RNA–Protein interactions for RNA: YPL089C

RLM1, Transcript of MADS-box transcription factor, yeast

Gene RLM1, Length 2,031 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RLM1	YPL089C	DIG2	Q03373	323 aa	Known RBP	1	□□□□□ -2.25
RLM1	YPL089C	YMR253C	Q04835	414 aa		1	□□□□□ -2.25
RLM1	YPL089C	IRC23	Q08416	157 aa		1	□□□□□ -2.25
RLM1	YPL089C	DAS2	Q12084	232 aa		1	□□□□□ -2.25
RLM1	YPL089C	MET5	P47169	1442 aa		1	□□□□□ -2.25
RLM1	YPL089C	SEC11	P15367	167 aa		0.99	□□□□□ -2.25
RLM1	YPL089C	YNL200C	P40165	246 aa	Known RBP	0.99	□□□□□ -2.25
RLM1	YPL089C	XPT1	P47165	209 aa		0.99	□□□□□ -2.25
RLM1	YPL089C	SBH2	P52871	88 aa		0.99	□□□□□ -2.25
RLM1	YPL089C	TMA20	P89886	181 aa	Predicted RBP	0.99	□□□□□ -2.25
RLM1	YPL089C	MAK3	Q03503	176 aa		0.99	□□□□□ -2.25
RLM1	YPL089C	THI74	Q04083	370 aa		0.99	□□□□□ -2.25
RLM1	YPL089C	GAL83	Q04739	417 aa		0.99	□□□□□ -2.25
RLM1	YPL089C	ATP20	Q12233	115 aa		0.99	□□□□□ -2.25
RLM1	YPL089C	YOR214C	Q12282	236 aa		0.99	□□□□□ -2.25
RLM1	YPL089C	FYV4	P38783	130 aa	Predicted RBP	0.99	□□□□□ -2.25
RLM1	YPL089C	YPL073C	P40323	161 aa		0.99	□□□□□ -2.25
RLM1	YPL089C	TIM13	P53299	105 aa		0.99	□□□□□ -2.25
RLM1	YPL089C	RNH202	Q05635	350 aa		0.99	□□□□□ -2.25
RLM1	YPL089C	ANT1	Q06497	328 aa		0.99	□□□□□ -2.25
RLM1	YPL089C	FLO9	P39712	1322 aa		0.99	□□□□□ -2.25
RLM1	YPL089C	UBI4	P0CG63	381 aa	Known RBP	0.98	□□□□□ -2.25
RLM1	YPL089C	PHO85	P17157	305 aa		0.98	□□□□□ -2.25
RLM1	YPL089C	STP22	P25604	385 aa		0.98	□□□□□ -2.25
RLM1	YPL089C	TMA19	P35691	167 aa	Known RBP	0.98	□□□□□ -2.25
RLM1	YPL089C	YKR045C	P36138	183 aa		0.98	□□□□□ -2.25
RLM1	YPL089C	YNL033W	P53964	284 aa		0.98	□□□□□ -2.25
RLM1	YPL089C	YDR476C	Q03362	224 aa		0.98	□□□□□ -2.25
RLM1	YPL089C	YPR127W	Q06494	345 aa		0.98	□□□□□ -2.25
RLM1	YPL089C	YPR174C	Q06616	221 aa	Predicted RBP	0.98	□□□□□ -2.25
RLM1	YPL089C	YPR202W	Q08993	238 aa		0.98	□□□□□ -2.25
RLM1	YPL089C	YPR013C	Q12145	317 aa		0.98	□□□□□ -2.25
RLM1	YPL089C	EFG1	Q3E705	233 aa	Known RBP	0.98	□□□□□ -2.25
RLM1	YPL089C	PET20	Q99373	253 aa		0.98	□□□□□ -2.25
RLM1	YPL089C	HSP30	P25619	332 aa		0.98	□□□□□ -2.25
RLM1	YPL089C	RRT1	P38192	103 aa		0.98	□□□□□ -2.25
RLM1	YPL089C	YBR219C	P38317	127 aa		0.98	□□□□□ -2.25
RLM1	YPL089C	YBR220C	P38318	560 aa		0.98	□□□□□ -2.25
RLM1	YPL089C	YKR005C	Q02203	525 aa		0.98	□□□□□ -2.25
RLM1	YPL089C	VPS28	Q02767	242 aa		0.98	□□□□□ -2.25
RLM1	YPL089C	BUB2	P26448	306 aa	Predicted RBP	0.97	□□□□□ -2.25
RLM1	YPL089C	SLM6	P38343	150 aa		0.97	□□□□□ -2.25
RLM1	YPL089C	ORM1	P53224	222 aa		0.97	□□□□□ -2.25
RLM1	YPL089C	NQM1	P53228	333 aa	Predicted RBP	0.97	□□□□□ -2.25
RLM1	YPL089C	RAD6	P06104	172 aa		0.96	□□□□□ -2.26
RLM1	YPL089C	PBI2	P0CT04	75 aa	Known RBP	0.96	□□□□□ -2.26
RLM1	YPL089C	RPL2A	P0CX45	254 aa	Known RBP	0.96	□□□□□ -2.26
RLM1	YPL089C	RPL2B	P0CX46	254 aa	Known RBP	0.96	□□□□□ -2.26
RLM1	YPL089C	NUF2	P33895	451 aa		0.96	□□□□□ -2.26
