RNA–Protein interactions for RNA: snR42

snR42, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR42, Length 351 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR42snR42 VPS55P47111 140 aa2.53□□□□□ -2
snR42snR42 DIE2P50076 525 aa2.53□□□□□ -2
snR42snR42 UBP8P50102 471 aa2.53□□□□□ -2
snR42snR42 TOS8P53147 276 aa2.53□□□□□ -2
snR42snR42 GIS2P53849 153 aaKnown RBP RIP-Chip data2.53□□□□□ -2not detected
snR42snR42 STD1Q02794 444 aa2.53□□□□□ -2
snR42snR42 CAB5Q03941 241 aa2.53□□□□□ -2
snR42snR42 NGL1Q08213 363 aaKnown RBP2.53□□□□□ -2
snR42snR42 USV1Q12132 391 aa2.53□□□□□ -2
snR42snR42 RDI1Q12434 202 aa2.53□□□□□ -2
snR42snR42 YPR108W-AQ3E7B3 70 aa2.53□□□□□ -2
snR42snR42 HUG1Q6Q5K6 68 aa2.53□□□□□ -2
snR42snR42 PET20Q99373 253 aa2.53□□□□□ -2
snR42snR42 NOP1P15646 327 aaKnown RBP2.52□□□□□ -2.01
snR42snR42 YMR31P19955 123 aa2.52□□□□□ -2.01
snR42snR42 ELO2P25358 347 aa2.52□□□□□ -2.01
snR42snR42 HYM1P32464 399 aa2.52□□□□□ -2.01
snR42snR42 FMT1P32785 401 aa2.52□□□□□ -2.01
snR42snR42 UTP11P34247 250 aaPredicted RBP2.52□□□□□ -2.01
snR42snR42 POP8P38208 133 aa2.52□□□□□ -2.01
snR42snR42 BFR1P38934 470 aaKnown RBP RIP-Chip data2.52□□□□□ -2.01not detected
snR42snR42 RFC2P40348 353 aa2.52□□□□□ -2.01
snR42snR42 PRM5P40476 318 aa2.52□□□□□ -2.01
snR42snR42 WWM1P43582 211 aaKnown RBP2.52□□□□□ -2.01
snR42snR42 FIP1P45976 327 aa2.52□□□□□ -2.01
snR42snR42 IMD3P50095 523 aaKnown RBP2.52□□□□□ -2.01
snR42snR42 CWC23P52868 283 aaPredicted RBP2.52□□□□□ -2.01
snR42snR42 LSM7P53905 115 aaKnown RBP2.52□□□□□ -2.01
snR42snR42 YMR181CQ03231 154 aa2.52□□□□□ -2.01
snR42snR42 VBA1Q04301 562 aa2.52□□□□□ -2.01
snR42snR42 HRD1Q08109 551 aa2.52□□□□□ -2.01
snR42snR42 YOL029CQ08187 201 aa2.52□□□□□ -2.01
snR42snR42 YNG1Q08465 219 aa2.52□□□□□ -2.01
snR42snR42 PRM3Q08931 133 aa2.52□□□□□ -2.01
snR42snR42 ATG31Q12421 196 aa2.52□□□□□ -2.01
snR42snR42 MRPL23Q12487 163 aaPredicted RBP2.52□□□□□ -2.01
snR42snR42 PRM4Q12498 284 aa2.52□□□□□ -2.01
snR42snR42 TDH1P00360 332 aaKnown RBP2.51□□□□□ -2.01
snR42snR42 YHR212W-AP0CX91 67 aa2.51□□□□□ -2.01
snR42snR42 CAP2P13517 287 aa2.51□□□□□ -2.01
snR42snR42 TAL1P15019 335 aaKnown RBP2.51□□□□□ -2.01
snR42snR42 MRS4P23500 304 aa2.51□□□□□ -2.01
snR42snR42 CPR4P25334 318 aa2.51□□□□□ -2.01
snR42snR42 YCP4P25349 247 aaKnown RBP2.51□□□□□ -2.01
snR42snR42 YBR144CP34215 104 aa2.51□□□□□ -2.01
snR42snR42 MRPL38P35996 138 aaPredicted RBP2.51□□□□□ -2.01
snR42snR42 MRPL27P36526 146 aaPredicted RBP2.51□□□□□ -2.01
snR42snR42 ATP3P38077 311 aaKnown RBP2.51□□□□□ -2.01
