RNA–Protein interactions for RNA: YHR108W

GGA2, Transcript of Protein that regulates Arf1p, Arf2p to facilitate Golgi trafficking, yeastyeast

Gene GGA2, Length 1,758 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GGA2YHR108W IRA2P19158 3079 aa6.86□□□□□ -1.31
GGA2YHR108W SPS18P32572 300 aa6.86□□□□□ -1.31
GGA2YHR108W ATP3P38077 311 aaKnown RBP6.86□□□□□ -1.31
GGA2YHR108W DER1P38307 211 aa6.86□□□□□ -1.31
GGA2YHR108W YJR015WP47090 510 aa6.86□□□□□ -1.31
GGA2YHR108W YGL114WP53134 725 aa6.86□□□□□ -1.31
GGA2YHR108W CGR1P53188 120 aa6.86□□□□□ -1.31
GGA2YHR108W YNL046WP53956 172 aa6.86□□□□□ -1.31
GGA2YHR108W YTH1Q06102 208 aaPredicted RBP6.86□□□□□ -1.31
GGA2YHR108W RAX2Q12465 1220 aa6.86□□□□□ -1.31
GGA2YHR108W YMR105W-AQ8TGS8 64 aa6.86□□□□□ -1.31
GGA2YHR108W IRA1P18963 3092 aa6.85□□□□□ -1.31
GGA2YHR108W AFR1P33304 620 aa6.85□□□□□ -1.31
GGA2YHR108W YNK1P36010 153 aaKnown RBP6.85□□□□□ -1.31
GGA2YHR108W YBR184WP38299 523 aa6.85□□□□□ -1.31
GGA2YHR108W YER121WP40076 114 aa6.85□□□□□ -1.31
GGA2YHR108W YJL118WP47022 219 aa6.85□□□□□ -1.31
GGA2YHR108W MIC27P50945 234 aa6.85□□□□□ -1.31
GGA2YHR108W ATC1Q04005 294 aa6.85□□□□□ -1.31
GGA2YHR108W RPS22AP0C0W1 130 aaKnown RBP6.85□□□□□ -1.31
GGA2YHR108W COQ3P27680 312 aa6.85□□□□□ -1.31
GGA2YHR108W SSU72P53538 206 aaPredicted RBP6.85□□□□□ -1.31
GGA2YHR108W DAD3P69850 94 aa6.85□□□□□ -1.31
GGA2YHR108W SHH3Q04487 196 aa6.85□□□□□ -1.31
GGA2YHR108W POM34Q12445 299 aa6.85□□□□□ -1.31
GGA2YHR108W NHP6AP11632 93 aaKnown RBP6.84□□□□□ -1.31
GGA2YHR108W DAL80P26343 269 aa6.84□□□□□ -1.31
GGA2YHR108W TCA17P32613 152 aa6.84□□□□□ -1.31
GGA2YHR108W SUR2P38992 349 aa6.84□□□□□ -1.31
GGA2YHR108W PAU5P43575 122 aa6.84□□□□□ -1.31
GGA2YHR108W YOR029WQ12243 111 aa6.84□□□□□ -1.31
GGA2YHR108W YOP1Q12402 180 aa6.84□□□□□ -1.31
GGA2YHR108W MRS3P10566 314 aa6.83□□□□□ -1.32
GGA2YHR108W NOP1P15646 327 aaKnown RBP6.83□□□□□ -1.32
GGA2YHR108W HMX1P32339 317 aa6.83□□□□□ -1.32
GGA2YHR108W PTC7P38797 343 aa6.83□□□□□ -1.32
GGA2YHR108W TIF11P38912 153 aaKnown RBP6.83□□□□□ -1.32
GGA2YHR108W TAX4P47030 604 aa6.83□□□□□ -1.32
GGA2YHR108W APS2Q00381 147 aa6.83□□□□□ -1.32
GGA2YHR108W LOA1Q06508 300 aa6.83□□□□□ -1.32
GGA2YHR108W PAU19P0CE85 124 aa6.82□□□□□ -1.32
GGA2YHR108W PAU21P0CE86 164 aa6.82□□□□□ -1.32
GGA2YHR108W PAU22P0CE87 164 aa6.82□□□□□ -1.32
GGA2YHR108W TOM40P23644 387 aaKnown RBP6.82□□□□□ -1.32
GGA2YHR108W PAU3P25610 124 aa6.82□□□□□ -1.32
GGA2YHR108W SPC29P33419 253 aa6.82□□□□□ -1.32
GGA2YHR108W IMD2P38697 523 aaKnown RBP6.82□□□□□ -1.32
GGA2YHR108W ECM14P38836 430 aa6.82□□□□□ -1.32
GGA2YHR108W GET2P40056 285 aa6.82□□□□□ -1.32
