RNA–Protein interactions for RNA: YKR014C

YPT52, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene YPT52, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT52YKR014C VTH2P40890 1549 aa1.54□□□□□ -2.16
YPT52YKR014C RPA190P10964 1664 aaKnown RBP1.54□□□□□ -2.16
YPT52YKR014C MLP2P40457 1679 aa1.54□□□□□ -2.16
YPT52YKR014C TY1B-HO13535 1793 aa1.54□□□□□ -2.16
YPT52YKR014C TY1B-DR5P0C2I2 1755 aa1.54□□□□□ -2.16
YPT52YKR014C TY1B-DR6P0C2I3 1755 aa1.54□□□□□ -2.16
YPT52YKR014C TY1B-LR2P0C2I5 1755 aa1.54□□□□□ -2.16
YPT52YKR014C TY1B-LR3P0C2I6 1755 aaKnown RBP1.54□□□□□ -2.16
YPT52YKR014C TY1B-PR1P0C2I9 1755 aaKnown RBP1.54□□□□□ -2.16
YPT52YKR014C TY1B-PR2P0C2J0 1756 aa1.54□□□□□ -2.16
YPT52YKR014C TY1B-PR3P0C2J1 1755 aaKnown RBP1.54□□□□□ -2.16
YPT52YKR014C TY1B-JR1P47098 1755 aa1.54□□□□□ -2.16
YPT52YKR014C TY1B-ML2Q03434 1755 aaKnown RBP1.54□□□□□ -2.16
YPT52YKR014C TY1B-ER1Q03612 1755 aa1.54□□□□□ -2.16
YPT52YKR014C TY1B-ML1Q04711 1755 aaKnown RBP1.54□□□□□ -2.16
YPT52YKR014C TY1B-BRQ12193 1756 aa1.54□□□□□ -2.16
YPT52YKR014C TY1B-GR2Q12269 1755 aa1.54□□□□□ -2.16
YPT52YKR014C TY1B-OLQ12273 1755 aa1.54□□□□□ -2.16
YPT52YKR014C TY1B-GR3Q12316 1755 aa1.54□□□□□ -2.16
YPT52YKR014C TY1B-PLQ12414 1755 aaKnown RBP1.54□□□□□ -2.16
YPT52YKR014C TY1B-ORQ92393 1755 aa1.54□□□□□ -2.16
YPT52YKR014C RPO21P04050 1733 aaKnown RBP1.53□□□□□ -2.16
YPT52YKR014C YKL102CP34249 101 aa1.53□□□□□ -2.16
YPT52YKR014C ECM4P36156 370 aa1.53□□□□□ -2.16
YPT52YKR014C STU1P38198 1513 aa1.53□□□□□ -2.16
YPT52YKR014C NSG1P38837 291 aa1.53□□□□□ -2.16
YPT52YKR014C YFL019CP43576 117 aa1.53□□□□□ -2.16
YPT52YKR014C KNH1P50112 268 aa1.53□□□□□ -2.16
YPT52YKR014C GPI17Q04080 534 aa1.53□□□□□ -2.16
YPT52YKR014C NAT3Q06504 195 aa1.53□□□□□ -2.16
YPT52YKR014C RAD28Q12021 506 aa1.53□□□□□ -2.16
YPT52YKR014C YLR050CQ12155 161 aaKnown RBP1.53□□□□□ -2.16
YPT52YKR014C GEA2P39993 1459 aaKnown RBP1.52□□□□□ -2.17
YPT52YKR014C MMS22Q06164 1454 aa1.52□□□□□ -2.17
YPT52YKR014C SPP41P38904 1435 aa1.52□□□□□ -2.17
YPT52YKR014C NSP1P14907 823 aaKnown RBP1.52□□□□□ -2.17
YPT52YKR014C TMA19P35691 167 aaKnown RBP1.52□□□□□ -2.17
YPT52YKR014C YBR219CP38317 127 aa1.52□□□□□ -2.17
YPT52YKR014C YER135CP40082 130 aa1.52□□□□□ -2.17
YPT52YKR014C GPI14P47088 403 aaKnown RBP1.52□□□□□ -2.17
YPT52YKR014C POP3P53833 195 aaPredicted RBP1.52□□□□□ -2.17
YPT52YKR014C YNL140CP53910 189 aa1.52□□□□□ -2.17
YPT52YKR014C VPS71Q03433 280 aa1.52□□□□□ -2.17
YPT52YKR014C SPO14P36126 1683 aa1.51□□□□□ -2.17
YPT52YKR014C VPS15P22219 1454 aa1.51□□□□□ -2.17
YPT52YKR014C LTE1P07866 1435 aa1.51□□□□□ -2.17
YPT52YKR014C TRM732Q03496 1420 aa1.51□□□□□ -2.17
YPT52YKR014C SEC11P15367 167 aa1.51□□□□□ -2.17
