RNA–Protein interactions for RNA: snR38

snR38, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR38, Length 95 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR38snR38 YDL157CQ12082 118 aa-2.27□□□□□ -2.77
snR38snR38 GCD2P12754 651 aaPredicted RBP-2.28□□□□□ -2.77
snR38snR38 MTW1P39731 289 aa-2.28□□□□□ -2.77
snR38snR38 MRPS12P53732 153 aa-2.28□□□□□ -2.77
snR38snR38 YNG1Q08465 219 aa-2.28□□□□□ -2.77
snR38snR38 MED4Q12343 284 aa-2.28□□□□□ -2.77
snR38snR38 RIB3Q99258 208 aa-2.28□□□□□ -2.77
snR38snR38 GCY1P14065 312 aaKnown RBP RIP-Chip data-2.29□□□□□ -2.78not detected
snR38snR38 TCA17P32613 152 aa-2.29□□□□□ -2.78
snR38snR38 AIM2P39721 246 aa-2.29□□□□□ -2.78
snR38snR38 YJR128WP47162 119 aa-2.29□□□□□ -2.78
snR38snR38 SPO19Q03029 223 aa-2.29□□□□□ -2.78
snR38snR38 RDI1Q12434 202 aa-2.29□□□□□ -2.78
snR38snR38 RPL33AP05744 107 aaKnown RBP-2.3□□□□□ -2.78
snR38snR38 RPS25BP0C0T4 108 aaKnown RBP-2.3□□□□□ -2.78
snR38snR38 TIR1P10863 254 aa-2.3□□□□□ -2.78
snR38snR38 MGT1P26188 188 aa-2.3□□□□□ -2.78
snR38snR38 NTG1P31378 399 aa-2.3□□□□□ -2.78
snR38snR38 RME1P32338 300 aaKnown RBP-2.3□□□□□ -2.78
snR38snR38 YRA2P36036 203 aaKnown RBP RIP-Chip data-2.3□□□□□ -2.78not detected
snR38snR38 RFC4P40339 323 aaKnown RBP-2.3□□□□□ -2.78
snR38snR38 FAR7P43592 221 aa-2.3□□□□□ -2.78
snR38snR38 FMP33P46998 180 aa-2.3□□□□□ -2.78
snR38snR38 YJR149WP47177 404 aa-2.3□□□□□ -2.78
snR38snR38 EMC4P53073 190 aa-2.3□□□□□ -2.78
snR38snR38 CSM4Q08955 156 aa-2.3□□□□□ -2.78
snR38snR38 RPS25AQ3E792 108 aaPredicted RBP-2.3□□□□□ -2.78
snR38snR38 YPR117WQ06116 2489 aa-2.3□□□□□ -2.78
snR38snR38 SEN1Q00416 2231 aaKnown RBP-2.3□□□□□ -2.78
snR38snR38 SPC25P40014 221 aa-2.31□□□□□ -2.78
snR38snR38 LOC1P43586 204 aaPredicted RBP-2.31□□□□□ -2.78
snR38snR38 ERV41Q04651 352 aa-2.31□□□□□ -2.78
snR38snR38 YRF1-3P0CX14 1859 aa-2.32□□□□□ -2.78
snR38snR38 YRF1-7P0CX15 1859 aa-2.32□□□□□ -2.78
snR38snR38 MAG1P22134 296 aaKnown RBP-2.32□□□□□ -2.78
snR38snR38 SUA7P29055 345 aaPredicted RBP-2.32□□□□□ -2.78
snR38snR38 BMH2P34730 273 aaKnown RBP-2.32□□□□□ -2.78
snR38snR38 GLC8P41818 229 aa-2.32□□□□□ -2.78
snR38snR38 KAP95Q06142 861 aaKnown RBP-2.32□□□□□ -2.78
snR38snR38 TY1B-HO13535 1793 aa-2.32□□□□□ -2.78
snR38snR38 YGR050CP53231 118 aa-2.33□□□□□ -2.78
snR38snR38 TY4B-JP47024 1803 aa-2.33□□□□□ -2.78
snR38snR38 SRL3P36167 246 aa-2.34□□□□□ -2.78
snR38snR38 SAC3P46674 1301 aa-2.35□□□□□ -2.79
snR38snR38 PEX34P25584 144 aa-2.35□□□□□ -2.79
snR38snR38 YEL014CP39999 101 aa-2.35□□□□□ -2.79
snR38snR38 ARL3Q02804 198 aa-2.35□□□□□ -2.79
snR38snR38 YML079WQ03629 201 aa-2.35□□□□□ -2.79
