RNA–Protein interactions for RNA: YNL197C

WHI3, Transcript of RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci, yeastyeast

Gene WHI3, Length 1,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
WHI3YNL197C MET5P47169 1442 aa1.96□□□□□ -2.1
WHI3YNL197C TMA19P35691 167 aaKnown RBP1.96□□□□□ -2.1
WHI3YNL197C YBR219CP38317 127 aa1.96□□□□□ -2.1
WHI3YNL197C TVP23P38962 199 aa1.96□□□□□ -2.1
WHI3YNL197C CUP9P41817 306 aa1.96□□□□□ -2.1
WHI3YNL197C SAY1P53324 424 aa1.96□□□□□ -2.1
WHI3YNL197C GAL83Q04739 417 aa1.96□□□□□ -2.1
WHI3YNL197C YLR162WQ06235 118 aa1.96□□□□□ -2.1
WHI3YNL197C NSP1P14907 823 aaKnown RBP1.96□□□□□ -2.1
WHI3YNL197C SLM6P38343 150 aa1.96□□□□□ -2.1
WHI3YNL197C THI74Q04083 370 aa1.96□□□□□ -2.1
WHI3YNL197C FLO9P39712 1322 aa1.95□□□□□ -2.1
WHI3YNL197C DER1P38307 211 aa1.95□□□□□ -2.1
WHI3YNL197C YER135CP40082 130 aa1.95□□□□□ -2.1
WHI3YNL197C YPL073CP40323 161 aa1.95□□□□□ -2.1
WHI3YNL197C YFH7P43591 353 aa1.95□□□□□ -2.1
WHI3YNL197C MPA43P53583 542 aaPredicted RBP1.95□□□□□ -2.1
WHI3YNL197C PST2Q12335 198 aaKnown RBP1.95□□□□□ -2.1
WHI3YNL197C UBI4P0CG63 381 aaKnown RBP1.94□□□□□ -2.1
WHI3YNL197C RRT1P38192 103 aa1.94□□□□□ -2.1
WHI3YNL197C FIG1P38224 298 aa1.94□□□□□ -2.1
WHI3YNL197C NSA2P40078 261 aaKnown RBP1.94□□□□□ -2.1
WHI3YNL197C XPT1P47165 209 aa1.94□□□□□ -2.1
WHI3YNL197C DAD4P69851 72 aa1.94□□□□□ -2.1
WHI3YNL197C YPR127WQ06494 345 aa1.94□□□□□ -2.1
WHI3YNL197C CSI2Q08054 341 aa1.94□□□□□ -2.1
WHI3YNL197C YHL018WP38744 120 aaPredicted RBP1.94□□□□□ -2.1
WHI3YNL197C THG1P53215 237 aaKnown RBP1.94□□□□□ -2.1
WHI3YNL197C ORM1P53224 222 aa1.94□□□□□ -2.1
WHI3YNL197C YPR202WQ08993 238 aa1.94□□□□□ -2.1
WHI3YNL197C YOR214CQ12282 236 aa1.94□□□□□ -2.1
WHI3YNL197C YBR220CP38318 560 aa1.93□□□□□ -2.1
WHI3YNL197C SBH1P52870 82 aa1.93□□□□□ -2.1
WHI3YNL197C YGL101WP53144 215 aa1.93□□□□□ -2.1
WHI3YNL197C STP22P25604 385 aa1.92□□□□□ -2.1
WHI3YNL197C YPR013CQ12145 317 aa1.92□□□□□ -2.1
WHI3YNL197C YLR422WQ06409 1932 aa1.92□□□□□ -2.1
WHI3YNL197C CYR1P08678 2026 aaKnown RBP1.92□□□□□ -2.1
WHI3YNL197C TMA20P89886 181 aaPredicted RBP1.92□□□□□ -2.1
WHI3YNL197C YPR174CQ06616 221 aaPredicted RBP1.92□□□□□ -2.1
WHI3YNL197C PRP11Q07350 266 aaPredicted RBP1.92□□□□□ -2.1
WHI3YNL197C YLR046CQ12253 270 aa1.92□□□□□ -2.1
WHI3YNL197C EFG1Q3E705 233 aaKnown RBP1.92□□□□□ -2.1
WHI3YNL197C YOR381W-AQ3E804 55 aa1.92□□□□□ -2.1
WHI3YNL197C PET20Q99373 253 aa1.92□□□□□ -2.1
WHI3YNL197C YKR005CQ02203 525 aa1.91□□□□□ -2.1
WHI3YNL197C BEM2P39960 2167 aaKnown RBP1.91□□□□□ -2.1
WHI3YNL197C COX8P04039 78 aa1.9□□□□□ -2.1
