RNA–Protein interactions for RNA: YBR154C

RPB5, Transcript of RNA polymerase subunit ABC27, yeastyeast

Gene RPB5, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB5YBR154C NUF2P33895 451 aa1.26□□□□□ -2.21
RPB5YBR154C TMA19P35691 167 aaKnown RBP1.26□□□□□ -2.21
RPB5YBR154C PAM17P36147 197 aa1.26□□□□□ -2.21
RPB5YBR154C YNL200CP40165 246 aaKnown RBP1.26□□□□□ -2.21
RPB5YBR154C YGL235WP53071 178 aa1.26□□□□□ -2.21
RPB5YBR154C YGL101WP53144 215 aa1.26□□□□□ -2.21
RPB5YBR154C TIM13P53299 105 aa1.26□□□□□ -2.21
RPB5YBR154C YMR253CQ04835 414 aa1.26□□□□□ -2.21
RPB5YBR154C YPR127WQ06494 345 aa1.26□□□□□ -2.21
RPB5YBR154C IRC23Q08416 157 aa1.26□□□□□ -2.21
RPB5YBR154C ATP20Q12233 115 aa1.26□□□□□ -2.21
RPB5YBR154C RPS28AQ3E7X9 67 aaPredicted RBP1.26□□□□□ -2.21
RPB5YBR154C CSH1P38287 376 aa1.25□□□□□ -2.21
RPB5YBR154C FYV4P38783 130 aaPredicted RBP1.25□□□□□ -2.21
RPB5YBR154C SBH2P52871 88 aa1.25□□□□□ -2.21
RPB5YBR154C YNL033WP53964 284 aa1.25□□□□□ -2.21
RPB5YBR154C YDR476CQ03362 224 aa1.25□□□□□ -2.21
RPB5YBR154C DIG2Q03373 323 aaKnown RBP1.25□□□□□ -2.21
RPB5YBR154C THI74Q04083 370 aa1.25□□□□□ -2.21
RPB5YBR154C GAL83Q04739 417 aa1.25□□□□□ -2.21
RPB5YBR154C FYV12Q08559 129 aa1.25□□□□□ -2.21
RPB5YBR154C YOR214CQ12282 236 aa1.25□□□□□ -2.21
RPB5YBR154C EFG1Q3E705 233 aaKnown RBP1.25□□□□□ -2.21
RPB5YBR154C FLO9P39712 1322 aa1.24□□□□□ -2.21
RPB5YBR154C YCR023CP25351 611 aa1.24□□□□□ -2.21
RPB5YBR154C STP22P25604 385 aa1.24□□□□□ -2.21
RPB5YBR154C HSP30P25619 332 aa1.24□□□□□ -2.21
RPB5YBR154C CPR5P35176 225 aa1.24□□□□□ -2.21
RPB5YBR154C GLR1P41921 483 aaKnown RBP1.24□□□□□ -2.21
RPB5YBR154C SBH1P52870 82 aa1.24□□□□□ -2.21
RPB5YBR154C DAD4P69851 72 aa1.24□□□□□ -2.21
RPB5YBR154C VPS28Q02767 242 aa1.24□□□□□ -2.21
RPB5YBR154C YPR174CQ06616 221 aaPredicted RBP1.24□□□□□ -2.21
RPB5YBR154C PET20Q99373 253 aa1.24□□□□□ -2.21
RPB5YBR154C UBI4P0CG63 381 aaKnown RBP1.23□□□□□ -2.21
RPB5YBR154C BUB2P26448 306 aaPredicted RBP1.23□□□□□ -2.21
RPB5YBR154C YKR045CP36138 183 aa1.23□□□□□ -2.21
RPB5YBR154C RRT1P38192 103 aa1.23□□□□□ -2.21
RPB5YBR154C YBR219CP38317 127 aa1.23□□□□□ -2.21
RPB5YBR154C YBR220CP38318 560 aa1.23□□□□□ -2.21
RPB5YBR154C SLM6P38343 150 aa1.23□□□□□ -2.21
RPB5YBR154C YER135CP40082 130 aa1.23□□□□□ -2.21
RPB5YBR154C YPL073CP40323 161 aa1.23□□□□□ -2.21
RPB5YBR154C LSM3P57743 89 aaKnown RBP1.23□□□□□ -2.21
RPB5YBR154C YKR005CQ02203 525 aa1.23□□□□□ -2.21
RPB5YBR154C GRX5Q02784 150 aa1.23□□□□□ -2.21
RPB5YBR154C RNH202Q05635 350 aa1.23□□□□□ -2.21
RPB5YBR154C YLR162WQ06235 118 aa1.23□□□□□ -2.21
RPB5YBR154C PRP11Q07350 266 aaPredicted RBP1.23□□□□□ -2.21
