RNA–Protein interactions for RNA: YKL011C

CCE1, Transcript of Mitochondrial cruciform cutting endonuclease, yeastyeast

Gene CCE1, Length 1,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCE1YKL011C TRR1P29509 319 aaKnown RBP1.56□□□□□ -2.16
CCE1YKL011C EDC3P39998 551 aaKnown RBP1.56□□□□□ -2.16
CCE1YKL011C NSA2P40078 261 aaKnown RBP1.56□□□□□ -2.16
CCE1YKL011C HYR1P40581 163 aaKnown RBP1.56□□□□□ -2.16
CCE1YKL011C YFH7P43591 353 aa1.56□□□□□ -2.16
CCE1YKL011C SBH1P52870 82 aa1.56□□□□□ -2.16
CCE1YKL011C CWC27Q02770 301 aa1.56□□□□□ -2.16
CCE1YKL011C DGK1Q12382 290 aa1.56□□□□□ -2.16
CCE1YKL011C ARO7P32178 256 aa1.55□□□□□ -2.16
CCE1YKL011C GSP2P32836 220 aaKnown RBP1.55□□□□□ -2.16
CCE1YKL011C JAC1P53193 184 aa1.55□□□□□ -2.16
CCE1YKL011C ATP20Q12233 115 aa1.55□□□□□ -2.16
CCE1YKL011C SAC3P46674 1301 aa1.55□□□□□ -2.16
CCE1YKL011C SFK1P35735 353 aa1.54□□□□□ -2.16
CCE1YKL011C YHL042WP38729 150 aa1.54□□□□□ -2.16
CCE1YKL011C RFC2P40348 353 aa1.54□□□□□ -2.16
CCE1YKL011C YLR460CP54007 376 aa1.54□□□□□ -2.16
CCE1YKL011C HPT1Q04178 221 aaKnown RBP1.54□□□□□ -2.16
CCE1YKL011C YMR252CQ04814 134 aa1.54□□□□□ -2.16
CCE1YKL011C AQY2P0CD90 149 aa1.53□□□□□ -2.16
CCE1YKL011C STP22P25604 385 aa1.53□□□□□ -2.16
CCE1YKL011C CPR5P35176 225 aa1.53□□□□□ -2.16
CCE1YKL011C MAK5P38112 773 aaPredicted RBP1.53□□□□□ -2.16
CCE1YKL011C SRP14P38985 146 aa1.53□□□□□ -2.16
CCE1YKL011C HPA3P39979 161 aa1.53□□□□□ -2.16
CCE1YKL011C GAL83Q04739 417 aa1.53□□□□□ -2.16
CCE1YKL011C DAS2Q12084 232 aa1.53□□□□□ -2.16
CCE1YKL011C PEX11Q12462 236 aa1.53□□□□□ -2.16
CCE1YKL011C VAR1P02381 398 aa1.52□□□□□ -2.17
CCE1YKL011C RPB7P34087 171 aa1.52□□□□□ -2.17
CCE1YKL011C RRT1P38192 103 aa1.52□□□□□ -2.17
CCE1YKL011C YFL065CP43539 102 aa1.52□□□□□ -2.17
CCE1YKL011C ALB1P47019 175 aaPredicted RBP1.52□□□□□ -2.17
CCE1YKL011C SOL1P50278 321 aa1.52□□□□□ -2.17
CCE1YKL011C YLR422WQ06409 1932 aa1.52□□□□□ -2.17
CCE1YKL011C RPL35AP0CX84 120 aaKnown RBP1.51□□□□□ -2.17
CCE1YKL011C RPL35BP0CX85 120 aaKnown RBP1.51□□□□□ -2.17
CCE1YKL011C YCR023CP25351 611 aa1.51□□□□□ -2.17
CCE1YKL011C YEL008WP40001 126 aa1.51□□□□□ -2.17
CCE1YKL011C PIR1Q03178 341 aa1.51□□□□□ -2.17
CCE1YKL011C PST2Q12335 198 aaKnown RBP1.51□□□□□ -2.17
CCE1YKL011C RAD51P25454 400 aa1.5□□□□□ -2.17
CCE1YKL011C FYV4P38783 130 aaPredicted RBP1.5□□□□□ -2.17
CCE1YKL011C TTI2P47168 421 aa1.5□□□□□ -2.17
CCE1YKL011C UPS3Q04006 179 aa1.5□□□□□ -2.17
CCE1YKL011C RRP17Q04031 235 aaPredicted RBP1.5□□□□□ -2.17
CCE1YKL011C GIM5Q04493 163 aa1.5□□□□□ -2.17
CCE1YKL011C YOR015WQ12169 119 aa1.5□□□□□ -2.17
