RNA–Protein interactions for RNA: YOL110W

SHR5, Transcript of Palmitoyltransferase subunit, yeast

Gene SHR5, Length 714 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHR5	YOL110W	SHB17	P36136	271 aa	Known RBP	11.64	□□□□□ -0.55
SHR5	YOL110W	YBL071C	P38185	102 aa		11.64	□□□□□ -0.55
SHR5	YOL110W	ERV25	P54837	211 aa	Known RBP	11.64	□□□□□ -0.55
SHR5	YOL110W	YHP1	Q04116	353 aa		11.64	□□□□□ -0.55
SHR5	YOL110W	ARR3	Q06598	404 aa		11.64	□□□□□ -0.55
SHR5	YOL110W	FPR2	P32472	135 aa		11.63	□□□□□ -0.55
SHR5	YOL110W	QDR3	P38227	689 aa		11.63	□□□□□ -0.55
SHR5	YOL110W	GPP2	P40106	250 aa	Known RBP	11.63	□□□□□ -0.55
SHR5	YOL110W	BOR1	P53838	576 aa		11.63	□□□□□ -0.55
SHR5	YOL110W	TMA23	Q03525	211 aa		11.63	□□□□□ -0.55
SHR5	YOL110W	POM34	Q12445	299 aa		11.63	□□□□□ -0.55
SHR5	YOL110W	MRPL38	P35996	138 aa	Predicted RBP	11.62	□□□□□ -0.55
SHR5	YOL110W	YKL075C	P36083	450 aa		11.62	□□□□□ -0.55
SHR5	YOL110W	TIF11	P38912	153 aa	Known RBP	11.62	□□□□□ -0.55
SHR5	YOL110W	WWM1	P43582	211 aa	Known RBP	11.62	□□□□□ -0.55
SHR5	YOL110W	MIC27	P50945	234 aa		11.62	□□□□□ -0.55
SHR5	YOL110W	CAF40	P53829	373 aa		11.62	□□□□□ -0.55
SHR5	YOL110W	CTR3	Q06686	241 aa		11.62	□□□□□ -0.55
SHR5	YOL110W	POS5	Q06892	414 aa		11.62	□□□□□ -0.55
SHR5	YOL110W	SRB6	P32570	121 aa		11.61	□□□□□ -0.55
SHR5	YOL110W	YBL059W	P34224	193 aa		11.61	□□□□□ -0.55
SHR5	YOL110W	FLO5	P38894	1075 aa		11.61	□□□□□ -0.55
SHR5	YOL110W	MCM22	P47167	239 aa		11.61	□□□□□ -0.55
SHR5	YOL110W	RIB4	P50861	169 aa	Predicted RBP	11.61	□□□□□ -0.55
SHR5	YOL110W	SMD3	P43321	101 aa	Known RBP	11.6	□□□□□ -0.55
SHR5	YOL110W	YMR007W	Q03675	126 aa		11.6	□□□□□ -0.55
SHR5	YOL110W	SHH3	Q04487	196 aa		11.6	□□□□□ -0.55
SHR5	YOL110W	SDO1	Q07953	250 aa	Known RBP	11.6	□□□□□ -0.55
SHR5	YOL110W	VMA9	Q3E7B6	73 aa		11.6	□□□□□ -0.55
SHR5	YOL110W	PIS1	P06197	220 aa	Known RBP	11.59	□□□□□ -0.55
SHR5	YOL110W	ACP1	P32463	125 aa		11.59	□□□□□ -0.55
SHR5	YOL110W	PRS4	P38063	326 aa	Predicted RBP	11.59	□□□□□ -0.55
SHR5	YOL110W	RIB5	P38145	238 aa		11.59	□□□□□ -0.55
SHR5	YOL110W	PBP4	Q07362	185 aa	Known RBP	11.59	□□□□□ -0.55
SHR5	YOL110W	LDS1	P31379	325 aa		11.58	□□□□□ -0.56
SHR5	YOL110W	CDS1	P38221	457 aa		11.58	□□□□□ -0.56
SHR5	YOL110W	DER1	P38307	211 aa		11.58	□□□□□ -0.56
SHR5	YOL110W	DOG2	P38773	246 aa		11.58	□□□□□ -0.56
SHR5	YOL110W	DOG1	P38774	246 aa		11.58	□□□□□ -0.56
SHR5	YOL110W	PTC7	P38797	343 aa		11.58	□□□□□ -0.56
SHR5	YOL110W	YAR068W	P39564	161 aa		11.58	□□□□□ -0.56
SHR5	YOL110W	ISU1	Q03020	165 aa		11.58	□□□□□ -0.56
SHR5	YOL110W	AVO2	Q04749	426 aa		11.58	□□□□□ -0.56
SHR5	YOL110W	YMR316C-A	I2HB70	103 aa		11.57	□□□□□ -0.56
SHR5	YOL110W	YPS1	P32329	569 aa		11.57	□□□□□ -0.56
SHR5	YOL110W	RRT1	P38192	103 aa		11.57	□□□□□ -0.56
SHR5	YOL110W	BDH1	P39714	382 aa		11.57	□□□□□ -0.56
SHR5	YOL110W	LST7	P53237	242 aa		11.57	□□□□□ -0.56
SHR5	YOL110W	SME1	Q12330	94 aa	Predicted RBP	11.57	□□□□□ -0.56
