RNA–Protein interactions for RNA: YPR002W

PDH1, Transcript of Putative 2-methylcitrate dehydratase, yeast

Gene PDH1, Length 1,551 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDH1	YPR002W	SRP21	P32342	167 aa		4.61	□□□□□ -1.67
PDH1	YPR002W	SPS18	P32572	300 aa		4.61	□□□□□ -1.67
PDH1	YPR002W	QDR3	P38227	689 aa		4.61	□□□□□ -1.67
PDH1	YPR002W	UBS1	P38290	277 aa		4.61	□□□□□ -1.67
PDH1	YPR002W	FMO1	P38866	432 aa		4.61	□□□□□ -1.67
PDH1	YPR002W	SRP14	P38985	146 aa		4.61	□□□□□ -1.67
PDH1	YPR002W	PSD1	P39006	500 aa		4.61	□□□□□ -1.67
PDH1	YPR002W	YER079W	P40052	210 aa	Known RBP	4.61	□□□□□ -1.67
PDH1	YPR002W	GAT2	P40209	560 aa		4.61	□□□□□ -1.67
PDH1	YPR002W	REE1	P40893	198 aa		4.61	□□□□□ -1.67
PDH1	YPR002W	DAD3	P69850	94 aa		4.61	□□□□□ -1.67
PDH1	YPR002W	YMR007W	Q03675	126 aa		4.61	□□□□□ -1.67
PDH1	YPR002W	CGI121	Q03705	181 aa	Known RBP	4.61	□□□□□ -1.67
PDH1	YPR002W	YDR391C	Q04170	232 aa		4.61	□□□□□ -1.67
PDH1	YPR002W	DPB4	Q04603	196 aa	Known RBP	4.61	□□□□□ -1.67
PDH1	YPR002W	POM33	Q12164	279 aa		4.61	□□□□□ -1.67
PDH1	YPR002W	NCE102	Q12207	173 aa	RIP-Chip data	4.61	□□□□□ -1.67	not detected
PDH1	YPR002W	HFA1	P32874	2273 aa		4.61	□□□□□ -1.67
PDH1	YPR002W	FCY2	P17064	533 aa		4.61	□□□□□ -1.67
PDH1	YPR002W	YGL010W	P25338	174 aa		4.61	□□□□□ -1.67
PDH1	YPR002W	IMP1	P28627	190 aa		4.61	□□□□□ -1.67
PDH1	YPR002W	YKL075C	P36083	450 aa		4.61	□□□□□ -1.67
PDH1	YPR002W	LTP1	P40347	161 aa		4.61	□□□□□ -1.67
PDH1	YPR002W	YPS6	P40583	537 aa		4.61	□□□□□ -1.67
PDH1	YPR002W	OST1	P41543	476 aa	Known RBP	4.61	□□□□□ -1.67
PDH1	YPR002W	ARP3	P47117	449 aa	Known RBP	4.61	□□□□□ -1.67
PDH1	YPR002W	SDC1	Q03323	175 aa		4.61	□□□□□ -1.67
PDH1	YPR002W	RIM9	Q04734	239 aa		4.61	□□□□□ -1.67
PDH1	YPR002W	YMR254C	Q04838	102 aa		4.61	□□□□□ -1.67
PDH1	YPR002W	FRQ1	Q06389	190 aa		4.61	□□□□□ -1.67
PDH1	YPR002W	ARR3	Q06598	404 aa		4.61	□□□□□ -1.67
PDH1	YPR002W	SWT1	Q12104	458 aa		4.61	□□□□□ -1.67
PDH1	YPR002W	YCL001W-B	Q96VH2	84 aa		4.61	□□□□□ -1.67
PDH1	YPR002W	RPL9A	P05738	191 aa	Known RBP	4.6	□□□□□ -1.67
PDH1	YPR002W	CDC26	P14724	124 aa		4.6	□□□□□ -1.67
PDH1	YPR002W	VMA16	P23968	213 aa		4.6	□□□□□ -1.67
PDH1	YPR002W	MCH2	P36032	473 aa		4.6	□□□□□ -1.67
PDH1	YPR002W	YIL029C	P40538	142 aa		4.6	□□□□□ -1.67
PDH1	YPR002W	RPL9B	P51401	191 aa	Known RBP	4.6	□□□□□ -1.67
PDH1	YPR002W	SAE3	P89114	91 aa		4.6	□□□□□ -1.67
PDH1	YPR002W	IZH1	Q03419	316 aa		4.6	□□□□□ -1.67
PDH1	YPR002W	HRD1	Q08109	551 aa		4.6	□□□□□ -1.67
PDH1	YPR002W	LDS2	Q08218	356 aa		4.6	□□□□□ -1.67
PDH1	YPR002W	YOR376W	Q08900	122 aa		4.6	□□□□□ -1.67
PDH1	YPR002W	FIT3	Q08907	204 aa		4.6	□□□□□ -1.67
PDH1	YPR002W	DAP1	Q12091	152 aa		4.6	□□□□□ -1.67
PDH1	YPR002W	POC4	Q12245	148 aa	Predicted RBP	4.6	□□□□□ -1.67
PDH1	YPR002W	YPS3	Q12303	508 aa		4.6	□□□□□ -1.67
PDH1	YPR002W	ATG40	Q99325	256 aa		4.6	□□□□□ -1.67
