RNA–Protein interactions for RNA: YAL004W

YAL004W, Transcript of Dubious open reading frame, yeast

Gene YAL004W, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YAL004W	YAL004W	YLR099W-A	Q3E798	87 aa		3.01	□□□□□ -1.93
YAL004W	YAL004W	PBI2	P0CT04	75 aa	Known RBP	3	□□□□□ -1.93
YAL004W	YAL004W	LDS1	P31379	325 aa		3	□□□□□ -1.93
YAL004W	YAL004W	FRM2	P37261	193 aa		3	□□□□□ -1.93
YAL004W	YAL004W	HTD2	P38790	280 aa	Known RBP	3	□□□□□ -1.93
YAL004W	YAL004W	HPA3	P39979	161 aa		3	□□□□□ -1.93
YAL004W	YAL004W	AVT7	P40501	490 aa		3	□□□□□ -1.93
YAL004W	YAL004W	NCA3	P46955	337 aa		3	□□□□□ -1.93
YAL004W	YAL004W	DIE2	P50076	525 aa		3	□□□□□ -1.93
YAL004W	YAL004W	DOC1	P53068	250 aa		3	□□□□□ -1.93
YAL004W	YAL004W	HST4	P53688	370 aa		3	□□□□□ -1.93
YAL004W	YAL004W	HSK3	P69852	69 aa		3	□□□□□ -1.93
YAL004W	YAL004W	PET191	Q02772	108 aa		3	□□□□□ -1.93
YAL004W	YAL004W	MIM1	Q08176	113 aa		3	□□□□□ -1.93
YAL004W	YAL004W	YOR292C	Q08743	309 aa		3	□□□□□ -1.93
YAL004W	YAL004W	YOR385W	Q08909	290 aa		3	□□□□□ -1.93
YAL004W	YAL004W	AKR2	Q12013	749 aa		3	□□□□□ -1.93
YAL004W	YAL004W	ATP16	Q12165	160 aa		3	□□□□□ -1.93
YAL004W	YAL004W	RTR2	Q12378	196 aa		3	□□□□□ -1.93
YAL004W	YAL004W	KIN28	P06242	306 aa		2.99	□□□□□ -1.93
YAL004W	YAL004W	SEC4	P07560	215 aa	Known RBP	2.99	□□□□□ -1.93
YAL004W	YAL004W	RPL42A	P0CX27	106 aa	Known RBP	2.99	□□□□□ -1.93
YAL004W	YAL004W	RPL42B	P0CX28	106 aa	Known RBP	2.99	□□□□□ -1.93
YAL004W	YAL004W	CPR4	P25334	318 aa		2.99	□□□□□ -1.93
YAL004W	YAL004W	ERG24	P32462	438 aa	Known RBP	2.99	□□□□□ -1.93
YAL004W	YAL004W	YJL213W	P40896	331 aa		2.99	□□□□□ -1.93
YAL004W	YAL004W	SNO3	P43544	222 aa		2.99	□□□□□ -1.93
YAL004W	YAL004W	YJR015W	P47090	510 aa		2.99	□□□□□ -1.93
YAL004W	YAL004W	FMP41	P53889	259 aa	Known RBP	2.99	□□□□□ -1.93
YAL004W	YAL004W	AAH1	P53909	347 aa		2.99	□□□□□ -1.93
YAL004W	YAL004W	ARL3	Q02804	198 aa		2.99	□□□□□ -1.93
YAL004W	YAL004W	INP1	Q03694	420 aa		2.99	□□□□□ -1.93
YAL004W	YAL004W	YML108W	Q03759	105 aa		2.99	□□□□□ -1.93
YAL004W	YAL004W	YDR249C	Q03787	373 aa		2.99	□□□□□ -1.93
YAL004W	YAL004W	YMR252C	Q04814	134 aa		2.99	□□□□□ -1.93
YAL004W	YAL004W	PAL1	Q05518	499 aa	Known RBP	2.99	□□□□□ -1.93
YAL004W	YAL004W	HRI1	Q05905	244 aa	Known RBP	2.99	□□□□□ -1.93
YAL004W	YAL004W	FRQ1	Q06389	190 aa		2.99	□□□□□ -1.93
YAL004W	YAL004W	YOL160W	Q08321	113 aa		2.99	□□□□□ -1.93
YAL004W	YAL004W	YPL278C	Q08990	100 aa		2.99	□□□□□ -1.93
YAL004W	YAL004W	IMP1	P28627	190 aa		2.98	□□□□□ -1.93
YAL004W	YAL004W	PMU1	P36069	295 aa		2.98	□□□□□ -1.93
YAL004W	YAL004W	LSM12	P38828	187 aa	Known RBP	2.98	□□□□□ -1.93
YAL004W	YAL004W	FLO5	P38894	1075 aa		2.98	□□□□□ -1.93
YAL004W	YAL004W	SWM2	P40342	146 aa		2.98	□□□□□ -1.93
YAL004W	YAL004W	CFD1	P40558	293 aa		2.98	□□□□□ -1.93
YAL004W	YAL004W	SAY1	P53324	424 aa		2.98	□□□□□ -1.93
YAL004W	YAL004W	SDH7	Q04401	133 aa		2.98	□□□□□ -1.93
YAL004W	YAL004W	COA4	Q05809	96 aa		2.98	□□□□□ -1.93
YAL004W	YAL004W	MSA1	Q08471	629 aa		2.98	□□□□□ -1.93
