RNA–Protein interactions for RNA: YML040W

YML040W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YML040W, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YML040WYML040W YKR045CP36138 183 aa2.65□□□□□ -1.99
YML040WYML040W PAM17P36147 197 aa2.65□□□□□ -1.99
YML040WYML040W FIG1P38224 298 aa2.65□□□□□ -1.99
YML040WYML040W CUP9P41817 306 aa2.65□□□□□ -1.99
YML040WYML040W YFH7P43591 353 aa2.65□□□□□ -1.99
YML040WYML040W YNL033WP53964 284 aa2.65□□□□□ -1.99
YML040WYML040W DIG2Q03373 323 aaKnown RBP2.65□□□□□ -1.99
YML040WYML040W THI74Q04083 370 aa2.65□□□□□ -1.99
YML040WYML040W GAL83Q04739 417 aa2.65□□□□□ -1.99
YML040WYML040W NSP1P14907 823 aaKnown RBP2.64□□□□□ -1.99
YML040WYML040W YPR127WQ06494 345 aa2.64□□□□□ -1.99
YML040WYML040W MET5P47169 1442 aa2.63□□□□□ -1.99
YML040WYML040W TVP23P38962 199 aa2.63□□□□□ -1.99
YML040WYML040W YGL101WP53144 215 aa2.63□□□□□ -1.99
YML040WYML040W TMA19P35691 167 aaKnown RBP2.62□□□□□ -1.99
YML040WYML040W SLM6P38343 150 aa2.62□□□□□ -1.99
YML040WYML040W TMA20P89886 181 aaPredicted RBP2.62□□□□□ -1.99
YML040WYML040W EFG1Q3E705 233 aaKnown RBP2.62□□□□□ -1.99
YML040WYML040W RPS28BP0C0X0 67 aaKnown RBP2.61□□□□□ -1.99
YML040WYML040W NUF2P33895 451 aa2.61□□□□□ -1.99
YML040WYML040W RRT1P38192 103 aa2.61□□□□□ -1.99
YML040WYML040W DAD4P69851 72 aa2.61□□□□□ -1.99
YML040WYML040W YLR162WQ06235 118 aa2.61□□□□□ -1.99
YML040WYML040W YOR214CQ12282 236 aa2.61□□□□□ -1.99
YML040WYML040W RPS28AQ3E7X9 67 aaPredicted RBP2.61□□□□□ -1.99
YML040WYML040W UBI4P0CG63 381 aaKnown RBP2.6□□□□□ -1.99
YML040WYML040W YER135CP40082 130 aa2.6□□□□□ -1.99
YML040WYML040W YPL073CP40323 161 aa2.6□□□□□ -1.99
YML040WYML040W SBH1P52870 82 aa2.6□□□□□ -1.99
YML040WYML040W ORM1P53224 222 aa2.6□□□□□ -1.99
YML040WYML040W MAK3Q03503 176 aa2.6□□□□□ -1.99
YML040WYML040W FLO9P39712 1322 aa2.59□□□□□ -1.99
YML040WYML040W STP22P25604 385 aa2.59□□□□□ -2
YML040WYML040W YBR219CP38317 127 aa2.59□□□□□ -2
YML040WYML040W YBR220CP38318 560 aa2.59□□□□□ -2
YML040WYML040W YHL018WP38744 120 aaPredicted RBP2.59□□□□□ -2
YML040WYML040W PRP11Q07350 266 aaPredicted RBP2.59□□□□□ -2
YML040WYML040W YPR013CQ12145 317 aa2.59□□□□□ -2
YML040WYML040W YLR046CQ12253 270 aa2.59□□□□□ -2
YML040WYML040W PST2Q12335 198 aaKnown RBP2.59□□□□□ -2
YML040WYML040W PET20Q99373 253 aa2.59□□□□□ -2
YML040WYML040W THG1P53215 237 aaKnown RBP2.58□□□□□ -2
YML040WYML040W YPR202WQ08993 238 aa2.58□□□□□ -2
YML040WYML040W YOR381W-AQ3E804 55 aa2.58□□□□□ -2
YML040WYML040W SBH2P52871 88 aa2.57□□□□□ -2
YML040WYML040W LSM3P57743 89 aaKnown RBP2.57□□□□□ -2
YML040WYML040W YPR174CQ06616 221 aaPredicted RBP2.57□□□□□ -2
YML040WYML040W HSP30P25619 332 aa2.56□□□□□ -2
YML040WYML040W UBC8P28263 218 aa2.56□□□□□ -2