PDH1	YPR002W	MSI1	P13712	422 aa		4.59	□□□□□ -1.67
PDH1	YPR002W	MIG1	P27705	504 aa		4.59	□□□□□ -1.67
PDH1	YPR002W	UIP3	P39547	235 aa		4.59	□□□□□ -1.67
PDH1	YPR002W	YEL057C	P39983	233 aa		4.59	□□□□□ -1.67
PDH1	YPR002W	YIP5	P53108	310 aa		4.59	□□□□□ -1.67
PDH1	YPR002W	CPD1	P53314	239 aa		4.59	□□□□□ -1.67
PDH1	YPR002W	MRP51	Q02950	344 aa		4.59	□□□□□ -1.67
PDH1	YPR002W	UPS1	Q05776	175 aa		4.59	□□□□□ -1.67
PDH1	YPR002W	NAT3	Q06504	195 aa		4.59	□□□□□ -1.67
PDH1	YPR002W	NAT5	Q08689	176 aa		4.59	□□□□□ -1.67
PDH1	YPR002W	RNA15	P25299	296 aa	Predicted RBP	4.58	□□□□□ -1.68
PDH1	YPR002W	ACP1	P32463	125 aa		4.58	□□□□□ -1.68
PDH1	YPR002W	TCA17	P32613	152 aa		4.58	□□□□□ -1.68
PDH1	YPR002W	PCL7	P40186	285 aa		4.58	□□□□□ -1.68
PDH1	YPR002W	CYB5	P40312	120 aa		4.58	□□□□□ -1.68
PDH1	YPR002W	RPN14	P53196	417 aa		4.58	□□□□□ -1.68
PDH1	YPR002W	COX18	P53239	316 aa		4.58	□□□□□ -1.68
PDH1	YPR002W	BOR1	P53838	576 aa		4.58	□□□□□ -1.68
PDH1	YPR002W	LOA1	Q06508	300 aa		4.58	□□□□□ -1.68
PDH1	YPR002W	PRP11	Q07350	266 aa	Predicted RBP	4.58	□□□□□ -1.68
PDH1	YPR002W	POM34	Q12445	299 aa		4.58	□□□□□ -1.68
PDH1	YPR002W	STE4	P18851	423 aa		4.57	□□□□□ -1.68
PDH1	YPR002W	ROX3	P25046	220 aa		4.57	□□□□□ -1.68
PDH1	YPR002W	SUA7	P29055	345 aa	Predicted RBP	4.57	□□□□□ -1.68
PDH1	YPR002W	YKL187C	P34231	750 aa		4.57	□□□□□ -1.68
PDH1	YPR002W	PAU16	P35994	123 aa		4.57	□□□□□ -1.68
PDH1	YPR002W	DAD2	P36162	133 aa		4.57	□□□□□ -1.68
PDH1	YPR002W	DER1	P38307	211 aa		4.57	□□□□□ -1.68
PDH1	YPR002W	GPP2	P40106	250 aa	Known RBP	4.57	□□□□□ -1.68
PDH1	YPR002W	DFG10	P40526	253 aa		4.57	□□□□□ -1.68
PDH1	YPR002W	EGT2	P42835	1041 aa		4.57	□□□□□ -1.68
PDH1	YPR002W	YMR166C	Q03829	368 aa		4.57	□□□□□ -1.68
PDH1	YPR002W	MIX14	Q04341	121 aa		4.57	□□□□□ -1.68
PDH1	YPR002W	YFH1	Q07540	174 aa		4.57	□□□□□ -1.68
PDH1	YPR002W	YOR105W	Q08504	108 aa		4.57	□□□□□ -1.68
PDH1	YPR002W	YDL180W	Q12301	547 aa		4.57	□□□□□ -1.68
PDH1	YPR002W	YCR024C-B	Q3E7Z8	88 aa		4.57	□□□□□ -1.68
PDH1	YPR002W	YOR032W-A	Q8TGS1	66 aa		4.57	□□□□□ -1.68
PDH1	YPR002W	RPB11	P38902	120 aa		4.57	□□□□□ -1.68
PDH1	YPR002W	GLC8	P41818	229 aa		4.57	□□□□□ -1.68
PDH1	YPR002W	YJL028W	P47062	111 aa		4.57	□□□□□ -1.68
PDH1	YPR002W	YGR151C	P53287	111 aa		4.57	□□□□□ -1.68
PDH1	YPR002W	DUG3	P53871	357 aa		4.57	□□□□□ -1.68
PDH1	YPR002W	MRPL19	P53875	158 aa		4.57	□□□□□ -1.68
PDH1	YPR002W	RPL21A	Q02753	160 aa	Known RBP	4.57	□□□□□ -1.68
PDH1	YPR002W	YPR098C	Q06089	161 aa		4.57	□□□□□ -1.68
PDH1	YPR002W	RPL21B	Q12672	160 aa	Known RBP	4.57	□□□□□ -1.68
PDH1	YPR002W	VPS63	O13549	108 aa		4.56	□□□□□ -1.68
PDH1	YPR002W	YMR31	P19955	123 aa		4.56	□□□□□ -1.68
PDH1	YPR002W	ERG8	P24521	451 aa		4.56	□□□□□ -1.68
PDH1	YPR002W	HMX1	P32339	317 aa		4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 46.5 ms