snR38snR38 GAL83Q04739 417 aa-2.35□□□□□ -2.79
snR38snR38 DAS2Q12084 232 aa-2.35□□□□□ -2.79
snR38snR38 FMP16Q12497 93 aa-2.35□□□□□ -2.79
snR38snR38 RPL25P04456 142 aaKnown RBP-2.36□□□□□ -2.79
snR38snR38 BCY1P07278 416 aaKnown RBP-2.36□□□□□ -2.79
snR38snR38 SPT14P32363 452 aa-2.36□□□□□ -2.79
snR38snR38 NAS2P40555 220 aa-2.36□□□□□ -2.79
snR38snR38 TRM9P49957 279 aa-2.36□□□□□ -2.79
snR38snR38 NRK1P53915 240 aa-2.36□□□□□ -2.79
snR38snR38 COG5P53951 403 aa-2.36□□□□□ -2.79
snR38snR38 NMA1Q06178 401 aaKnown RBP-2.36□□□□□ -2.79
snR38snR38 YOL014WQ08110 124 aa-2.36□□□□□ -2.79
snR38snR38 YBR072C-AQ3E794 53 aa-2.36□□□□□ -2.79
snR38snR38 KTI11Q3E840 82 aa-2.36□□□□□ -2.79
snR38snR38 URA6P15700 204 aa-2.37□□□□□ -2.79
snR38snR38 RPA12P32529 125 aaKnown RBP-2.37□□□□□ -2.79
snR38snR38 YCR087C-AP37263 153 aa-2.37□□□□□ -2.79
snR38snR38 CUE1P38428 203 aa-2.37□□□□□ -2.79
snR38snR38 PNC1P53184 216 aaKnown RBP-2.37□□□□□ -2.79
snR38snR38 MGR3Q04472 501 aa-2.37□□□□□ -2.79
snR38snR38 TY4B-HP0C2J7 1802 aa-2.38□□□□□ -2.79
snR38snR38 UBR1P19812 1950 aa-2.38□□□□□ -2.79
snR38snR38 CDC28P00546 298 aaKnown RBP-2.38□□□□□ -2.79
snR38snR38 SPT3P06844 337 aa-2.38□□□□□ -2.79
snR38snR38 RPS24AP0CX31 135 aaKnown RBP-2.38□□□□□ -2.79
snR38snR38 RPS24BP0CX32 135 aaKnown RBP-2.38□□□□□ -2.79
snR38snR38 MRPL31P14063 131 aaPredicted RBP-2.38□□□□□ -2.79
snR38snR38 MIC12P38341 106 aa-2.38□□□□□ -2.79
snR38snR38 YHR173CP38864 112 aa-2.38□□□□□ -2.79
snR38snR38 SRP14P38985 146 aa-2.38□□□□□ -2.79
snR38snR38 YLR036CQ07986 203 aa-2.38□□□□□ -2.79
snR38snR38 YHR214C-EQ8TGK0 99 aa-2.38□□□□□ -2.79
snR38snR38 COX2P00410 251 aa-2.39□□□□□ -2.79
snR38snR38 RRT1P38192 103 aa-2.39□□□□□ -2.79
snR38snR38 YBR013CP38215 129 aa-2.39□□□□□ -2.79
snR38snR38 HMF1P40037 129 aaKnown RBP-2.39□□□□□ -2.79
snR38snR38 FUS2Q05670 677 aa-2.39□□□□□ -2.79
snR38snR38 YCR016WP25617 290 aaKnown RBP-2.4□□□□□ -2.79
snR38snR38 RTT105P40063 208 aa-2.4□□□□□ -2.79
snR38snR38 NSA2P40078 261 aaKnown RBP-2.4□□□□□ -2.79
snR38snR38 OSW5P40219 148 aa-2.4□□□□□ -2.79
snR38snR38 SKI6P46948 246 aaPredicted RBP-2.4□□□□□ -2.79
snR38snR38 ICS3P47034 131 aa-2.4□□□□□ -2.79
snR38snR38 MIC27P50945 234 aa-2.4□□□□□ -2.79
snR38snR38 FYV6P53913 173 aa-2.4□□□□□ -2.79
snR38snR38 YML100W-AQ8TGT0 57 aa-2.4□□□□□ -2.79
snR38snR38 FUN14P18411 198 aa-2.41□□□□□ -2.8
snR38snR38 COQ1P18900 473 aa-2.41□□□□□ -2.8
snR38snR38 ERG10P41338 398 aaKnown RBP-2.41□□□□□ -2.8
snR38snR38 RIM9Q04734 239 aa-2.41□□□□□ -2.8
snR38snR38 ATP20Q12233 115 aa-2.41□□□□□ -2.8
snR38snR38 YOR381W-AQ3E804 55 aa-2.41□□□□□ -2.8
Retrieved 100 of 5,963 RNA–protein pairs in 25.2 ms