GGA2YHR108W SGN1P40561 250 aaKnown RBP RIP-Chip data6.82□□□□□ -1.32not detected
GGA2YHR108W ATG27P46989 271 aa6.82□□□□□ -1.32
GGA2YHR108W CRH1P53301 507 aa6.82□□□□□ -1.32
GGA2YHR108W ARL3Q02804 198 aa6.82□□□□□ -1.32
GGA2YHR108W FRS1P15624 595 aaKnown RBP6.82□□□□□ -1.32
GGA2YHR108W RPS0AP32905 252 aaKnown RBP6.82□□□□□ -1.32
GGA2YHR108W SSS1P35179 80 aa6.82□□□□□ -1.32
GGA2YHR108W YGP1P38616 354 aaKnown RBP6.82□□□□□ -1.32
GGA2YHR108W CTR2P38865 189 aa6.82□□□□□ -1.32
GGA2YHR108W YFL015CP43578 164 aa6.82□□□□□ -1.32
GGA2YHR108W LST7P53237 242 aa6.82□□□□□ -1.32
GGA2YHR108W YDL009CQ12210 107 aa6.82□□□□□ -1.32
GGA2YHR108W FMP49A0A023PZB3 126 aa6.81□□□□□ -1.32
GGA2YHR108W HTB1P02293 131 aaKnown RBP6.81□□□□□ -1.32
GGA2YHR108W FPR2P32472 135 aa6.81□□□□□ -1.32
GGA2YHR108W CDS1P38221 457 aa6.81□□□□□ -1.32
GGA2YHR108W CYB5P40312 120 aa6.81□□□□□ -1.32
GGA2YHR108W SAS2P40963 338 aa6.81□□□□□ -1.32
GGA2YHR108W HIT1P46973 164 aa6.81□□□□□ -1.32
GGA2YHR108W LSM8P47093 109 aaKnown RBP6.81□□□□□ -1.32
GGA2YHR108W YNR064CP53750 290 aa6.81□□□□□ -1.32
GGA2YHR108W POS5Q06892 414 aa6.81□□□□□ -1.32
GGA2YHR108W YPR063CQ12160 140 aa6.81□□□□□ -1.32
GGA2YHR108W BGL2P15703 313 aaKnown RBP6.8□□□□□ -1.32
GGA2YHR108W GPI2P46961 280 aa6.8□□□□□ -1.32
GGA2YHR108W YHP1Q04116 353 aa6.8□□□□□ -1.32
GGA2YHR108W NAT3Q06504 195 aa6.8□□□□□ -1.32
GGA2YHR108W YMR316C-AI2HB70 103 aa6.8□□□□□ -1.32
GGA2YHR108W RPS2P25443 254 aaKnown RBP6.8□□□□□ -1.32
GGA2YHR108W PMU1P36069 295 aa6.8□□□□□ -1.32
GGA2YHR108W YAR068WP39564 161 aa6.8□□□□□ -1.32
GGA2YHR108W DSK2P48510 373 aa6.8□□□□□ -1.32
GGA2YHR108W PML1Q07930 204 aaPredicted RBP6.8□□□□□ -1.32
GGA2YHR108W LDS2Q08218 356 aa6.8□□□□□ -1.32
GGA2YHR108W PIS1P06197 220 aaKnown RBP6.79□□□□□ -1.32
GGA2YHR108W RNA15P25299 296 aaPredicted RBP6.79□□□□□ -1.32
GGA2YHR108W IRC22P40006 225 aa6.79□□□□□ -1.32
GGA2YHR108W YGL185CP53100 379 aa6.79□□□□□ -1.32
GGA2YHR108W IRC25Q07951 179 aa6.79□□□□□ -1.32
GGA2YHR108W WSC3Q12215 556 aa6.79□□□□□ -1.32
GGA2YHR108W DCN1Q12395 269 aa6.79□□□□□ -1.32
GGA2YHR108W PAA1Q12447 191 aaKnown RBP6.79□□□□□ -1.32
GGA2YHR108W DFR1P07807 211 aaKnown RBP RIP-Chip data6.78□□□□□ -1.32not detected
GGA2YHR108W RAD23P32628 398 aaKnown RBP6.78□□□□□ -1.32
GGA2YHR108W MRPL28P36527 147 aa6.78□□□□□ -1.32
GGA2YHR108W YPL108WQ02872 168 aaPredicted RBP6.78□□□□□ -1.32
GGA2YHR108W STP4Q07351 490 aa6.78□□□□□ -1.32
GGA2YHR108W MCH1Q07376 486 aa6.78□□□□□ -1.32
GGA2YHR108W MED7Q08278 222 aa6.78□□□□□ -1.32
GGA2YHR108W SMT3Q12306 101 aaKnown RBP6.78□□□□□ -1.32
GGA2YHR108W LAS17Q12446 633 aa6.78□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 24.5 ms