RNA–Protein interactions for RNA: YER094C

PUP3, Transcript of Beta 3 subunit of the 20S proteasome, yeastyeast

Gene PUP3, Length 618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP3YER094C CAF40P53829 373 aa6.34□□□□□ -1.39
PUP3YER094C YMR007WQ03675 126 aa6.34□□□□□ -1.39
PUP3YER094C RAD28Q12021 506 aa6.34□□□□□ -1.39
PUP3YER094C POM34Q12445 299 aa6.34□□□□□ -1.39
PUP3YER094C SOD1P00445 154 aaKnown RBP6.33□□□□□ -1.4
PUP3YER094C ILV5P06168 395 aaKnown RBP6.33□□□□□ -1.4
PUP3YER094C TOM40P23644 387 aaKnown RBP6.33□□□□□ -1.4
PUP3YER094C RPB9P27999 122 aa6.33□□□□□ -1.4
PUP3YER094C SUA7P29055 345 aaPredicted RBP6.33□□□□□ -1.4
PUP3YER094C YKR045CP36138 183 aa6.33□□□□□ -1.4
PUP3YER094C YBL071CP38185 102 aa6.33□□□□□ -1.4
PUP3YER094C DER1P38307 211 aa6.33□□□□□ -1.4
PUP3YER094C PTC7P38797 343 aa6.33□□□□□ -1.4
PUP3YER094C BOR1P53838 576 aa6.33□□□□□ -1.4
PUP3YER094C YMR166CQ03829 368 aa6.33□□□□□ -1.4
PUP3YER094C SHH3Q04487 196 aa6.33□□□□□ -1.4
PUP3YER094C POS5Q06892 414 aa6.33□□□□□ -1.4
PUP3YER094C RKI1Q12189 258 aa6.33□□□□□ -1.4
PUP3YER094C Q0142Q9ZZW4 58 aa6.33□□□□□ -1.4
PUP3YER094C MIA40P36046 403 aa6.32□□□□□ -1.4
PUP3YER094C RPL14AP36105 138 aaKnown RBP6.32□□□□□ -1.4
PUP3YER094C RPL14BP38754 138 aaKnown RBP6.32□□□□□ -1.4
PUP3YER094C PIC2P40035 300 aa6.32□□□□□ -1.4
PUP3YER094C YER188WP40103 239 aa6.32□□□□□ -1.4
PUP3YER094C YJL213WP40896 331 aa6.32□□□□□ -1.4
PUP3YER094C RTS2P40962 232 aa6.32□□□□□ -1.4
PUP3YER094C PAU4P53427 120 aa6.32□□□□□ -1.4
PUP3YER094C AVO2Q04749 426 aa6.32□□□□□ -1.4
PUP3YER094C PCC1Q3E833 88 aa6.32□□□□□ -1.4
PUP3YER094C YMR316C-AI2HB70 103 aa6.31□□□□□ -1.4
PUP3YER094C PIS1P06197 220 aaKnown RBP6.31□□□□□ -1.4
PUP3YER094C DFR1P07807 211 aaKnown RBP RIP-Chip data6.31□□□□□ -1.4not detected
PUP3YER094C FEN2P25621 512 aaKnown RBP6.31□□□□□ -1.4
PUP3YER094C ACP1P32463 125 aa6.31□□□□□ -1.4
PUP3YER094C YPL108WQ02872 168 aaPredicted RBP6.31□□□□□ -1.4
PUP3YER094C TY1A-DR3Q12441 440 aa6.31□□□□□ -1.4
PUP3YER094C RPL15AP05748 204 aaKnown RBP6.3□□□□□ -1.4
PUP3YER094C DAL3P32459 195 aa6.3□□□□□ -1.4
PUP3YER094C FPR2P32472 135 aa6.3□□□□□ -1.4
PUP3YER094C YGL015CP33199 130 aa6.3□□□□□ -1.4
PUP3YER094C MRPL38P35996 138 aaPredicted RBP6.3□□□□□ -1.4
PUP3YER094C YKL075CP36083 450 aa6.3□□□□□ -1.4
PUP3YER094C RPL15BP54780 204 aaPredicted RBP6.3□□□□□ -1.4
PUP3YER094C SRL1Q08673 210 aa6.3□□□□□ -1.4
PUP3YER094C YER145C-AA0A023PYF4 145 aa6.29□□□□□ -1.4
PUP3YER094C PAU1P0CE88 120 aa6.29□□□□□ -1.4
PUP3YER094C PAU14P0CE89 120 aa6.29□□□□□ -1.4
PUP3YER094C PAU6P0CE90 120 aa6.29□□□□□ -1.4