YPT52YKR014C RME1P32338 300 aaKnown RBP1.51□□□□□ -2.17
YPT52YKR014C YKR045CP36138 183 aa1.51□□□□□ -2.17
YPT52YKR014C TVP38P36164 337 aa1.51□□□□□ -2.17
YPT52YKR014C VMA22P38784 181 aa1.51□□□□□ -2.17
YPT52YKR014C CUP9P41817 306 aa1.51□□□□□ -2.17
YPT52YKR014C PLP1Q04004 230 aa1.51□□□□□ -2.17
YPT52YKR014C IRC23Q08416 157 aa1.51□□□□□ -2.17
YPT52YKR014C DGK1Q12382 290 aa1.51□□□□□ -2.17
YPT52YKR014C YLR412C-AQ3E742 68 aa1.51□□□□□ -2.17
YPT52YKR014C TY1B-JR2P47100 1755 aaKnown RBP1.51□□□□□ -2.17
YPT52YKR014C TY1B-ER2Q03619 1755 aa1.51□□□□□ -2.17
YPT52YKR014C TY1B-MR1Q04214 1755 aa1.51□□□□□ -2.17
YPT52YKR014C TY1B-MR2Q04670 1755 aaKnown RBP1.51□□□□□ -2.17
YPT52YKR014C TY1B-LR1Q12088 1755 aaKnown RBP1.51□□□□□ -2.17
YPT52YKR014C TY1B-NL1Q12112 1755 aa1.51□□□□□ -2.17
YPT52YKR014C TY1B-GR1Q12141 1755 aa1.51□□□□□ -2.17
YPT52YKR014C TY1B-BLQ12490 1755 aa1.51□□□□□ -2.17
YPT52YKR014C TSC11P40061 1430 aa1.5□□□□□ -2.17
YPT52YKR014C CMD1P06787 147 aaKnown RBP1.5□□□□□ -2.17
YPT52YKR014C TIR1P10863 254 aa1.5□□□□□ -2.17
YPT52YKR014C PAM17P36147 197 aa1.5□□□□□ -2.17
YPT52YKR014C SPC25P40014 221 aa1.5□□□□□ -2.17
YPT52YKR014C YER121WP40076 114 aa1.5□□□□□ -2.17
YPT52YKR014C RFC2P40348 353 aa1.5□□□□□ -2.17
YPT52YKR014C SHH3Q04487 196 aa1.5□□□□□ -2.17
YPT52YKR014C YLR162WQ06235 118 aa1.5□□□□□ -2.17
YPT52YKR014C CHC1P22137 1653 aaKnown RBP1.5□□□□□ -2.17
YPT52YKR014C DOP1Q03921 1698 aa1.5□□□□□ -2.17
YPT52YKR014C ULS1Q08562 1619 aa1.5□□□□□ -2.17
YPT52YKR014C SNQ2P32568 1501 aaKnown RBP1.5□□□□□ -2.17
YPT52YKR014C NUP159P40477 1460 aa1.5□□□□□ -2.17
YPT52YKR014C TRM3Q07527 1436 aa1.49□□□□□ -2.17
YPT52YKR014C QCR2P07257 368 aa1.49□□□□□ -2.17
YPT52YKR014C FES1P38260 290 aa1.49□□□□□ -2.17
YPT52YKR014C YPL073CP40323 161 aa1.49□□□□□ -2.17
YPT52YKR014C DIG2Q03373 323 aaKnown RBP1.49□□□□□ -2.17
YPT52YKR014C YMR253CQ04835 414 aa1.49□□□□□ -2.17
YPT52YKR014C YPR174CQ06616 221 aaPredicted RBP1.49□□□□□ -2.17
YPT52YKR014C YDL180WQ12301 547 aa1.49□□□□□ -2.17
YPT52YKR014C IRC20Q06554 1556 aa1.49□□□□□ -2.17
YPT52YKR014C NUP170P38181 1502 aa1.49□□□□□ -2.17
YPT52YKR014C PDR12Q02785 1511 aa1.49□□□□□ -2.17
YPT52YKR014C PDR15Q04182 1529 aaKnown RBP1.49□□□□□ -2.17
YPT52YKR014C GDB1Q06625 1536 aa1.49□□□□□ -2.17
YPT52YKR014C BUD3P25558 1636 aa1.48□□□□□ -2.17
YPT52YKR014C FAS1P07149 2051 aaKnown RBP1.48□□□□□ -2.17
YPT52YKR014C PHO85P17157 305 aa1.48□□□□□ -2.17
YPT52YKR014C YNL033WP53964 284 aa1.48□□□□□ -2.17
YPT52YKR014C CSI2Q08054 341 aa1.48□□□□□ -2.17
YPT52YKR014C YBT1P32386 1661 aa1.48□□□□□ -2.17
YPT52YKR014C DNF2Q12675 1612 aa1.48□□□□□ -2.17
YPT52YKR014C CYR1P08678 2026 aaKnown RBP1.47□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms