RNA–Protein interactions for RNA: YKL213C

DOA1, Transcript of WD repeat protein required for ubiquitin-mediated protein degradation, yeast

Gene DOA1, Length 2,148 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOA1	YKL213C	PTH1	P38876	190 aa	Known RBP	4.21	□□□□□ -1.74
DOA1	YKL213C	VHS2	P40463	436 aa		4.21	□□□□□ -1.74
DOA1	YKL213C	YIL012W	P40551	113 aa		4.21	□□□□□ -1.74
DOA1	YKL213C	YJL218W	P40892	196 aa	Known RBP	4.21	□□□□□ -1.74
DOA1	YKL213C	ALG13	P53178	202 aa		4.21	□□□□□ -1.74
DOA1	YKL213C	TRI1	Q05024	226 aa		4.21	□□□□□ -1.74
DOA1	YKL213C	RAF1	Q06891	181 aa		4.21	□□□□□ -1.74
DOA1	YKL213C	PRR2	Q12310	699 aa		4.21	□□□□□ -1.74
DOA1	YKL213C	RPL18A	P0CX49	186 aa	Known RBP	4.21	□□□□□ -1.74
DOA1	YKL213C	RPL18B	P0CX50	186 aa	Known RBP	4.21	□□□□□ -1.74
DOA1	YKL213C	TY1A-OR	P0CX59	440 aa		4.21	□□□□□ -1.74
DOA1	YKL213C	TY1A-PR2	P0CX60	440 aa		4.21	□□□□□ -1.74
DOA1	YKL213C	CAP2	P13517	287 aa		4.21	□□□□□ -1.74
DOA1	YKL213C	PMU1	P36069	295 aa		4.21	□□□□□ -1.74
DOA1	YKL213C	GPX2	P38143	162 aa		4.21	□□□□□ -1.74
DOA1	YKL213C	YGP1	P38616	354 aa	Known RBP	4.21	□□□□□ -1.74
DOA1	YKL213C	MTC6	P38849	526 aa		4.21	□□□□□ -1.74
DOA1	YKL213C	GLE2	P40066	365 aa		4.21	□□□□□ -1.74
DOA1	YKL213C	PAM16	P42949	149 aa		4.21	□□□□□ -1.74
DOA1	YKL213C	YJR015W	P47090	510 aa		4.21	□□□□□ -1.74
DOA1	YKL213C	BUL1	P48524	976 aa		4.21	□□□□□ -1.74
DOA1	YKL213C	NRG1	Q03125	231 aa		4.21	□□□□□ -1.74
DOA1	YKL213C	UPS3	Q04006	179 aa		4.21	□□□□□ -1.74
DOA1	YKL213C	YMR252C	Q04814	134 aa		4.21	□□□□□ -1.74
DOA1	YKL213C	RPL28	P02406	149 aa	Known RBP	4.2	□□□□□ -1.74
DOA1	YKL213C	SIR2	P06700	562 aa		4.2	□□□□□ -1.74
DOA1	YKL213C	COX9	P07255	59 aa		4.2	□□□□□ -1.74
DOA1	YKL213C	ATG15	P25641	520 aa		4.2	□□□□□ -1.74
DOA1	YKL213C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
DOA1	YKL213C	LSM2	P38203	95 aa	Known RBP	4.2	□□□□□ -1.74
DOA1	YKL213C	YBR096W	P38256	230 aa		4.2	□□□□□ -1.74
DOA1	YKL213C	RPL14B	P38754	138 aa	Known RBP	4.2	□□□□□ -1.74
DOA1	YKL213C	MTM1	P53320	366 aa		4.2	□□□□□ -1.74
DOA1	YKL213C	YNL165W	P53891	406 aa		4.2	□□□□□ -1.74
DOA1	YKL213C	CRZ1	P53968	678 aa		4.2	□□□□□ -1.74
DOA1	YKL213C	CUE4	Q04201	117 aa	Predicted RBP	4.2	□□□□□ -1.74
DOA1	YKL213C	ISU2	Q12056	156 aa		4.2	□□□□□ -1.74
DOA1	YKL213C	YLR118C	Q12354	227 aa		4.2	□□□□□ -1.74
DOA1	YKL213C	HEM4	P06174	275 aa		4.19	□□□□□ -1.74
DOA1	YKL213C	BGL2	P15703	313 aa	Known RBP	4.19	□□□□□ -1.74
DOA1	YKL213C	PHO85	P17157	305 aa		4.19	□□□□□ -1.74
DOA1	YKL213C	HYP2	P23301	157 aa	Known RBP	4.19	□□□□□ -1.74
DOA1	YKL213C	YCL042W	P25572	119 aa		4.19	□□□□□ -1.74
DOA1	YKL213C	YKR041W	P36134	250 aa		4.19	□□□□□ -1.74
DOA1	YKL213C	YBR090C	P38253	122 aa		4.19	□□□□□ -1.74
DOA1	YKL213C	YHK8	P38776	514 aa		4.19	□□□□□ -1.74
DOA1	YKL213C	MTL1	P53214	551 aa		4.19	□□□□□ -1.74
DOA1	YKL213C	CPR8	P53728	308 aa		4.19	□□□□□ -1.74
DOA1	YKL213C	AIM11	P87275	137 aa		4.19	□□□□□ -1.74
DOA1	YKL213C	YMR320W	Q04897	101 aa		4.19	□□□□□ -1.74
DOA1	YKL213C	ATG5	Q12380	294 aa		4.19	□□□□□ -1.74
DOA1	YKL213C	LAS17	Q12446	633 aa		4.19	□□□□□ -1.74
DOA1	YKL213C	ISD11	Q6Q560	94 aa		4.19	□□□□□ -1.74
DOA1	YKL213C	UBI4	P0CG63	381 aa	Known RBP	4.19	□□□□□ -1.74
DOA1	YKL213C	ANB1	P19211	157 aa		4.19	□□□□□ -1.74
DOA1	YKL213C	MAK32	P23060	363 aa		4.19	□□□□□ -1.74
DOA1	YKL213C	EMP24	P32803	203 aa	Known RBP	4.19	□□□□□ -1.74
DOA1	YKL213C	SFK1	P35735	353 aa		4.19	□□□□□ -1.74
DOA1	YKL213C	YIP4	P53093	235 aa		4.19	□□□□□ -1.74
DOA1	YKL213C	TY1A-DR2	Q03964	440 aa	Known RBP	4.19	□□□□□ -1.74
DOA1	YKL213C	LRS4	Q04087	347 aa	Known RBP	4.19	□□□□□ -1.74
DOA1	YKL213C	MCT1	Q12283	360 aa		4.19	□□□□□ -1.74
DOA1	YKL213C	FEN2	P25621	512 aa	Known RBP	4.18	□□□□□ -1.74
DOA1	YKL213C	PAU2	P32612	120 aa		4.18	□□□□□ -1.74
DOA1	YKL213C	SDS24	P38314	527 aa		4.18	□□□□□ -1.74
DOA1	YKL213C	CUE1	P38428	203 aa		4.18	□□□□□ -1.74
DOA1	YKL213C	RPL13B	P40212	199 aa	Known RBP	4.18	□□□□□ -1.74
DOA1	YKL213C	YIL024C	P40543	189 aa		4.18	□□□□□ -1.74
DOA1	YKL213C	UBC11	P52492	156 aa		4.18	□□□□□ -1.74
DOA1	YKL213C	RCE1	Q03530	315 aa		4.18	□□□□□ -1.74
DOA1	YKL213C	MSS11	Q03825	758 aa		4.18	□□□□□ -1.74
DOA1	YKL213C	YDR415C	Q04033	374 aa	Predicted RBP	4.18	□□□□□ -1.74
DOA1	YKL213C	IZH2	Q12442	317 aa		4.18	□□□□□ -1.74
DOA1	YKL213C	PBI2	P0CT04	75 aa	Known RBP	4.18	□□□□□ -1.74
DOA1	YKL213C	ERG4	P25340	473 aa		4.18	□□□□□ -1.74
DOA1	YKL213C	VMA3	P25515	160 aa		4.18	□□□□□ -1.74
DOA1	YKL213C	YMR144W	P40214	342 aa	Known RBP	4.18	□□□□□ -1.74
DOA1	YKL213C	AIR1	P40507	360 aa	Known RBP	4.18	□□□□□ -1.74
DOA1	YKL213C	YLR152C	P54072	576 aa		4.18	□□□□□ -1.74
DOA1	YKL213C	YLR224W	Q05947	369 aa		4.18	□□□□□ -1.74
DOA1	YKL213C	NMA1	Q06178	401 aa	Known RBP	4.18	□□□□□ -1.74
DOA1	YKL213C	TDA6	Q06466	467 aa		4.18	□□□□□ -1.74
DOA1	YKL213C	TIR4	Q12218	487 aa	Predicted RBP	4.18	□□□□□ -1.74
DOA1	YKL213C	PAI3	P01094	68 aa		4.17	□□□□□ -1.74
DOA1	YKL213C	CHO1	P08456	276 aa		4.17	□□□□□ -1.74
DOA1	YKL213C	YPR170W-B	P0C5R9	85 aa		4.17	□□□□□ -1.74
DOA1	YKL213C	NTF2	P33331	125 aa	Known RBP	4.17	□□□□□ -1.74
DOA1	YKL213C	MRPS5	P33759	307 aa		4.17	□□□□□ -1.74
DOA1	YKL213C	SPC25	P40014	221 aa		4.17	□□□□□ -1.74
DOA1	YKL213C	YER084W	P40057	128 aa		4.17	□□□□□ -1.74
DOA1	YKL213C	YER188W	P40103	239 aa		4.17	□□□□□ -1.74
DOA1	YKL213C	SWM2	P40342	146 aa		4.17	□□□□□ -1.74
DOA1	YKL213C	DLS1	P40366	167 aa		4.17	□□□□□ -1.74
DOA1	YKL213C	MOB2	P43563	287 aa		4.17	□□□□□ -1.74
DOA1	YKL213C	ATG18	P43601	500 aa		4.17	□□□□□ -1.74
DOA1	YKL213C	YNR048W	P53740	393 aa		4.17	□□□□□ -1.74
DOA1	YKL213C	YNR071C	P53757	342 aa		4.17	□□□□□ -1.74
DOA1	YKL213C	GPI15	P53961	229 aa		4.17	□□□□□ -1.74
DOA1	YKL213C	COF1	Q03048	143 aa	Known RBP	4.17	□□□□□ -1.74
DOA1	YKL213C	MRX11	Q03079	207 aa		4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 31.7 ms