RNA–Protein interactions for RNA: YMR190C

SGS1, Transcript of RecQ family nucleolar DNA helicase, yeastyeast

Gene SGS1, Length 4,344 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGS1YMR190C IRA1P18963 3092 aa2.03□□□□□ -2.09
SGS1YMR190C YND1P40009 630 aa2.03□□□□□ -2.09
SGS1YMR190C VPS71Q03433 280 aa2.03□□□□□ -2.09
SGS1YMR190C YTH1Q06102 208 aaPredicted RBP2.03□□□□□ -2.09
SGS1YMR190C YPD1Q07688 167 aa2.03□□□□□ -2.09
SGS1YMR190C RKI1Q12189 258 aa2.03□□□□□ -2.09
SGS1YMR190C RNH203Q12338 110 aa2.03□□□□□ -2.09
SGS1YMR190C HUT1Q12520 339 aa2.03□□□□□ -2.09
SGS1YMR190C YBR056W-AI2HB52 66 aa2.02□□□□□ -2.09
SGS1YMR190C YBR085C-AO43137 85 aa2.02□□□□□ -2.09
SGS1YMR190C RPB7P34087 171 aa2.02□□□□□ -2.09
SGS1YMR190C CPR5P35176 225 aa2.02□□□□□ -2.09
SGS1YMR190C TRS20P38334 175 aa2.02□□□□□ -2.09
SGS1YMR190C ASP1P38986 381 aaPredicted RBP2.02□□□□□ -2.09
SGS1YMR190C SSN8P47821 323 aa2.02□□□□□ -2.09
SGS1YMR190C ERI1P62651 68 aaKnown RBP2.02□□□□□ -2.09
SGS1YMR190C YLR031WQ07978 186 aa2.02□□□□□ -2.09
SGS1YMR190C YPR063CQ12160 140 aa2.02□□□□□ -2.09
SGS1YMR190C YPR108W-AQ3E7B3 70 aa2.02□□□□□ -2.09
SGS1YMR190C FUS3P16892 353 aaKnown RBP2.02□□□□□ -2.09
SGS1YMR190C POP8P38208 133 aa2.02□□□□□ -2.09
SGS1YMR190C BFR1P38934 470 aaKnown RBP RIP-Chip data2.02□□□□□ -2.09not detected
SGS1YMR190C SWM2P40342 146 aa2.02□□□□□ -2.09
SGS1YMR190C MCM22P47167 239 aa2.02□□□□□ -2.09
SGS1YMR190C YIF1P53845 314 aaKnown RBP2.02□□□□□ -2.09
SGS1YMR190C STD1Q02794 444 aa2.02□□□□□ -2.09
SGS1YMR190C YCT1Q12235 531 aa2.02□□□□□ -2.09
SGS1YMR190C TY1A-DR3Q12441 440 aa2.02□□□□□ -2.09
SGS1YMR190C VMA9Q3E7B6 73 aa2.02□□□□□ -2.09
SGS1YMR190C AFR1P33304 620 aa2.02□□□□□ -2.09
SGS1YMR190C YOX1P34161 385 aa2.02□□□□□ -2.09
SGS1YMR190C GCV3P39726 170 aaPredicted RBP2.02□□□□□ -2.09
SGS1YMR190C ATF1P40353 525 aa2.02□□□□□ -2.09
SGS1YMR190C YJR111CP47148 283 aaKnown RBP2.02□□□□□ -2.09
SGS1YMR190C YAP1802P53309 568 aa2.02□□□□□ -2.09
SGS1YMR190C APJ1P53940 528 aa2.02□□□□□ -2.09
SGS1YMR190C Q0142Q9ZZW4 58 aa2.02□□□□□ -2.09
SGS1YMR190C RPP2AP05319 106 aaKnown RBP2.01□□□□□ -2.09
SGS1YMR190C YCR025CP25352 136 aa2.01□□□□□ -2.09
SGS1YMR190C LDS1P31379 325 aa2.01□□□□□ -2.09
SGS1YMR190C ALG14P38242 237 aa2.01□□□□□ -2.09
SGS1YMR190C NTC20P38302 140 aaPredicted RBP2.01□□□□□ -2.09
SGS1YMR190C YER079WP40052 210 aaKnown RBP2.01□□□□□ -2.09
SGS1YMR190C RPA34P47006 233 aaPredicted RBP2.01□□□□□ -2.09
SGS1YMR190C HHO1P53551 258 aa2.01□□□□□ -2.09
SGS1YMR190C YML108WQ03759 105 aa2.01□□□□□ -2.09
SGS1YMR190C DAL4Q04895 635 aa2.01□□□□□ -2.09
