RNA–Protein interactions for RNA: YMR065W

KAR5, Transcript of Protein required for nuclear membrane fusion during karyogamy, yeast

Gene KAR5, Length 1,515 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
KAR5	YMR065W	CSI2	Q08054	341 aa		2.07	□□□□□ -2.08
KAR5	YMR065W	NHP6B	P11633	99 aa	Known RBP	2.06	□□□□□ -2.08
KAR5	YMR065W	DBF2	P22204	572 aa		2.06	□□□□□ -2.08
KAR5	YMR065W	OTU1	P43558	301 aa		2.06	□□□□□ -2.08
KAR5	YMR065W	GAS3	Q03655	524 aa		2.06	□□□□□ -2.08
KAR5	YMR065W	SEY1	Q99287	776 aa		2.06	□□□□□ -2.08
KAR5	YMR065W	MYO1	P08964	1928 aa		2.05	□□□□□ -2.08
KAR5	YMR065W	SAC3	P46674	1301 aa		2.05	□□□□□ -2.08
KAR5	YMR065W	YGL010W	P25338	174 aa		2.05	□□□□□ -2.08
KAR5	YMR065W	FZF1	P32805	299 aa		2.05	□□□□□ -2.08
KAR5	YMR065W	APS1	P35181	156 aa		2.05	□□□□□ -2.08
KAR5	YMR065W	YET1	P35723	206 aa		2.05	□□□□□ -2.08
KAR5	YMR065W	YRB2	P40517	327 aa		2.05	□□□□□ -2.08
KAR5	YMR065W	YRB1	P41920	201 aa	Known RBP	2.05	□□□□□ -2.08
KAR5	YMR065W	TSC3	Q3E790	80 aa		2.05	□□□□□ -2.08
KAR5	YMR065W	PBN1	P25580	416 aa		2.04	□□□□□ -2.08
KAR5	YMR065W	DOC1	P53068	250 aa		2.04	□□□□□ -2.08
KAR5	YMR065W	SWP1	Q02795	286 aa		2.04	□□□□□ -2.08
KAR5	YMR065W	RUD3	Q12234	484 aa	Known RBP	2.04	□□□□□ -2.08
KAR5	YMR065W	ACC1	Q00955	2233 aa	Known RBP	2.04	□□□□□ -2.08
KAR5	YMR065W	UMP1	P38293	148 aa		2.03	□□□□□ -2.08
KAR5	YMR065W	RTC3	P38804	111 aa	Predicted RBP	2.03	□□□□□ -2.08
KAR5	YMR065W	YLR162W	Q06235	118 aa		2.03	□□□□□ -2.08
KAR5	YMR065W	RPL40A	P0CH08	128 aa	Known RBP	2.02	□□□□□ -2.09
KAR5	YMR065W	RPL40B	P0CH09	128 aa	Known RBP	2.02	□□□□□ -2.09
KAR5	YMR065W	SNC2	P33328	115 aa		2.02	□□□□□ -2.09
KAR5	YMR065W	MRPL17	P36528	281 aa		2.02	□□□□□ -2.09
KAR5	YMR065W	YBR220C	P38318	560 aa		2.02	□□□□□ -2.09
KAR5	YMR065W	ERG28	P40030	148 aa		2.02	□□□□□ -2.09
KAR5	YMR065W	JLP1	Q12358	412 aa		2.02	□□□□□ -2.09
KAR5	YMR065W	YDR524C-B	Q3E6R4	66 aa		2.02	□□□□□ -2.09
KAR5	YMR065W	YKL183C-A	Q3E765	70 aa		2.02	□□□□□ -2.09
KAR5	YMR065W	RIF1	P29539	1916 aa		2.02	□□□□□ -2.09
KAR5	YMR065W	STE18	P18852	110 aa		2.01	□□□□□ -2.09
KAR5	YMR065W	NTG1	P31378	399 aa		2.01	□□□□□ -2.09
KAR5	YMR065W	GCN20	P43535	752 aa	Known RBP	2.01	□□□□□ -2.09
KAR5	YMR065W	ADO1	P47143	340 aa	Known RBP	2.01	□□□□□ -2.09
KAR5	YMR065W	SAY1	P53324	424 aa		2.01	□□□□□ -2.09
KAR5	YMR065W	NCB2	Q92317	146 aa		2.01	□□□□□ -2.09
KAR5	YMR065W	TRA1	P38811	3744 aa		2.01	□□□□□ -2.09
KAR5	YMR065W	TIM9	O74700	87 aa		2.01	□□□□□ -2.09
KAR5	YMR065W	GCN3	P14741	305 aa		2.01	□□□□□ -2.09
KAR5	YMR065W	COQ1	P18900	473 aa		2.01	□□□□□ -2.09
KAR5	YMR065W	FPR1	P20081	114 aa	Known RBP	2.01	□□□□□ -2.09
KAR5	YMR065W	CBT1	P36038	271 aa	Predicted RBP	2.01	□□□□□ -2.09
KAR5	YMR065W	GAA1	P39012	614 aa		2.01	□□□□□ -2.09
KAR5	YMR065W	RMD6	P39975	231 aa		2.01	□□□□□ -2.09
KAR5	YMR065W	RPL13B	P40212	199 aa	Known RBP	2.01	□□□□□ -2.09
KAR5	YMR065W	MSS2	P40990	351 aa		2.01	□□□□□ -2.09
KAR5	YMR065W	YFH7	P43591	353 aa		2.01	□□□□□ -2.09
