RNA–Protein interactions for RNA: YLR275W

SMD2, Transcript of Core Sm protein Sm D2, yeastyeast

Gene SMD2, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD2YLR275W YHL042WP38729 150 aa1.3□□□□□ -2.2
SMD2YLR275W HPA3P39979 161 aa1.3□□□□□ -2.2
SMD2YLR275W NSA2P40078 261 aaKnown RBP1.3□□□□□ -2.2
SMD2YLR275W THG1P53215 237 aaKnown RBP1.3□□□□□ -2.2
SMD2YLR275W GPI17Q04080 534 aa1.3□□□□□ -2.2
SMD2YLR275W FYV12Q08559 129 aa1.3□□□□□ -2.2
SMD2YLR275W DGK1Q12382 290 aa1.3□□□□□ -2.2
SMD2YLR275W STP22P25604 385 aa1.29□□□□□ -2.2
SMD2YLR275W RPB7P34087 171 aa1.29□□□□□ -2.2
SMD2YLR275W EGD2P38879 174 aaKnown RBP1.29□□□□□ -2.2
SMD2YLR275W NVJ1P38881 321 aa1.29□□□□□ -2.2
SMD2YLR275W HPT1Q04178 221 aaKnown RBP1.29□□□□□ -2.2
SMD2YLR275W CLG1P35190 452 aa1.28□□□□□ -2.2
SMD2YLR275W SOK1P40317 901 aa1.28□□□□□ -2.2
SMD2YLR275W RFC2P40348 353 aa1.28□□□□□ -2.2
SMD2YLR275W YFL065CP43539 102 aa1.28□□□□□ -2.2
SMD2YLR275W ALB1P47019 175 aaPredicted RBP1.28□□□□□ -2.2
SMD2YLR275W PIR1Q03178 341 aa1.28□□□□□ -2.2
SMD2YLR275W UPS3Q04006 179 aa1.28□□□□□ -2.2
SMD2YLR275W YMR252CQ04814 134 aa1.28□□□□□ -2.2
SMD2YLR275W DAS2Q12084 232 aa1.28□□□□□ -2.2
SMD2YLR275W ATP20Q12233 115 aa1.28□□□□□ -2.2
SMD2YLR275W CHD1P32657 1468 aa1.28□□□□□ -2.2
SMD2YLR275W SAC3P46674 1301 aa1.27□□□□□ -2.21
SMD2YLR275W AQY2P0CD90 149 aa1.27□□□□□ -2.21
SMD2YLR275W YCR023CP25351 611 aa1.27□□□□□ -2.21
SMD2YLR275W SRP14P38985 146 aa1.27□□□□□ -2.21
SMD2YLR275W YEL067CP39978 195 aa1.27□□□□□ -2.21
SMD2YLR275W JAC1P53193 184 aa1.27□□□□□ -2.21
SMD2YLR275W YIP3P53633 176 aa1.27□□□□□ -2.21
SMD2YLR275W GAL83Q04739 417 aa1.27□□□□□ -2.21
SMD2YLR275W PEX11Q12462 236 aa1.27□□□□□ -2.21
SMD2YLR275W MAK5P38112 773 aaPredicted RBP1.26□□□□□ -2.21
SMD2YLR275W RRT1P38192 103 aa1.26□□□□□ -2.21
SMD2YLR275W YLR460CP54007 376 aa1.26□□□□□ -2.21
SMD2YLR275W GRX5Q02784 150 aa1.26□□□□□ -2.21
SMD2YLR275W RRP17Q04031 235 aaPredicted RBP1.26□□□□□ -2.21
SMD2YLR275W YOR015WQ12169 119 aa1.26□□□□□ -2.21
SMD2YLR275W FAS1P07149 2051 aaKnown RBP1.25□□□□□ -2.21
SMD2YLR275W YHR212W-AP0CX91 67 aa1.25□□□□□ -2.21
SMD2YLR275W YCL042WP25572 119 aa1.25□□□□□ -2.21
SMD2YLR275W HSP30P25619 332 aa1.25□□□□□ -2.21
SMD2YLR275W YEL008WP40001 126 aa1.25□□□□□ -2.21
SMD2YLR275W VPS28Q02767 242 aa1.25□□□□□ -2.21
SMD2YLR275W STF2P16965 84 aa1.24□□□□□ -2.21
SMD2YLR275W RAD51P25454 400 aa1.24□□□□□ -2.21
SMD2YLR275W TTI2P47168 421 aa1.24□□□□□ -2.21
SMD2YLR275W SOL1P50278 321 aa1.24□□□□□ -2.21
SMD2YLR275W TIM13P53299 105 aa1.24□□□□□ -2.21
SMD2YLR275W PLP1Q04004 230 aa1.24□□□□□ -2.21
