ -2.82
snR47snR47 COX20Q04935 205 aa-2.55□□□□□ -2.82
snR47snR47 ATP20Q12233 115 aa-2.55□□□□□ -2.82
snR47snR47 CMC4Q3E7A9 73 aa-2.55□□□□□ -2.82
snR47snR47 RSF2P46974 1380 aa-2.56□□□□□ -2.82
snR47snR47 POL30P15873 258 aaKnown RBP-2.56□□□□□ -2.82
snR47snR47 YBR013CP38215 129 aa-2.56□□□□□ -2.82
snR47snR47 GRX5Q02784 150 aa-2.57□□□□□ -2.82
snR47snR47 RIM9Q04734 239 aa-2.57□□□□□ -2.82
snR47snR47 KAP95Q06142 861 aaKnown RBP-2.57□□□□□ -2.82
snR47snR47 YPR127WQ06494 345 aa-2.57□□□□□ -2.82
snR47snR47 YOL014WQ08110 124 aa-2.57□□□□□ -2.82
snR47snR47 AIM2P39721 246 aa-2.58□□□□□ -2.82
snR47snR47 YEL014CP39999 101 aa-2.58□□□□□ -2.82
snR47snR47 LIA1P47120 325 aaKnown RBP-2.58□□□□□ -2.82
snR47snR47 ARL3Q02804 198 aa-2.58□□□□□ -2.82
snR47snR47 HMF1P40037 129 aaKnown RBP-2.59□□□□□ -2.82
snR47snR47 MIC27P50945 234 aa-2.59□□□□□ -2.82
snR47snR47 BRR6P53062 197 aa-2.59□□□□□ -2.82
snR47snR47 LSM7P53905 115 aaKnown RBP-2.59□□□□□ -2.82
snR47snR47 GAL83Q04739 417 aa-2.59□□□□□ -2.82
snR47snR47 TY4B-JP47024 1803 aa-2.6□□□□□ -2.83
snR47snR47 GCY1P14065 312 aaKnown RBP RIP-Chip data-2.6□□□□□ -2.83not detected
snR47snR47 CNB1P25296 175 aa-2.6□□□□□ -2.83
snR47snR47 YCR016WP25617 290 aaKnown RBP-2.6□□□□□ -2.83
snR47snR47 HSP150P32478 413 aa-2.6□□□□□ -2.83
snR47snR47 TAF14P35189 244 aa-2.6□□□□□ -2.83
snR47snR47 MIC12P38341 106 aa-2.6□□□□□ -2.83
snR47snR47 CUE1P38428 203 aa-2.6□□□□□ -2.83
snR47snR47 NSA2P40078 261 aaKnown RBP-2.6□□□□□ -2.83
snR47snR47 MRPS12P53732 153 aa-2.6□□□□□ -2.83
snR47snR47 PGC1Q08959 321 aa-2.6□□□□□ -2.83
snR47snR47 YRF1-3P0CX14 1859 aa-2.6□□□□□ -2.83
snR47snR47 YRF1-7P0CX15 1859 aa-2.6□□□□□ -2.83
snR47snR47 YHR173CP38864 112 aa-2.61□□□□□ -2.83
snR47snR47 YFL019CP43576 117 aa-2.61□□□□□ -2.83
snR47snR47 VPS55P47111 140 aa-2.61□□□□□ -2.83
snR47snR47 PAC10P48363 199 aa-2.61□□□□□ -2.83
snR47snR47 FYV6P53913 173 aa-2.61□□□□□ -2.83
snR47snR47 YML079WQ03629 201 aa-2.61□□□□□ -2.83
snR47snR47 YML100W-AQ8TGT0 57 aa-2.61□□□□□ -2.83
snR47snR47 RCF1Q03713 159 aa-2.62□□□□□ -2.83
snR47snR47 YMR315WQ04869 349 aaKnown RBP-2.62□□□□□ -2.83
snR47snR47 SPS2P08459 502 aa-2.63□□□□□ -2.83
snR47snR47 RUD3Q12234 484 aaKnown RBP-2.63□□□□□ -2.83
Retrieved 100 of 5,963 RNA–protein pairs in 86.1 ms