RNA–Protein interactions for RNA: YLR181C

VTA1, Transcript of Multivesicular body (MVB) protein, yeast

Gene VTA1, Length 993 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTA1	YLR181C	SPT14	P32363	452 aa		3.13	□□□□□ -1.91
VTA1	YLR181C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	3.13	□□□□□ -1.91	not detected
VTA1	YLR181C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	3.13	□□□□□ -1.91	not detected
VTA1	YLR181C	PAU24	P38155	120 aa		3.13	□□□□□ -1.91
VTA1	YLR181C	YGP1	P38616	354 aa	Known RBP	3.13	□□□□□ -1.91
VTA1	YLR181C	YFR054C	P43622	192 aa		3.13	□□□□□ -1.91
VTA1	YLR181C	YJL016W	P47072	561 aa		3.13	□□□□□ -1.91
VTA1	YLR181C	YJR146W	P47174	117 aa		3.13	□□□□□ -1.91
VTA1	YLR181C	DSK2	P48510	373 aa		3.13	□□□□□ -1.91
VTA1	YLR181C	ARO8	P53090	500 aa	Known RBP	3.13	□□□□□ -1.91
VTA1	YLR181C	CAB4	P53332	305 aa		3.13	□□□□□ -1.91
VTA1	YLR181C	RGM1	Q00453	211 aa		3.13	□□□□□ -1.91
VTA1	YLR181C	YMR252C	Q04814	134 aa		3.13	□□□□□ -1.91
VTA1	YLR181C	MCP1	Q12106	302 aa		3.13	□□□□□ -1.91
VTA1	YLR181C	GCN3	P14741	305 aa		3.12	□□□□□ -1.91
VTA1	YLR181C	BUD23	P25627	275 aa	Predicted RBP	3.12	□□□□□ -1.91
VTA1	YLR181C	HSP150	P32478	413 aa		3.12	□□□□□ -1.91
VTA1	YLR181C	TMA19	P35691	167 aa	Known RBP	3.12	□□□□□ -1.91
VTA1	YLR181C	CUP9	P41817	306 aa		3.12	□□□□□ -1.91
VTA1	YLR181C	PAM16	P42949	149 aa		3.12	□□□□□ -1.91
VTA1	YLR181C	BRR6	P53062	197 aa		3.12	□□□□□ -1.91
VTA1	YLR181C	RSM10	Q03201	203 aa		3.12	□□□□□ -1.91
VTA1	YLR181C	IRC19	Q07843	230 aa		3.12	□□□□□ -1.91
VTA1	YLR181C	AKR2	Q12013	749 aa		3.12	□□□□□ -1.91
VTA1	YLR181C	QCR7	P00128	127 aa		3.11	□□□□□ -1.91
VTA1	YLR181C	ADK1	P07170	222 aa	Known RBP	3.11	□□□□□ -1.91
VTA1	YLR181C	DBF2	P22204	572 aa		3.11	□□□□□ -1.91
VTA1	YLR181C	YCR016W	P25617	290 aa	Known RBP	3.11	□□□□□ -1.91
VTA1	YLR181C	PPA2	P28239	310 aa		3.11	□□□□□ -1.91
VTA1	YLR181C	DOA4	P32571	926 aa		3.11	□□□□□ -1.91
VTA1	YLR181C	PAU2	P32612	120 aa		3.11	□□□□□ -1.91
VTA1	YLR181C	CLB6	P32943	380 aa		3.11	□□□□□ -1.91
VTA1	YLR181C	MSN4	P33749	630 aa		3.11	□□□□□ -1.91
VTA1	YLR181C	RCN1	P36054	211 aa		3.11	□□□□□ -1.91
VTA1	YLR181C	IRC18	P47056	224 aa		3.11	□□□□□ -1.91
VTA1	YLR181C	SAY1	P53324	424 aa		3.11	□□□□□ -1.91
VTA1	YLR181C	ERV29	P53337	310 aa		3.11	□□□□□ -1.91
VTA1	YLR181C	DCR2	Q05924	578 aa		3.11	□□□□□ -1.91
VTA1	YLR181C	YOR186W	Q08560	144 aa		3.11	□□□□□ -1.91
VTA1	YLR181C	ATG41	Q12048	136 aa		3.11	□□□□□ -1.91
VTA1	YLR181C	BBP1	Q12365	385 aa		3.11	□□□□□ -1.91
VTA1	YLR181C	YIL046W-A	Q3E7Z4	54 aa		3.11	□□□□□ -1.91
VTA1	YLR181C	COX9	P07255	59 aa		3.1	□□□□□ -1.91
VTA1	YLR181C	HYM1	P32464	399 aa		3.1	□□□□□ -1.91
VTA1	YLR181C	SRP102	P36057	244 aa	Predicted RBP	3.1	□□□□□ -1.91
VTA1	YLR181C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	3.1	□□□□□ -1.91	not detected
VTA1	YLR181C	HTD2	P38790	280 aa	Known RBP	3.1	□□□□□ -1.91
VTA1	YLR181C	HPA3	P39979	161 aa		3.1	□□□□□ -1.91