snR42snR42 YPT31P38555 223 aaKnown RBP2.51□□□□□ -2.01
snR42snR42 POP2P39008 433 aa2.51□□□□□ -2.01
snR42snR42 MRPL49P40858 161 aaPredicted RBP2.51□□□□□ -2.01
snR42snR42 LSM1P47017 172 aaKnown RBP2.51□□□□□ -2.01
snR42snR42 YJR012CP47087 207 aa2.51□□□□□ -2.01
snR42snR42 COX18P53239 316 aa2.51□□□□□ -2.01
snR42snR42 CRH1P53301 507 aa2.51□□□□□ -2.01
snR42snR42 CAB4P53332 305 aa2.51□□□□□ -2.01
snR42snR42 FMP42Q04991 504 aa2.51□□□□□ -2.01
snR42snR42 FSH2Q05015 223 aa2.51□□□□□ -2.01
snR42snR42 TRI1Q05024 226 aa2.51□□□□□ -2.01
snR42snR42 RTT103Q05543 409 aa2.51□□□□□ -2.01
snR42snR42 PAM18Q07914 168 aa2.51□□□□□ -2.01
snR42snR42 VPS63O13549 108 aa2.5□□□□□ -2.01
snR42snR42 RPS8AP0CX39 200 aaKnown RBP2.5□□□□□ -2.01
snR42snR42 RPS8BP0CX40 200 aaKnown RBP2.5□□□□□ -2.01
snR42snR42 FRS1P15624 595 aaKnown RBP2.5□□□□□ -2.01
snR42snR42 MIR1P23641 311 aaKnown RBP2.5□□□□□ -2.01
snR42snR42 YPS1P32329 569 aa2.5□□□□□ -2.01
snR42snR42 SPS18P32572 300 aa2.5□□□□□ -2.01
snR42snR42 HOT13P36078 116 aa2.5□□□□□ -2.01
snR42snR42 ERV15P38312 142 aa2.5□□□□□ -2.01
snR42snR42 GET2P40056 285 aa2.5□□□□□ -2.01
snR42snR42 COX15P40086 486 aa2.5□□□□□ -2.01
snR42snR42 CPD1P53314 239 aa2.5□□□□□ -2.01
snR42snR42 SSU72P53538 206 aaPredicted RBP2.5□□□□□ -2.01
snR42snR42 THI74Q04083 370 aa2.5□□□□□ -2.01
snR42snR42 STP4Q07351 490 aa2.5□□□□□ -2.01
snR42snR42 PBP4Q07362 185 aaKnown RBP2.5□□□□□ -2.01
snR42snR42 IRC23Q08416 157 aa2.5□□□□□ -2.01
snR42snR42 FEX2Q08991 375 aa2.5□□□□□ -2.01
snR42snR42 BOL1Q3E793 110 aa2.5□□□□□ -2.01
snR42snR42 TFB5Q3E7C1 72 aaPredicted RBP2.5□□□□□ -2.01
snR42snR42 COX2P00410 251 aa2.49□□□□□ -2.01
snR42snR42 URA5P13298 226 aaKnown RBP2.49□□□□□ -2.01
snR42snR42 STF2P16965 84 aa2.49□□□□□ -2.01
snR42snR42 GRX2P17695 143 aaKnown RBP2.49□□□□□ -2.01
snR42snR42 SPT14P32363 452 aa2.49□□□□□ -2.01
snR42snR42 YKR045CP36138 183 aa2.49□□□□□ -2.01
snR42snR42 RTC3P38804 111 aaPredicted RBP2.49□□□□□ -2.01
snR42snR42 LST8P41318 303 aa2.49□□□□□ -2.01
snR42snR42 HAM1P47119 197 aaKnown RBP2.49□□□□□ -2.01
snR42snR42 ERG25P53045 309 aa2.49□□□□□ -2.01
snR42snR42 ERV25P54837 211 aaKnown RBP2.49□□□□□ -2.01
snR42snR42 DYN2Q02647 92 aa2.49□□□□□ -2.01
snR42snR42 VPS28Q02767 242 aa2.49□□□□□ -2.01
snR42snR42 VPS71Q03433 280 aa2.49□□□□□ -2.01
snR42snR42 MSC3Q05812 728 aa2.49□□□□□ -2.01
snR42snR42 RRG8Q06109 277 aa2.49□□□□□ -2.01
snR42snR42 SYM1Q06563 197 aa2.49□□□□□ -2.01
snR42snR42 YOR385WQ08909 290 aa2.49□□□□□ -2.01
snR42snR42 FEX1Q08913 375 aa2.49□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 27.9 ms