RNA–Protein interactions for RNA: tP(UGG)A

TRN1, Transcript of Proline tRNA (tRNA-Pro), predicted by tRNAscan-SE analysis, yeastyeast

Gene TRN1, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRN1tP(UGG)A YPL264CQ08980 353 aa12.71□□□□□ -0.37
TRN1tP(UGG)A UTP20P35194 2493 aaKnown RBP12.7□□□□□ -0.38
TRN1tP(UGG)A SUA7P29055 345 aaPredicted RBP12.7□□□□□ -0.38
TRN1tP(UGG)A SLM6P38343 150 aa12.7□□□□□ -0.38
TRN1tP(UGG)A YFL054CP43549 646 aa12.7□□□□□ -0.38
TRN1tP(UGG)A TIM44Q01852 431 aa12.7□□□□□ -0.38
TRN1tP(UGG)A EST3Q03096 181 aa12.7□□□□□ -0.38
TRN1tP(UGG)A BER1Q06688 274 aaKnown RBP12.7□□□□□ -0.38
TRN1tP(UGG)A SRL1Q08673 210 aa12.7□□□□□ -0.38
TRN1tP(UGG)A YGL258W-AQ3E740 77 aa12.7□□□□□ -0.38
TRN1tP(UGG)A DYN2Q02647 92 aa12.69□□□□□ -0.38
TRN1tP(UGG)A YBR184WP38299 523 aa12.68□□□□□ -0.38
TRN1tP(UGG)A GCV3P39726 170 aaPredicted RBP12.68□□□□□ -0.38
TRN1tP(UGG)A COX15P40086 486 aa12.68□□□□□ -0.38
TRN1tP(UGG)A PDR17P53844 350 aa12.68□□□□□ -0.38
TRN1tP(UGG)A YMR082CQ04276 118 aa12.68□□□□□ -0.38
TRN1tP(UGG)A YHR213W-AQ8TGT4 77 aa12.68□□□□□ -0.38
TRN1tP(UGG)A ASP1P38986 381 aaPredicted RBP12.67□□□□□ -0.38
TRN1tP(UGG)A TOM40P23644 387 aaKnown RBP12.66□□□□□ -0.38
TRN1tP(UGG)A YKR045CP36138 183 aa12.66□□□□□ -0.38
TRN1tP(UGG)A RTC3P38804 111 aaPredicted RBP12.66□□□□□ -0.38
TRN1tP(UGG)A AGC1Q12482 902 aa12.66□□□□□ -0.38
TRN1tP(UGG)A SSU72P53538 206 aaPredicted RBP12.65□□□□□ -0.38
TRN1tP(UGG)A HCH1P53834 153 aa12.65□□□□□ -0.38
TRN1tP(UGG)A DCS1Q06151 350 aa12.65□□□□□ -0.38
TRN1tP(UGG)A TRP4P07285 380 aaPredicted RBP12.64□□□□□ -0.39
TRN1tP(UGG)A UBI4P0CG63 381 aaKnown RBP12.64□□□□□ -0.39
TRN1tP(UGG)A FCY2P17064 533 aa12.64□□□□□ -0.39
TRN1tP(UGG)A RPD3P32561 433 aa12.64□□□□□ -0.39
TRN1tP(UGG)A DUG3P53871 357 aa12.64□□□□□ -0.39
TRN1tP(UGG)A EMP24P32803 203 aaKnown RBP12.63□□□□□ -0.39
TRN1tP(UGG)A YEA4P40004 342 aa12.63□□□□□ -0.39
TRN1tP(UGG)A NSA2P40078 261 aaKnown RBP12.63□□□□□ -0.39
TRN1tP(UGG)A YJL213WP40896 331 aa12.63□□□□□ -0.39
TRN1tP(UGG)A LST8P41318 303 aa12.63□□□□□ -0.39
TRN1tP(UGG)A WWM1P43582 211 aaKnown RBP12.63□□□□□ -0.39
TRN1tP(UGG)A YJL163CP46996 555 aa12.63□□□□□ -0.39
TRN1tP(UGG)A SRB7P47822 140 aa12.63□□□□□ -0.39
TRN1tP(UGG)A WSS1P38838 269 aa12.62□□□□□ -0.39
TRN1tP(UGG)A FRQ1Q06389 190 aa12.62□□□□□ -0.39
TRN1tP(UGG)A POC4Q12245 148 aaPredicted RBP12.62□□□□□ -0.39
TRN1tP(UGG)A FMP16Q12497 93 aa12.62□□□□□ -0.39
TRN1tP(UGG)A FEN2P25621 512 aaKnown RBP12.61□□□□□ -0.39
TRN1tP(UGG)A MOT3P54785 490 aaKnown RBP12.61□□□□□ -0.39
TRN1tP(UGG)A USV1Q12132 391 aa12.61□□□□□ -0.39
TRN1tP(UGG)A YPS3Q12303 508 aa12.61□□□□□ -0.39
TRN1tP(UGG)A PRR2Q12310 699 aa12.61□□□□□ -0.39
TRN1tP(UGG)A YCR025CP25352 136 aa12.6□□□□□ -0.39