SHR5	YOL110W	DAL3	P32459	195 aa		11.56	□□□□□ -0.56
SHR5	YOL110W	AVT5	P38176	459 aa		11.56	□□□□□ -0.56
SHR5	YOL110W	YGR018C	P53211	109 aa		11.56	□□□□□ -0.56
SHR5	YOL110W	SPG4	Q04438	115 aa		11.56	□□□□□ -0.56
SHR5	YOL110W	IRC23	Q08416	157 aa		11.56	□□□□□ -0.56
SHR5	YOL110W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	11.55	□□□□□ -0.56	not detected
SHR5	YOL110W	INO2	P26798	304 aa		11.55	□□□□□ -0.56
SHR5	YOL110W	CSH1	P38287	376 aa		11.55	□□□□□ -0.56
SHR5	YOL110W	SAS2	P40963	338 aa		11.55	□□□□□ -0.56
SHR5	YOL110W	PAU4	P53427	120 aa		11.55	□□□□□ -0.56
SHR5	YOL110W	DUG3	P53871	357 aa		11.55	□□□□□ -0.56
SHR5	YOL110W	YCR022C	P25620	114 aa		11.54	□□□□□ -0.56
SHR5	YOL110W	GNP1	P48813	663 aa		11.54	□□□□□ -0.56
SHR5	YOL110W	RXT3	Q07458	294 aa		11.54	□□□□□ -0.56
SHR5	YOL110W	YOR352W	Q08816	343 aa		11.54	□□□□□ -0.56
SHR5	YOL110W	ALK2	P32789	676 aa	Predicted RBP	11.53	□□□□□ -0.56
SHR5	YOL110W	RPL14A	P36105	138 aa	Known RBP	11.53	□□□□□ -0.56
SHR5	YOL110W	YCR041W	P37265	110 aa		11.53	□□□□□ -0.56
SHR5	YOL110W	RPL14B	P38754	138 aa	Known RBP	11.53	□□□□□ -0.56
SHR5	YOL110W	RTS2	P40962	232 aa		11.53	□□□□□ -0.56
SHR5	YOL110W	ATC1	Q04005	294 aa		11.53	□□□□□ -0.56
SHR5	YOL110W	SDH7	Q04401	133 aa		11.53	□□□□□ -0.56
SHR5	YOL110W	TAX4	P47030	604 aa		11.52	□□□□□ -0.57
SHR5	YOL110W	CDC7	P06243	507 aa		11.51	□□□□□ -0.57
SHR5	YOL110W	SWT21	P53873	357 aa	Predicted RBP	11.51	□□□□□ -0.57
SHR5	YOL110W	HOR7	Q05827	59 aa		11.51	□□□□□ -0.57
SHR5	YOL110W	Q0142	Q9ZZW4	58 aa		11.51	□□□□□ -0.57
SHR5	YOL110W	PET494	P07390	489 aa	Predicted RBP	11.5	□□□□□ -0.57
SHR5	YOL110W	ATG27	P46989	271 aa		11.5	□□□□□ -0.57
SHR5	YOL110W	VPS55	P47111	140 aa		11.5	□□□□□ -0.57
SHR5	YOL110W	CPD1	P53314	239 aa		11.5	□□□□□ -0.57
SHR5	YOL110W	MOT3	P54785	490 aa	Known RBP	11.5	□□□□□ -0.57
SHR5	YOL110W	PAU1	P0CE88	120 aa		11.49	□□□□□ -0.57
SHR5	YOL110W	PAU14	P0CE89	120 aa		11.49	□□□□□ -0.57
SHR5	YOL110W	PAU6	P0CE90	120 aa		11.49	□□□□□ -0.57
SHR5	YOL110W	PAU18	P0CE91	120 aa		11.49	□□□□□ -0.57
SHR5	YOL110W	PAU8	P0CE92	120 aa		11.49	□□□□□ -0.57
SHR5	YOL110W	PAU11	P0CE93	120 aa		11.49	□□□□□ -0.57
SHR5	YOL110W	PAU13	P38725	120 aa		11.49	□□□□□ -0.57
SHR5	YOL110W	PAU10	Q03050	120 aa		11.49	□□□□□ -0.57
SHR5	YOL110W	YML122C	Q03207	126 aa		11.49	□□□□□ -0.57
SHR5	YOL110W	PAU20	Q08322	120 aa		11.49	□□□□□ -0.57
SHR5	YOL110W	PAU9	Q3E770	120 aa		11.49	□□□□□ -0.57
SHR5	YOL110W	MRP2	P10663	115 aa	Predicted RBP	11.48	□□□□□ -0.57
SHR5	YOL110W	RPS2	P25443	254 aa	Known RBP	11.48	□□□□□ -0.57
SHR5	YOL110W	PET100	P38958	111 aa		11.48	□□□□□ -0.57
SHR5	YOL110W	YGR219W	P53307	113 aa		11.48	□□□□□ -0.57
SHR5	YOL110W	MSA1	Q08471	629 aa		11.48	□□□□□ -0.57
SHR5	YOL110W	TY1A-DR3	Q12441	440 aa		11.48	□□□□□ -0.57
SHR5	YOL110W	DSK2	P48510	373 aa		11.47	□□□□□ -0.57
SHR5	YOL110W	TOS8	P53147	276 aa		11.47	□□□□□ -0.57

Retrieved 100 of 5,963 RNA–protein pairs in 62.5 ms