YML040WYML040W GLR1P41921 483 aaKnown RBP2.56□□□□□ -2
YML040WYML040W TIM13P53299 105 aa2.56□□□□□ -2
YML040WYML040W YKR005CQ02203 525 aa2.56□□□□□ -2
YML040WYML040W CSI2Q08054 341 aa2.56□□□□□ -2
YML040WYML040W MDM35O60200 86 aa2.55□□□□□ -2
YML040WYML040W COX8P04039 78 aa2.55□□□□□ -2
YML040WYML040W RPL2AP0CX45 254 aaKnown RBP2.55□□□□□ -2
YML040WYML040W RPL2BP0CX46 254 aaKnown RBP2.55□□□□□ -2
YML040WYML040W UPS2P35200 230 aa2.55□□□□□ -2
YML040WYML040W NQM1P53228 333 aaPredicted RBP2.55□□□□□ -2
YML040WYML040W VPS28Q02767 242 aa2.55□□□□□ -2
YML040WYML040W FIT2Q08906 153 aa2.55□□□□□ -2
YML040WYML040W YOR015WQ12169 119 aa2.55□□□□□ -2
YML040WYML040W FAS1P07149 2051 aaKnown RBP2.54□□□□□ -2
YML040WYML040W BUB2P26448 306 aaPredicted RBP2.54□□□□□ -2
YML040WYML040W APQ12P40532 138 aa2.54□□□□□ -2
YML040WYML040W MOG1P47123 218 aa2.54□□□□□ -2
YML040WYML040W YDC1Q02896 317 aa2.54□□□□□ -2
YML040WYML040W YDR476CQ03362 224 aa2.54□□□□□ -2
YML040WYML040W SFK1P35735 353 aa2.53□□□□□ -2
YML040WYML040W DLS1P40366 167 aa2.53□□□□□ -2
YML040WYML040W RAD6P06104 172 aa2.52□□□□□ -2.01
YML040WYML040W ATP5P09457 212 aa2.52□□□□□ -2.01
YML040WYML040W YGL010WP25338 174 aa2.52□□□□□ -2.01
YML040WYML040W RPL13BP40212 199 aaKnown RBP2.52□□□□□ -2.01
YML040WYML040W NSE4P43124 402 aa2.52□□□□□ -2.01
YML040WYML040W DML1Q03652 475 aa2.52□□□□□ -2.01
YML040WYML040W RIM9Q04734 239 aa2.52□□□□□ -2.01
YML040WYML040W SYM1Q06563 197 aa2.52□□□□□ -2.01
YML040WYML040W RPL13AQ12690 199 aaPredicted RBP2.52□□□□□ -2.01
YML040WYML040W RPL30P14120 105 aaKnown RBP2.51□□□□□ -2.01
YML040WYML040W GSP2P32836 220 aaKnown RBP2.51□□□□□ -2.01
YML040WYML040W YEL073CP39974 107 aa2.51□□□□□ -2.01
YML040WYML040W YEL028WP39989 153 aa2.51□□□□□ -2.01
YML040WYML040W PAC10P48363 199 aa2.51□□□□□ -2.01
YML040WYML040W UPS1Q05776 175 aa2.51□□□□□ -2.01
YML040WYML040W YHR007C-AQ07074 71 aa2.51□□□□□ -2.01
YML040WYML040W MSB2P32334 1306 aa2.51□□□□□ -2.01
YML040WYML040W PBI2P0CT04 75 aaKnown RBP2.5□□□□□ -2.01
YML040WYML040W PEX34P25584 144 aa2.5□□□□□ -2.01
YML040WYML040W HPA3P39979 161 aa2.5□□□□□ -2.01
YML040WYML040W FLX1P40464 311 aa2.5□□□□□ -2.01
YML040WYML040W FIP1P45976 327 aa2.5□□□□□ -2.01
YML040WYML040W BAT2P47176 376 aaKnown RBP2.5□□□□□ -2.01
YML040WYML040W YHP1Q04116 353 aa2.5□□□□□ -2.01
YML040WYML040W GPA2P10823 449 aa2.49□□□□□ -2.01
YML040WYML040W YRA2P36036 203 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
YML040WYML040W MPM1P40364 252 aa2.49□□□□□ -2.01
YML040WYML040W LSM1P47017 172 aaKnown RBP2.49□□□□□ -2.01
YML040WYML040W PIR1Q03178 341 aa2.49□□□□□ -2.01
YML040WYML040W YDR102CQ03864 110 aa2.49□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 1026.1 ms