RLM1	YPL089C	LSM3	P57743	89 aa	Known RBP	0.96	□□□□□ -2.26
RLM1	YPL089C	DAD4	P69851	72 aa		0.96	□□□□□ -2.26
RLM1	YPL089C	YLR162W	Q06235	118 aa		0.96	□□□□□ -2.26
RLM1	YPL089C	PRP11	Q07350	266 aa	Predicted RBP	0.96	□□□□□ -2.26
RLM1	YPL089C	CSI2	Q08054	341 aa		0.96	□□□□□ -2.26
RLM1	YPL089C	YLR046C	Q12253	270 aa		0.96	□□□□□ -2.26
RLM1	YPL089C	COX8	P04039	78 aa		0.96	□□□□□ -2.26
RLM1	YPL089C	PET54	P10834	293 aa		0.96	□□□□□ -2.26
RLM1	YPL089C	PEX34	P25584	144 aa		0.96	□□□□□ -2.26
RLM1	YPL089C	SRP102	P36057	244 aa	Predicted RBP	0.96	□□□□□ -2.26
RLM1	YPL089C	YHL018W	P38744	120 aa	Predicted RBP	0.96	□□□□□ -2.26
RLM1	YPL089C	YEL028W	P39989	153 aa		0.96	□□□□□ -2.26
RLM1	YPL089C	APQ12	P40532	138 aa		0.96	□□□□□ -2.26
RLM1	YPL089C	GLR1	P41921	483 aa	Known RBP	0.96	□□□□□ -2.26
RLM1	YPL089C	THG1	P53215	237 aa	Known RBP	0.96	□□□□□ -2.26
RLM1	YPL089C	YHR007C-A	Q07074	71 aa		0.96	□□□□□ -2.26
RLM1	YPL089C	FAS1	P07149	2051 aa	Known RBP	0.95	□□□□□ -2.26
RLM1	YPL089C	MSB2	P32334	1306 aa		0.95	□□□□□ -2.26
RLM1	YPL089C	MDM35	O60200	86 aa		0.95	□□□□□ -2.26
RLM1	YPL089C	ATP5	P09457	212 aa		0.95	□□□□□ -2.26
RLM1	YPL089C	RPL30	P14120	105 aa	Known RBP	0.95	□□□□□ -2.26
RLM1	YPL089C	GSP2	P32836	220 aa	Known RBP	0.95	□□□□□ -2.26
RLM1	YPL089C	SFK1	P35735	353 aa		0.95	□□□□□ -2.26
RLM1	YPL089C	YER135C	P40082	130 aa		0.95	□□□□□ -2.26
RLM1	YPL089C	RIO2	P40160	425 aa	Known RBP	0.95	□□□□□ -2.26
RLM1	YPL089C	DLS1	P40366	167 aa		0.95	□□□□□ -2.26
RLM1	YPL089C	GRX5	Q02784	150 aa		0.95	□□□□□ -2.26
RLM1	YPL089C	PIR1	Q03178	341 aa		0.95	□□□□□ -2.26
RLM1	YPL089C	RIM9	Q04734	239 aa		0.95	□□□□□ -2.26
RLM1	YPL089C	YOR015W	Q12169	119 aa		0.95	□□□□□ -2.26
RLM1	YPL089C	PST2	Q12335	198 aa	Known RBP	0.95	□□□□□ -2.26
RLM1	YPL089C	YOR381W-A	Q3E804	55 aa		0.95	□□□□□ -2.26
RLM1	YPL089C	UBC8	P28263	218 aa		0.94	□□□□□ -2.26
RLM1	YPL089C	YEL073C	P39974	107 aa		0.94	□□□□□ -2.26
RLM1	YPL089C	MOG1	P47123	218 aa		0.94	□□□□□ -2.26
RLM1	YPL089C	HHT1	P61830	136 aa		0.94	□□□□□ -2.26
RLM1	YPL089C	YDC1	Q02896	317 aa		0.94	□□□□□ -2.26
RLM1	YPL089C	SYM1	Q06563	197 aa		0.94	□□□□□ -2.26
RLM1	YPL089C	FIT2	Q08906	153 aa		0.94	□□□□□ -2.26
RLM1	YPL089C	TRM3	Q07527	1436 aa		0.94	□□□□□ -2.26
RLM1	YPL089C	QCR8	P08525	94 aa		0.94	□□□□□ -2.26
RLM1	YPL089C	FIP1	P45976	327 aa		0.94	□□□□□ -2.26
RLM1	YPL089C	DML1	Q03652	475 aa		0.94	□□□□□ -2.26
RLM1	YPL089C	GPA2	P10823	449 aa		0.93	□□□□□ -2.26
RLM1	YPL089C	YGL010W	P25338	174 aa		0.93	□□□□□ -2.26
RLM1	YPL089C	PTC1	P35182	281 aa		0.93	□□□□□ -2.26
RLM1	YPL089C	UPS2	P35200	230 aa		0.93	□□□□□ -2.26
RLM1	YPL089C	YRA2	P36036	203 aa	Known RBP RIP-Chip data	0.93	□□□□□ -2.26	not detected
RLM1	YPL089C	HTD2	P38790	280 aa	Known RBP	0.93	□□□□□ -2.26
RLM1	YPL089C	RPL13B	P40212	199 aa	Known RBP	0.93	□□□□□ -2.26
RLM1	YPL089C	NSE4	P43124	402 aa		0.93	□□□□□ -2.26

Retrieved 100 of 5,963 RNA–protein pairs in 28.1 ms