RPB5YBR154C YPR013CQ12145 317 aa1.23□□□□□ -2.21
RPB5YBR154C MDM35O60200 86 aa1.22□□□□□ -2.21
RPB5YBR154C RAD6P06104 172 aa1.22□□□□□ -2.21
RPB5YBR154C PBI2P0CT04 75 aaKnown RBP1.22□□□□□ -2.21
RPB5YBR154C SFK1P35735 353 aa1.22□□□□□ -2.21
RPB5YBR154C YHL018WP38744 120 aaPredicted RBP1.22□□□□□ -2.21
RPB5YBR154C DLS1P40366 167 aa1.22□□□□□ -2.21
RPB5YBR154C APQ12P40532 138 aa1.22□□□□□ -2.21
RPB5YBR154C ORM1P53224 222 aa1.22□□□□□ -2.21
RPB5YBR154C YHR007C-AQ07074 71 aa1.22□□□□□ -2.21
RPB5YBR154C YPR202WQ08993 238 aa1.22□□□□□ -2.21
RPB5YBR154C YOR015WQ12169 119 aa1.22□□□□□ -2.21
RPB5YBR154C YLR046CQ12253 270 aa1.22□□□□□ -2.21
RPB5YBR154C COX8P04039 78 aa1.21□□□□□ -2.22
RPB5YBR154C RPL2AP0CX45 254 aaKnown RBP1.21□□□□□ -2.22
RPB5YBR154C RPL2BP0CX46 254 aaKnown RBP1.21□□□□□ -2.22
RPB5YBR154C GSP2P32836 220 aaKnown RBP1.21□□□□□ -2.22
RPB5YBR154C SRP102P36057 244 aaPredicted RBP1.21□□□□□ -2.22
RPB5YBR154C RIO2P40160 425 aaKnown RBP1.21□□□□□ -2.22
RPB5YBR154C RPL13BP40212 199 aaKnown RBP1.21□□□□□ -2.22
RPB5YBR154C MOG1P47123 218 aa1.21□□□□□ -2.22
RPB5YBR154C THG1P53215 237 aaKnown RBP1.21□□□□□ -2.22
RPB5YBR154C NQM1P53228 333 aaPredicted RBP1.21□□□□□ -2.22
RPB5YBR154C RPL13AQ12690 199 aaPredicted RBP1.21□□□□□ -2.22
RPB5YBR154C YOR381W-AQ3E804 55 aa1.21□□□□□ -2.22
RPB5YBR154C TRM3Q07527 1436 aa1.21□□□□□ -2.22
RPB5YBR154C ATP5P09457 212 aa1.2□□□□□ -2.22
RPB5YBR154C GPA2P10823 449 aa1.2□□□□□ -2.22
RPB5YBR154C RPL30P14120 105 aaKnown RBP1.2□□□□□ -2.22
RPB5YBR154C YGL010WP25338 174 aa1.2□□□□□ -2.22
RPB5YBR154C PEX34P25584 144 aa1.2□□□□□ -2.22
RPB5YBR154C UPS2P35200 230 aa1.2□□□□□ -2.22
RPB5YBR154C YRA2P36036 203 aaKnown RBP RIP-Chip data1.2□□□□□ -2.22not detected
RPB5YBR154C YEL073CP39974 107 aa1.2□□□□□ -2.22
RPB5YBR154C LSM1P47017 172 aaKnown RBP1.2□□□□□ -2.22
RPB5YBR154C HHT1P61830 136 aa1.2□□□□□ -2.22
RPB5YBR154C PIR1Q03178 341 aa1.2□□□□□ -2.22
RPB5YBR154C DML1Q03652 475 aa1.2□□□□□ -2.22
RPB5YBR154C SYM1Q06563 197 aa1.2□□□□□ -2.22
RPB5YBR154C CSI2Q08054 341 aa1.2□□□□□ -2.22
RPB5YBR154C FIT2Q08906 153 aa1.2□□□□□ -2.22
RPB5YBR154C YOL162WP0CF19 215 aa1.19□□□□□ -2.22
RPB5YBR154C PET54P10834 293 aa1.19□□□□□ -2.22
RPB5YBR154C MAK31P23059 88 aa1.19□□□□□ -2.22
RPB5YBR154C UBC8P28263 218 aa1.19□□□□□ -2.22
RPB5YBR154C PTC1P35182 281 aa1.19□□□□□ -2.22
RPB5YBR154C HPA3P39979 161 aa1.19□□□□□ -2.22
RPB5YBR154C YEL028WP39989 153 aa1.19□□□□□ -2.22
RPB5YBR154C FLX1P40464 311 aa1.19□□□□□ -2.22
RPB5YBR154C NSE4P43124 402 aa1.19□□□□□ -2.22
RPB5YBR154C ALB1P47019 175 aaPredicted RBP1.19□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 37 ms