CCE1YKL011C YCL042WP25572 119 aa1.49□□□□□ -2.17
CCE1YKL011C YEL067CP39978 195 aa1.49□□□□□ -2.17
CCE1YKL011C YNL200CP40165 246 aaKnown RBP1.49□□□□□ -2.17
CCE1YKL011C SOK1P40317 901 aa1.49□□□□□ -2.17
CCE1YKL011C YNL140CP53910 189 aa1.49□□□□□ -2.17
CCE1YKL011C VPS28Q02767 242 aa1.49□□□□□ -2.17
CCE1YKL011C YOR214CQ12282 236 aa1.49□□□□□ -2.17
CCE1YKL011C YHR212W-AP0CX91 67 aa1.48□□□□□ -2.17
CCE1YKL011C HSP30P25619 332 aa1.48□□□□□ -2.17
CCE1YKL011C YLR050CQ12155 161 aaKnown RBP1.48□□□□□ -2.17
CCE1YKL011C STF2P16965 84 aa1.47□□□□□ -2.17
CCE1YKL011C NSE4P43124 402 aa1.47□□□□□ -2.17
CCE1YKL011C TIM13P53299 105 aa1.47□□□□□ -2.17
CCE1YKL011C YKR005CQ02203 525 aa1.47□□□□□ -2.17
CCE1YKL011C PLP1Q04004 230 aa1.47□□□□□ -2.17
CCE1YKL011C UPS1Q05776 175 aa1.47□□□□□ -2.17
CCE1YKL011C YPR127WQ06494 345 aa1.47□□□□□ -2.17
CCE1YKL011C CSH1P38287 376 aa1.46□□□□□ -2.18
CCE1YKL011C MPM1P40364 252 aa1.46□□□□□ -2.18
CCE1YKL011C YGL235WP53071 178 aa1.46□□□□□ -2.18
CCE1YKL011C GRX5Q02784 150 aa1.46□□□□□ -2.18
CCE1YKL011C DML1Q03652 475 aa1.46□□□□□ -2.18
CCE1YKL011C YHP1Q04116 353 aa1.46□□□□□ -2.18
CCE1YKL011C ATG41Q12048 136 aa1.46□□□□□ -2.18
CCE1YKL011C COA3Q3E7B2 85 aa1.46□□□□□ -2.18
CCE1YKL011C SEN2P16658 377 aa1.45□□□□□ -2.18
CCE1YKL011C XPT1P47165 209 aa1.45□□□□□ -2.18
CCE1YKL011C MET31Q03081 177 aa1.45□□□□□ -2.18
CCE1YKL011C RIM9Q04734 239 aa1.45□□□□□ -2.18
CCE1YKL011C YOR381W-AQ3E804 55 aa1.45□□□□□ -2.18
CCE1YKL011C CMD1P06787 147 aaKnown RBP1.44□□□□□ -2.18
CCE1YKL011C VPS51P36116 164 aa1.44□□□□□ -2.18
CCE1YKL011C HSK3P69852 69 aa1.44□□□□□ -2.18
CCE1YKL011C RAD6P06104 172 aa1.43□□□□□ -2.18
CCE1YKL011C YER121WP40076 114 aa1.43□□□□□ -2.18
CCE1YKL011C ELP6Q04868 273 aa1.43□□□□□ -2.18
CCE1YKL011C CMC2Q3E7A4 109 aa1.43□□□□□ -2.18
CCE1YKL011C MAK31P23059 88 aa1.42□□□□□ -2.18
CCE1YKL011C YBL010CP32788 280 aa1.42□□□□□ -2.18
CCE1YKL011C TLG1Q03322 224 aa1.42□□□□□ -2.18
CCE1YKL011C THI74Q04083 370 aa1.42□□□□□ -2.18
CCE1YKL011C TAR1Q8TGM6 124 aa1.42□□□□□ -2.18
CCE1YKL011C NUF2P33895 451 aa1.41□□□□□ -2.18
CCE1YKL011C YRA2P36036 203 aaKnown RBP RIP-Chip data1.41□□□□□ -2.18not detected
CCE1YKL011C CCS1P40202 249 aaKnown RBP1.41□□□□□ -2.18
CCE1YKL011C GLR1P41921 483 aaKnown RBP1.41□□□□□ -2.18
CCE1YKL011C YMR030W-AQ3E760 96 aa1.41□□□□□ -2.18
CCE1YKL011C TRM3Q07527 1436 aa1.4□□□□□ -2.18
CCE1YKL011C ETR1P38071 380 aa1.4□□□□□ -2.19
CCE1YKL011C YEL073CP39974 107 aa1.4□□□□□ -2.19
CCE1YKL011C YEL028WP39989 153 aa1.4□□□□□ -2.19
CCE1YKL011C SBH2P52871 88 aa1.4□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 39.7 ms