SMD2YLR275W YPR127WQ06494 345 aa1.24□□□□□ -2.21
SMD2YLR275W YOR214CQ12282 236 aa1.24□□□□□ -2.21
SMD2YLR275W PST2Q12335 198 aaKnown RBP1.24□□□□□ -2.21
SMD2YLR275W CPR5P35176 225 aa1.23□□□□□ -2.21
SMD2YLR275W FYV4P38783 130 aaPredicted RBP1.23□□□□□ -2.21
SMD2YLR275W YKR005CQ02203 525 aa1.23□□□□□ -2.21
SMD2YLR275W YLR050CQ12155 161 aaKnown RBP1.23□□□□□ -2.21
SMD2YLR275W RPL35AP0CX84 120 aaKnown RBP1.22□□□□□ -2.21
SMD2YLR275W RPL35BP0CX85 120 aaKnown RBP1.22□□□□□ -2.21
SMD2YLR275W SEN2P16658 377 aa1.22□□□□□ -2.21
SMD2YLR275W NSE4P43124 402 aa1.22□□□□□ -2.21
SMD2YLR275W XPT1P47165 209 aa1.22□□□□□ -2.21
SMD2YLR275W YGL235WP53071 178 aa1.22□□□□□ -2.21
SMD2YLR275W MET31Q03081 177 aa1.22□□□□□ -2.21
SMD2YLR275W DML1Q03652 475 aa1.22□□□□□ -2.21
SMD2YLR275W YMR007WQ03675 126 aa1.22□□□□□ -2.21
SMD2YLR275W YHP1Q04116 353 aa1.22□□□□□ -2.21
SMD2YLR275W GIM5Q04493 163 aa1.22□□□□□ -2.21
SMD2YLR275W UPS1Q05776 175 aa1.22□□□□□ -2.21
SMD2YLR275W COA3Q3E7B2 85 aa1.22□□□□□ -2.21
SMD2YLR275W YNL200CP40165 246 aaKnown RBP1.21□□□□□ -2.22
SMD2YLR275W MPM1P40364 252 aa1.21□□□□□ -2.22
SMD2YLR275W YNL140CP53910 189 aa1.21□□□□□ -2.22
SMD2YLR275W ATG41Q12048 136 aa1.21□□□□□ -2.22
SMD2YLR275W ACC1Q00955 2233 aaKnown RBP1.2□□□□□ -2.22
SMD2YLR275W RAD6P06104 172 aa1.2□□□□□ -2.22
SMD2YLR275W CMD1P06787 147 aaKnown RBP1.2□□□□□ -2.22
SMD2YLR275W VPS51P36116 164 aa1.2□□□□□ -2.22
SMD2YLR275W SBH2P52871 88 aa1.2□□□□□ -2.22
SMD2YLR275W RIM9Q04734 239 aa1.2□□□□□ -2.22
SMD2YLR275W YMR030W-AQ3E760 96 aa1.2□□□□□ -2.22
SMD2YLR275W YOR381W-AQ3E804 55 aa1.2□□□□□ -2.22
SMD2YLR275W YLR422WQ06409 1932 aa1.19□□□□□ -2.22
SMD2YLR275W YBL010CP32788 280 aa1.19□□□□□ -2.22
SMD2YLR275W NUF2P33895 451 aa1.19□□□□□ -2.22
SMD2YLR275W YRA2P36036 203 aaKnown RBP RIP-Chip data1.19□□□□□ -2.22not detected
SMD2YLR275W GLR1P41921 483 aaKnown RBP1.19□□□□□ -2.22
SMD2YLR275W RPL37AP49166 88 aaKnown RBP1.19□□□□□ -2.22
SMD2YLR275W HHT1P61830 136 aa1.19□□□□□ -2.22
SMD2YLR275W TAR1Q8TGM6 124 aa1.19□□□□□ -2.22
SMD2YLR275W TRM3Q07527 1436 aa1.18□□□□□ -2.22
SMD2YLR275W MAK31P23059 88 aa1.18□□□□□ -2.22
SMD2YLR275W CSH1P38287 376 aa1.18□□□□□ -2.22
SMD2YLR275W CCS1P40202 249 aaKnown RBP1.18□□□□□ -2.22
SMD2YLR275W HUA1P40325 198 aa1.18□□□□□ -2.22
SMD2YLR275W THI74Q04083 370 aa1.18□□□□□ -2.22
SMD2YLR275W YDR391CQ04170 232 aa1.18□□□□□ -2.22
SMD2YLR275W ELP6Q04868 273 aa1.18□□□□□ -2.22
SMD2YLR275W CMC2Q3E7A4 109 aa1.18□□□□□ -2.22
SMD2YLR275W MRPL15P36523 253 aa1.17□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 95.3 ms