SGS1YMR190C UBA3Q99344 299 aa2.01□□□□□ -2.09
SGS1YMR190C YHR138CP38841 114 aaPredicted RBP2.01□□□□□ -2.09
SGS1YMR190C YEA6P39953 335 aa2.01□□□□□ -2.09
SGS1YMR190C SPC25P40014 221 aa2.01□□□□□ -2.09
SGS1YMR190C TIM44Q01852 431 aa2.01□□□□□ -2.09
SGS1YMR190C YPL077CQ02831 240 aa2.01□□□□□ -2.09
SGS1YMR190C SDH7Q04401 133 aa2.01□□□□□ -2.09
SGS1YMR190C YDR286CQ05530 114 aa2.01□□□□□ -2.09
SGS1YMR190C COX19Q3E731 98 aa2.01□□□□□ -2.09
SGS1YMR190C BOL1Q3E793 110 aa2.01□□□□□ -2.09
SGS1YMR190C COA2Q3E823 68 aa2.01□□□□□ -2.09
SGS1YMR190C MRS4P23500 304 aa2.01□□□□□ -2.09
SGS1YMR190C MIX23P38162 196 aa2.01□□□□□ -2.09
SGS1YMR190C SNF11P38956 169 aa2.01□□□□□ -2.09
SGS1YMR190C SRB7P47822 140 aa2.01□□□□□ -2.09
SGS1YMR190C RPL9BP51401 191 aaKnown RBP2.01□□□□□ -2.09
SGS1YMR190C YGL185CP53100 379 aa2.01□□□□□ -2.09
SGS1YMR190C PNC1P53184 216 aaKnown RBP2.01□□□□□ -2.09
SGS1YMR190C GAT3Q07928 141 aa2.01□□□□□ -2.09
SGS1YMR190C EAF3Q12432 401 aa2.01□□□□□ -2.09
SGS1YMR190C URA2P07259 2214 aaKnown RBP2.01□□□□□ -2.09
SGS1YMR190C PMU1P36069 295 aa2□□□□□ -2.09
SGS1YMR190C PAN3P36102 679 aaPredicted RBP2□□□□□ -2.09
SGS1YMR190C YBR184WP38299 523 aa2□□□□□ -2.09
SGS1YMR190C SLM6P38343 150 aa2□□□□□ -2.09
SGS1YMR190C TIR3P40552 269 aa2□□□□□ -2.09
SGS1YMR190C YFL051CP43552 160 aa2□□□□□ -2.09
SGS1YMR190C UBP8P50102 471 aa2□□□□□ -2.09
SGS1YMR190C YGL117WP53133 265 aa2□□□□□ -2.09
SGS1YMR190C FMP41P53889 259 aaKnown RBP2□□□□□ -2.09
SGS1YMR190C DID2P69771 204 aa2□□□□□ -2.09
SGS1YMR190C YOR292CQ08743 309 aa2□□□□□ -2.09
SGS1YMR190C MED4Q12343 284 aa2□□□□□ -2.09
SGS1YMR190C ERV1P27882 189 aa2□□□□□ -2.09
SGS1YMR190C GAR1P28007 205 aaKnown RBP2□□□□□ -2.09
SGS1YMR190C SWD3P38123 315 aa2□□□□□ -2.09
SGS1YMR190C BUL1P48524 976 aa2□□□□□ -2.09
SGS1YMR190C PHO23P50947 330 aa2□□□□□ -2.09
SGS1YMR190C YML018CQ03730 393 aa2□□□□□ -2.09
SGS1YMR190C YMR082CQ04276 118 aa2□□□□□ -2.09
SGS1YMR190C BER1Q06688 274 aaKnown RBP2□□□□□ -2.09
SGS1YMR190C FEX2Q08991 375 aa2□□□□□ -2.09
SGS1YMR190C CUP2P15315 225 aa2□□□□□ -2.09
SGS1YMR190C ERG3P32353 365 aa2□□□□□ -2.09
SGS1YMR190C YUH1P35127 236 aa2□□□□□ -2.09
SGS1YMR190C YKL162CP36052 402 aa2□□□□□ -2.09
SGS1YMR190C COX15P40086 486 aa2□□□□□ -2.09
SGS1YMR190C COX16P47081 118 aa2□□□□□ -2.09
SGS1YMR190C COX12Q01519 83 aa2□□□□□ -2.09
SGS1YMR190C CAB5Q03941 241 aa2□□□□□ -2.09
SGS1YMR190C ERP1Q05359 219 aaKnown RBP2□□□□□ -2.09
SGS1YMR190C FEX1Q08913 375 aa2□□□□□ -2.09
SGS1YMR190C ANB1P19211 157 aa2□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 56.5 ms