VTA1	YLR181C	OST2	P46964	130 aa		3.1	□□□□□ -1.91
VTA1	YLR181C	DOC1	P53068	250 aa		3.1	□□□□□ -1.91
VTA1	YLR181C	CGI121	Q03705	181 aa	Known RBP	3.1	□□□□□ -1.91
VTA1	YLR181C	YDR249C	Q03787	373 aa		3.1	□□□□□ -1.91
VTA1	YLR181C	BNA7	Q04066	261 aa		3.1	□□□□□ -1.91
VTA1	YLR181C	MIX14	Q04341	121 aa		3.1	□□□□□ -1.91
VTA1	YLR181C	YOR283W	Q12040	230 aa	Known RBP	3.1	□□□□□ -1.91
VTA1	YLR181C	YRA1	Q12159	226 aa	Known RBP	3.1	□□□□□ -1.91
VTA1	YLR181C	YOR343C	Q12484	108 aa		3.1	□□□□□ -1.91
VTA1	YLR181C	MSW1	P04803	379 aa		3.09	□□□□□ -1.91
VTA1	YLR181C	YHR214C-D	P0CX93	97 aa		3.09	□□□□□ -1.91
VTA1	YLR181C	STE18	P18852	110 aa		3.09	□□□□□ -1.91
VTA1	YLR181C	SCO1	P23833	295 aa		3.09	□□□□□ -1.91
VTA1	YLR181C	SRL3	P36167	246 aa		3.09	□□□□□ -1.91
VTA1	YLR181C	YBR242W	P38331	238 aa		3.09	□□□□□ -1.91
VTA1	YLR181C	YKE4	P40544	346 aa		3.09	□□□□□ -1.91
VTA1	YLR181C	DIE2	P50076	525 aa		3.09	□□□□□ -1.91
VTA1	YLR181C	LSM7	P53905	115 aa	Known RBP	3.09	□□□□□ -1.91
VTA1	YLR181C	PET191	Q02772	108 aa		3.09	□□□□□ -1.91
VTA1	YLR181C	YFR010W-A	P0C5N0	62 aa		3.08	□□□□□ -1.92
VTA1	YLR181C	PET54	P10834	293 aa		3.08	□□□□□ -1.92
VTA1	YLR181C	GRX2	P17695	143 aa	Known RBP	3.08	□□□□□ -1.92
VTA1	YLR181C	YCR102C	P25608	368 aa		3.08	□□□□□ -1.92
VTA1	YLR181C	ERG24	P32462	438 aa	Known RBP	3.08	□□□□□ -1.92
VTA1	YLR181C	SFK1	P35735	353 aa		3.08	□□□□□ -1.92
VTA1	YLR181C	YKL075C	P36083	450 aa		3.08	□□□□□ -1.92
VTA1	YLR181C	COS8	P38723	381 aa		3.08	□□□□□ -1.92
VTA1	YLR181C	MNN5	P46982	586 aa		3.08	□□□□□ -1.92
VTA1	YLR181C	CCC1	P47818	322 aa		3.08	□□□□□ -1.92
VTA1	YLR181C	YNL046W	P53956	172 aa		3.08	□□□□□ -1.92
VTA1	YLR181C	NMA1	Q06178	401 aa	Known RBP	3.08	□□□□□ -1.92
VTA1	YLR181C	MDM32	Q12171	622 aa		3.08	□□□□□ -1.92
VTA1	YLR181C	ATG22	P25568	528 aa		3.07	□□□□□ -1.92
VTA1	YLR181C	CLG1	P35190	452 aa		3.07	□□□□□ -1.92
VTA1	YLR181C	MSA2	P36157	363 aa		3.07	□□□□□ -1.92
VTA1	YLR181C	RFC4	P40339	323 aa	Known RBP	3.07	□□□□□ -1.92
VTA1	YLR181C	TIR3	P40552	269 aa		3.07	□□□□□ -1.92
VTA1	YLR181C	MRPL49	P40858	161 aa	Predicted RBP	3.07	□□□□□ -1.92
VTA1	YLR181C	CAT5	P41735	233 aa		3.07	□□□□□ -1.92
VTA1	YLR181C	AIM25	P47140	327 aa		3.07	□□□□□ -1.92
VTA1	YLR181C	YGL204C	P53089	101 aa		3.07	□□□□□ -1.92
VTA1	YLR181C	AIM36	Q03798	255 aa		3.07	□□□□□ -1.92
VTA1	YLR181C	YDR102C	Q03864	110 aa		3.07	□□□□□ -1.92
VTA1	YLR181C	YLR283W	Q05867	314 aa		3.07	□□□□□ -1.92
VTA1	YLR181C	NIP7	Q08962	181 aa	Known RBP	3.07	□□□□□ -1.92
VTA1	YLR181C	YOR032W-A	Q8TGS1	66 aa		3.07	□□□□□ -1.92
VTA1	YLR181C	SPS2	P08459	502 aa		3.06	□□□□□ -1.92
VTA1	YLR181C	CYR1	P08678	2026 aa	Known RBP	3.06	□□□□□ -1.92
VTA1	YLR181C	RPL40A	P0CH08	128 aa	Known RBP	3.06	□□□□□ -1.92
VTA1	YLR181C	RPL40B	P0CH09	128 aa	Known RBP	3.06	□□□□□ -1.92
VTA1	YLR181C	MATALPHA1	P0CY06	175 aa		3.06	□□□□□ -1.92
VTA1	YLR181C	HMLALPHA1	P0CY07	175 aa		3.06	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 50.3 ms