YAL004W	YAL004W	TIR4	Q12218	487 aa	Predicted RBP	2.98	□□□□□ -1.93
YAL004W	YAL004W	YOR343C	Q12484	108 aa		2.98	□□□□□ -1.93
YAL004W	YAL004W	YHR214C-E	Q8TGK0	99 aa		2.98	□□□□□ -1.93
YAL004W	YAL004W	YPL229W	Q99395	206 aa		2.98	□□□□□ -1.93
YAL004W	YAL004W	TRP1	P00912	224 aa		2.97	□□□□□ -1.93
YAL004W	YAL004W	CYC3	P06182	269 aa		2.97	□□□□□ -1.93
YAL004W	YAL004W	YSF3	P0C074	85 aa	Predicted RBP	2.97	□□□□□ -1.93
YAL004W	YAL004W	MSI1	P13712	422 aa		2.97	□□□□□ -1.93
YAL004W	YAL004W	CKS1	P20486	150 aa	Known RBP	2.97	□□□□□ -1.93
YAL004W	YAL004W	RNA14	P25298	677 aa	Known RBP	2.97	□□□□□ -1.93
YAL004W	YAL004W	UTH1	P36135	365 aa		2.97	□□□□□ -1.93
YAL004W	YAL004W	POP8	P38208	133 aa		2.97	□□□□□ -1.93
YAL004W	YAL004W	YHL044W	P38727	235 aa		2.97	□□□□□ -1.93
YAL004W	YAL004W	YNL208W	P40159	199 aa	Known RBP	2.97	□□□□□ -1.93
YAL004W	YAL004W	XBP1	P40489	647 aa		2.97	□□□□□ -1.93
YAL004W	YAL004W	YIL024C	P40543	189 aa		2.97	□□□□□ -1.93
YAL004W	YAL004W	PAM16	P42949	149 aa		2.97	□□□□□ -1.93
YAL004W	YAL004W	SDS23	P53172	527 aa		2.97	□□□□□ -1.93
YAL004W	YAL004W	ADD37	Q03233	198 aa		2.97	□□□□□ -1.93
YAL004W	YAL004W	YMR254C	Q04838	102 aa		2.97	□□□□□ -1.93
YAL004W	YAL004W	IRC19	Q07843	230 aa		2.97	□□□□□ -1.93
YAL004W	YAL004W	HRT1	Q08273	121 aa		2.97	□□□□□ -1.93
YAL004W	YAL004W	ATX2	Q12067	313 aa		2.97	□□□□□ -1.93
YAL004W	YAL004W	YBL008W-A	Q3E821	79 aa		2.97	□□□□□ -1.93
YAL004W	YAL004W	IPP1	P00817	287 aa	Known RBP	2.96	□□□□□ -1.94
YAL004W	YAL004W	PHO2	P07269	559 aa		2.96	□□□□□ -1.94
YAL004W	YAL004W	CPR1	P14832	162 aa	Known RBP	2.96	□□□□□ -1.94
YAL004W	YAL004W	MAG1	P22134	296 aa	Known RBP	2.96	□□□□□ -1.94
YAL004W	YAL004W	YCR025C	P25352	136 aa		2.96	□□□□□ -1.94
YAL004W	YAL004W	YKL102C	P34249	101 aa		2.96	□□□□□ -1.94
YAL004W	YAL004W	MRPL27	P36526	146 aa	Predicted RBP	2.96	□□□□□ -1.94
YAL004W	YAL004W	PTI1	P39927	425 aa	Predicted RBP	2.96	□□□□□ -1.94
YAL004W	YAL004W	YIL012W	P40551	113 aa		2.96	□□□□□ -1.94
YAL004W	YAL004W	CAT5	P41735	233 aa		2.96	□□□□□ -1.94
YAL004W	YAL004W	YFL067W	P43537	175 aa		2.96	□□□□□ -1.94
YAL004W	YAL004W	YFR054C	P43622	192 aa		2.96	□□□□□ -1.94
YAL004W	YAL004W	SCW4	P53334	386 aa	Known RBP	2.96	□□□□□ -1.94
YAL004W	YAL004W	HHT1	P61830	136 aa		2.96	□□□□□ -1.94
YAL004W	YAL004W	DID2	P69771	204 aa		2.96	□□□□□ -1.94
YAL004W	YAL004W	PRP11	Q07350	266 aa	Predicted RBP	2.96	□□□□□ -1.94
YAL004W	YAL004W	DGA1	Q08650	418 aa		2.96	□□□□□ -1.94
YAL004W	YAL004W	NIP7	Q08962	181 aa	Known RBP	2.96	□□□□□ -1.94
YAL004W	YAL004W	CRC1	Q12289	327 aa		2.96	□□□□□ -1.94
YAL004W	YAL004W	YOR032W-A	Q8TGS1	66 aa		2.96	□□□□□ -1.94
YAL004W	YAL004W	MBF1	O14467	151 aa	Known RBP	2.95	□□□□□ -1.94
YAL004W	YAL004W	ADK1	P07170	222 aa	Known RBP	2.95	□□□□□ -1.94
YAL004W	YAL004W	UBI4	P0CG63	381 aa	Known RBP	2.95	□□□□□ -1.94
YAL004W	YAL004W	RPL2A	P0CX45	254 aa	Known RBP	2.95	□□□□□ -1.94
YAL004W	YAL004W	RPL2B	P0CX46	254 aa	Known RBP	2.95	□□□□□ -1.94
YAL004W	YAL004W	RNP1	P32385	249 aa		2.95	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 27.1 ms