KAR5	YMR065W	YNR077C	P53758	84 aa		2.01	□□□□□ -2.09
KAR5	YMR065W	RPL13A	Q12690	199 aa	Predicted RBP	2.01	□□□□□ -2.09
KAR5	YMR065W	ADF1	Q2V2Q1	113 aa		2.01	□□□□□ -2.09
KAR5	YMR065W	JIP3	O13555	125 aa		2	□□□□□ -2.09
KAR5	YMR065W	RAD51	P25454	400 aa		2	□□□□□ -2.09
KAR5	YMR065W	TCA17	P32613	152 aa		2	□□□□□ -2.09
KAR5	YMR065W	GVP36	P40531	326 aa	Known RBP	2	□□□□□ -2.09
KAR5	YMR065W	IRC18	P47056	224 aa		2	□□□□□ -2.09
KAR5	YMR065W	MZM1	Q03429	123 aa	Predicted RBP	2	□□□□□ -2.09
KAR5	YMR065W	ATG38	Q05789	226 aa	Known RBP	2	□□□□□ -2.09
KAR5	YMR065W	YLR422W	Q06409	1932 aa		1.99	□□□□□ -2.09
KAR5	YMR065W	PRP18	P33411	251 aa	Predicted RBP	1.99	□□□□□ -2.09
KAR5	YMR065W	TMA19	P35691	167 aa	Known RBP	1.99	□□□□□ -2.09
KAR5	YMR065W	AST2	P39945	430 aa	Known RBP	1.99	□□□□□ -2.09
KAR5	YMR065W	GLE2	P40066	365 aa		1.99	□□□□□ -2.09
KAR5	YMR065W	YNL194C	P40169	301 aa		1.99	□□□□□ -2.09
KAR5	YMR065W	RAD17	P48581	401 aa		1.99	□□□□□ -2.09
KAR5	YMR065W	MGA1	P53050	456 aa		1.99	□□□□□ -2.09
KAR5	YMR065W	NUP49	Q02199	472 aa		1.99	□□□□□ -2.09
KAR5	YMR065W	PRP8	P33334	2413 aa	Known RBP	1.99	□□□□□ -2.09
KAR5	YMR065W	RPL2A	P0CX45	254 aa	Known RBP	1.98	□□□□□ -2.09
KAR5	YMR065W	RPL2B	P0CX46	254 aa	Known RBP	1.98	□□□□□ -2.09
KAR5	YMR065W	RPB4	P20433	221 aa	Predicted RBP	1.98	□□□□□ -2.09
KAR5	YMR065W	SEC17	P32602	292 aa		1.98	□□□□□ -2.09
KAR5	YMR065W	YKT6	P36015	200 aa	Known RBP	1.98	□□□□□ -2.09
KAR5	YMR065W	UTP30	P36144	274 aa	Known RBP	1.98	□□□□□ -2.09
KAR5	YMR065W	PDR17	P53844	350 aa		1.98	□□□□□ -2.09
KAR5	YMR065W	MCP1	Q12106	302 aa		1.98	□□□□□ -2.09
KAR5	YMR065W	UTP20	P35194	2493 aa	Known RBP	1.98	□□□□□ -2.09
KAR5	YMR065W	MGM101	P32787	269 aa	Known RBP	1.97	□□□□□ -2.09
KAR5	YMR065W	PTM1	P32857	523 aa		1.97	□□□□□ -2.09
KAR5	YMR065W	YPL162C	Q12042	273 aa		1.97	□□□□□ -2.09
KAR5	YMR065W	GPA2	P10823	449 aa		1.96	□□□□□ -2.09
KAR5	YMR065W	URA5	P13298	226 aa	Known RBP	1.96	□□□□□ -2.09
KAR5	YMR065W	KSS1	P14681	368 aa		1.96	□□□□□ -2.09
KAR5	YMR065W	MER1	P16523	270 aa		1.96	□□□□□ -2.09
KAR5	YMR065W	BET1	P22804	142 aa		1.96	□□□□□ -2.09
KAR5	YMR065W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	1.96	□□□□□ -2.09	not detected
KAR5	YMR065W	ARC19	P33204	171 aa	Known RBP	1.96	□□□□□ -2.09
KAR5	YMR065W	ANT1	Q06497	328 aa		1.96	□□□□□ -2.09
KAR5	YMR065W	GPM2	Q12008	311 aa		1.96	□□□□□ -2.09
KAR5	YMR065W	FSF1	Q12029	327 aa	Known RBP	1.96	□□□□□ -2.09
KAR5	YMR065W	YHR214C-E	Q8TGK0	99 aa		1.96	□□□□□ -2.09
KAR5	YMR065W	TFC1	P32367	649 aa		1.96	□□□□□ -2.1
KAR5	YMR065W	ASF2	P32448	525 aa	Predicted RBP	1.96	□□□□□ -2.1
KAR5	YMR065W	PRX1	P34227	261 aa	Known RBP	1.96	□□□□□ -2.1
KAR5	YMR065W	UPS2	P35200	230 aa		1.96	□□□□□ -2.1
KAR5	YMR065W	YBR209W	P38311	105 aa		1.96	□□□□□ -2.1
KAR5	YMR065W	SIP3	P38717	1229 aa		1.96	□□□□□ -2.1
KAR5	YMR065W	YMR321C	Q04898	105 aa		1.96	□□□□□ -2.1

Retrieved 100 of 5,963 RNA–protein pairs in 66.5 ms