PUP3YER094C PAU18P0CE91 120 aa6.29□□□□□ -1.4
PUP3YER094C PAU8P0CE92 120 aa6.29□□□□□ -1.4
PUP3YER094C PAU11P0CE93 120 aa6.29□□□□□ -1.4
PUP3YER094C MRP2P10663 115 aaPredicted RBP6.29□□□□□ -1.4
PUP3YER094C CNB1P25296 175 aa6.29□□□□□ -1.4
PUP3YER094C RPS2P25443 254 aaKnown RBP6.29□□□□□ -1.4
PUP3YER094C ALK2P32789 676 aaPredicted RBP6.29□□□□□ -1.4
PUP3YER094C RRT1P38192 103 aa6.29□□□□□ -1.4
PUP3YER094C CDS1P38221 457 aa6.29□□□□□ -1.4
PUP3YER094C PAU13P38725 120 aa6.29□□□□□ -1.4
PUP3YER094C YAR068WP39564 161 aa6.29□□□□□ -1.4
PUP3YER094C GPP2P40106 250 aaKnown RBP6.29□□□□□ -1.4
PUP3YER094C POG1P40473 351 aa6.29□□□□□ -1.4
PUP3YER094C YIL024CP40543 189 aa6.29□□□□□ -1.4
PUP3YER094C WWM1P43582 211 aaKnown RBP6.29□□□□□ -1.4
PUP3YER094C LST7P53237 242 aa6.29□□□□□ -1.4
PUP3YER094C PAU10Q03050 120 aa6.29□□□□□ -1.4
PUP3YER094C ATC1Q04005 294 aa6.29□□□□□ -1.4
PUP3YER094C PAU20Q08322 120 aa6.29□□□□□ -1.4
PUP3YER094C PAU9Q3E770 120 aa6.29□□□□□ -1.4
PUP3YER094C YPS1P32329 569 aa6.28□□□□□ -1.4
PUP3YER094C AVT5P38176 459 aa6.28□□□□□ -1.4
PUP3YER094C DOG2P38773 246 aa6.28□□□□□ -1.4
PUP3YER094C DOG1P38774 246 aa6.28□□□□□ -1.4
PUP3YER094C TIF11P38912 153 aaKnown RBP6.28□□□□□ -1.4
PUP3YER094C BDH1P39714 382 aa6.28□□□□□ -1.4
PUP3YER094C SAS2P40963 338 aa6.28□□□□□ -1.4
PUP3YER094C ATG27P46989 271 aa6.28□□□□□ -1.4
PUP3YER094C TAX4P47030 604 aa6.28□□□□□ -1.4
PUP3YER094C YGR018CP53211 109 aa6.28□□□□□ -1.4
PUP3YER094C TIM11P81449 96 aaPredicted RBP6.28□□□□□ -1.4
PUP3YER094C SNO1Q03144 224 aa6.28□□□□□ -1.4
PUP3YER094C PBP4Q07362 185 aaKnown RBP6.28□□□□□ -1.4
PUP3YER094C IRC23Q08416 157 aa6.28□□□□□ -1.4
PUP3YER094C CCW14O13547 238 aa6.27□□□□□ -1.41
PUP3YER094C CDC7P06243 507 aa6.27□□□□□ -1.41
PUP3YER094C YCR022CP25620 114 aa6.27□□□□□ -1.41
PUP3YER094C CSH1P38287 376 aa6.27□□□□□ -1.41
PUP3YER094C SDH7Q04401 133 aa6.27□□□□□ -1.41
PUP3YER094C YMR253CQ04835 414 aa6.27□□□□□ -1.41
PUP3YER094C RXT3Q07458 294 aa6.27□□□□□ -1.41
PUP3YER094C TY1A-DR4O74302 440 aa6.26□□□□□ -1.41
PUP3YER094C TDH1P00360 332 aaKnown RBP6.26□□□□□ -1.41
PUP3YER094C TY1A-AP0CX57 440 aa6.26□□□□□ -1.41
PUP3YER094C TY1A-PR1P0CX58 440 aa6.26□□□□□ -1.41
PUP3YER094C TY1A-ORP0CX59 440 aa6.26□□□□□ -1.41
PUP3YER094C TY1A-PR2P0CX60 440 aa6.26□□□□□ -1.41
PUP3YER094C TY1A-DR5P0CX65 440 aa6.26□□□□□ -1.41
PUP3YER094C TY1A-ER2P0CX66 440 aa6.26□□□□□ -1.41
PUP3YER094C TY1A-GR3P0CX67 440 aa6.26□□□□□ -1.41
PUP3YER094C TY1A-LR1P0CX68 440 aa6.26□□□□□ -1.41
PUP3YER094C TY1A-MR2P0CX69 440 aa6.26□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 29.2 ms