WHI3YNL197C RPS28BP0C0X0 67 aaKnown RBP1.9□□□□□ -2.1
WHI3YNL197C HSP30P25619 332 aa1.9□□□□□ -2.1
WHI3YNL197C UBC8P28263 218 aa1.9□□□□□ -2.1
WHI3YNL197C NUF2P33895 451 aa1.9□□□□□ -2.1
WHI3YNL197C RPS28AQ3E7X9 67 aaPredicted RBP1.9□□□□□ -2.1
WHI3YNL197C MDM35O60200 86 aa1.9□□□□□ -2.11
WHI3YNL197C UPS2P35200 230 aa1.9□□□□□ -2.11
WHI3YNL197C LSM3P57743 89 aaKnown RBP1.9□□□□□ -2.11
WHI3YNL197C FIT2Q08906 153 aa1.9□□□□□ -2.11
WHI3YNL197C YOR015WQ12169 119 aa1.9□□□□□ -2.11
WHI3YNL197C MSB2P32334 1306 aa1.89□□□□□ -2.11
WHI3YNL197C BAT2P47176 376 aaKnown RBP1.89□□□□□ -2.11
WHI3YNL197C VPS28Q02767 242 aa1.89□□□□□ -2.11
WHI3YNL197C MAK3Q03503 176 aa1.89□□□□□ -2.11
WHI3YNL197C DML1Q03652 475 aa1.89□□□□□ -2.11
WHI3YNL197C RIM9Q04734 239 aa1.89□□□□□ -2.11
WHI3YNL197C RPL2AP0CX45 254 aaKnown RBP1.88□□□□□ -2.11
WHI3YNL197C RPL2BP0CX46 254 aaKnown RBP1.88□□□□□ -2.11
WHI3YNL197C YGL010WP25338 174 aa1.88□□□□□ -2.11
WHI3YNL197C GLR1P41921 483 aaKnown RBP1.88□□□□□ -2.11
WHI3YNL197C SBH2P52871 88 aa1.88□□□□□ -2.11
WHI3YNL197C NQM1P53228 333 aaPredicted RBP1.88□□□□□ -2.11
WHI3YNL197C YDC1Q02896 317 aa1.88□□□□□ -2.11
WHI3YNL197C RPL30P14120 105 aaKnown RBP1.87□□□□□ -2.11
WHI3YNL197C GSP2P32836 220 aaKnown RBP1.87□□□□□ -2.11
WHI3YNL197C YEL028WP39989 153 aa1.87□□□□□ -2.11
WHI3YNL197C MPM1P40364 252 aa1.87□□□□□ -2.11
WHI3YNL197C APQ12P40532 138 aa1.87□□□□□ -2.11
WHI3YNL197C TIM13P53299 105 aa1.87□□□□□ -2.11
WHI3YNL197C UPS1Q05776 175 aa1.87□□□□□ -2.11
WHI3YNL197C SYM1Q06563 197 aa1.87□□□□□ -2.11
WHI3YNL197C SFK1P35735 353 aa1.87□□□□□ -2.11
WHI3YNL197C RPL13BP40212 199 aaKnown RBP1.87□□□□□ -2.11
WHI3YNL197C NSE4P43124 402 aa1.87□□□□□ -2.11
WHI3YNL197C RPL13AQ12690 199 aaPredicted RBP1.87□□□□□ -2.11
WHI3YNL197C ATP5P09457 212 aa1.86□□□□□ -2.11
WHI3YNL197C DLS1P40366 167 aa1.86□□□□□ -2.11
WHI3YNL197C FLX1P40464 311 aa1.86□□□□□ -2.11
WHI3YNL197C FIP1P45976 327 aa1.86□□□□□ -2.11
WHI3YNL197C PIR1Q03178 341 aa1.86□□□□□ -2.11
WHI3YNL197C YHP1Q04116 353 aa1.86□□□□□ -2.11
WHI3YNL197C DUR1,2P32528 1835 aaKnown RBP1.86□□□□□ -2.11
WHI3YNL197C YOL162WP0CF19 215 aa1.85□□□□□ -2.11
WHI3YNL197C BUB2P26448 306 aaPredicted RBP1.85□□□□□ -2.11
WHI3YNL197C YEL073CP39974 107 aa1.85□□□□□ -2.11
WHI3YNL197C YAE1P47118 141 aaPredicted RBP1.85□□□□□ -2.11
WHI3YNL197C YDR102CQ03864 110 aa1.85□□□□□ -2.11
WHI3YNL197C YHR007C-AQ07074 71 aa1.85□□□□□ -2.11
WHI3YNL197C ATG41Q12048 136 aa1.85□□□□□ -2.11
WHI3YNL197C RAD6P06104 172 aa1.85□□□□□ -2.11
WHI3YNL197C GPA2P10823 449 aa1.85□□□□□ -2.11
WHI3YNL197C HPA3P39979 161 aa1.85□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 39.1 ms