TRN1tP(UGG)A UPS2P35200 230 aa12.6□□□□□ -0.39
TRN1tP(UGG)A YPT31P38555 223 aaKnown RBP12.6□□□□□ -0.39
TRN1tP(UGG)A PSD1P39006 500 aa12.6□□□□□ -0.39
TRN1tP(UGG)A BUL1P48524 976 aa12.6□□□□□ -0.39
TRN1tP(UGG)A TIF11P38912 153 aaKnown RBP12.59□□□□□ -0.39
TRN1tP(UGG)A VMA7P39111 118 aa12.59□□□□□ -0.39
TRN1tP(UGG)A HXT14P42833 540 aa12.59□□□□□ -0.39
TRN1tP(UGG)A SNX4P47057 423 aa12.59□□□□□ -0.39
TRN1tP(UGG)A SOD1P00445 154 aaKnown RBP12.58□□□□□ -0.4
TRN1tP(UGG)A RPS25BP0C0T4 108 aaKnown RBP12.58□□□□□ -0.4
TRN1tP(UGG)A MRS3P10566 314 aa12.58□□□□□ -0.4
TRN1tP(UGG)A RKI1Q12189 258 aa12.58□□□□□ -0.4
TRN1tP(UGG)A RPS25AQ3E792 108 aaPredicted RBP12.58□□□□□ -0.4
TRN1tP(UGG)A YCR041WP37265 110 aa12.57□□□□□ -0.4
TRN1tP(UGG)A GPP2P40106 250 aaKnown RBP12.57□□□□□ -0.4
TRN1tP(UGG)A ERG25P53045 309 aa12.57□□□□□ -0.4
TRN1tP(UGG)A MRPS17Q03246 237 aaPredicted RBP12.57□□□□□ -0.4
TRN1tP(UGG)A DAL3P32459 195 aa12.56□□□□□ -0.4
TRN1tP(UGG)A TDA6Q06466 467 aa12.56□□□□□ -0.4
TRN1tP(UGG)A YDL242WQ07746 117 aa12.56□□□□□ -0.4
TRN1tP(UGG)A MSA1Q08471 629 aa12.56□□□□□ -0.4
TRN1tP(UGG)A YBR085C-AO43137 85 aa12.55□□□□□ -0.4
TRN1tP(UGG)A RPP1AP05318 106 aaPredicted RBP12.55□□□□□ -0.4
TRN1tP(UGG)A MRPL38P35996 138 aaPredicted RBP12.55□□□□□ -0.4
TRN1tP(UGG)A PHO23P50947 330 aa12.55□□□□□ -0.4
TRN1tP(UGG)A YHP1Q04116 353 aa12.55□□□□□ -0.4
TRN1tP(UGG)A YLR179CQ06252 201 aaKnown RBP12.55□□□□□ -0.4
TRN1tP(UGG)A RAD28Q12021 506 aa12.55□□□□□ -0.4
TRN1tP(UGG)A PAA1Q12447 191 aaKnown RBP12.55□□□□□ -0.4
TRN1tP(UGG)A ILV5P06168 395 aaKnown RBP12.54□□□□□ -0.4
TRN1tP(UGG)A PEX7P39108 375 aa12.54□□□□□ -0.4
TRN1tP(UGG)A YGR269WP40326 108 aa12.54□□□□□ -0.4
TRN1tP(UGG)A PRS4P38063 326 aaPredicted RBP12.53□□□□□ -0.4
TRN1tP(UGG)A YJR015WP47090 510 aa12.53□□□□□ -0.4
TRN1tP(UGG)A YNR066CP53752 436 aa12.53□□□□□ -0.4
TRN1tP(UGG)A PBP4Q07362 185 aaKnown RBP12.53□□□□□ -0.4
TRN1tP(UGG)A YDR157WA0A023PZE8 133 aa12.52□□□□□ -0.41
TRN1tP(UGG)A YPS1P32329 569 aa12.52□□□□□ -0.41
TRN1tP(UGG)A YKL075CP36083 450 aa12.52□□□□□ -0.41
TRN1tP(UGG)A EMC5P40540 141 aa12.52□□□□□ -0.41
TRN1tP(UGG)A ORM1P53224 222 aa12.52□□□□□ -0.41
TRN1tP(UGG)A SPG4Q04438 115 aa12.52□□□□□ -0.41
TRN1tP(UGG)A ELO2P25358 347 aa12.51□□□□□ -0.41
TRN1tP(UGG)A INO2P26798 304 aa12.51□□□□□ -0.41
TRN1tP(UGG)A SIP1P32578 815 aa12.51□□□□□ -0.41
TRN1tP(UGG)A YBL071CP38185 102 aa12.51□□□□□ -0.41
TRN1tP(UGG)A IRC23Q08416 157 aa12.51□□□□□ -0.41
TRN1tP(UGG)A POM34Q12445 299 aa12.51□□□□□ -0.41
TRN1tP(UGG)A SPO13P23624 291 aa12.5□□□□□ -0.41
TRN1tP(UGG)A QDR3P38227 689 aa12.5□□□□□ -0.41
TRN1tP(UGG)A YAR068WP39564 161 aa12.5□□□□□ -0.41
TRN1tP(UGG)A YAP1802P53309 568 aa12.5□□□□□ -0.41
Retrieved 100 of 5,963 RNA–protein pairs in 106.2 ms