RNA–Protein interactions for RNA: YLR351C

NIT3, Transcript of Nit protein, yeastyeast

Gene NIT3, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIT3YLR351C TPO4Q12256 659 aa2.7□□□□□ -1.98
NIT3YLR351C TEL1P38110 2787 aa2.69□□□□□ -1.98
NIT3YLR351C THP2O13539 261 aaKnown RBP2.69□□□□□ -1.98
NIT3YLR351C CUP1-1P0CX80 61 aa2.69□□□□□ -1.98
NIT3YLR351C CUP1-2P0CX81 61 aa2.69□□□□□ -1.98
NIT3YLR351C YCR102CP25608 368 aa2.69□□□□□ -1.98
NIT3YLR351C SEC17P32602 292 aa2.69□□□□□ -1.98
NIT3YLR351C RIB1P38066 345 aa2.69□□□□□ -1.98
NIT3YLR351C COS8P38723 381 aa2.69□□□□□ -1.98
NIT3YLR351C HPM1P40481 377 aa2.69□□□□□ -1.98
NIT3YLR351C MRPL49P40858 161 aaPredicted RBP2.69□□□□□ -1.98
NIT3YLR351C TMA22P47089 198 aaPredicted RBP2.69□□□□□ -1.98
NIT3YLR351C NCE101Q02820 53 aa2.69□□□□□ -1.98
NIT3YLR351C SPC2Q04969 178 aa2.69□□□□□ -1.98
NIT3YLR351C DCR2Q05924 578 aa2.69□□□□□ -1.98
NIT3YLR351C ADF1Q2V2Q1 113 aa2.69□□□□□ -1.98
NIT3YLR351C CDC39P25655 2108 aaKnown RBP2.69□□□□□ -1.98
NIT3YLR351C TOR1P35169 2470 aa2.68□□□□□ -1.98
NIT3YLR351C MER1P16523 270 aa2.68□□□□□ -1.98
NIT3YLR351C SNF6P18888 332 aa2.68□□□□□ -1.98
NIT3YLR351C YCR016WP25617 290 aaKnown RBP2.68□□□□□ -1.98
NIT3YLR351C LHP1P33399 275 aaKnown RBP2.68□□□□□ -1.98
NIT3YLR351C YKL075CP36083 450 aa2.68□□□□□ -1.98
NIT3YLR351C VPS51P36116 164 aa2.68□□□□□ -1.98
NIT3YLR351C YGL235WP53071 178 aa2.68□□□□□ -1.98
NIT3YLR351C CGI121Q03705 181 aaKnown RBP2.68□□□□□ -1.98
NIT3YLR351C YLR283WQ05867 314 aa2.68□□□□□ -1.98
NIT3YLR351C YLR179CQ06252 201 aaKnown RBP2.68□□□□□ -1.98
NIT3YLR351C GPI11Q06636 219 aa2.68□□□□□ -1.98
NIT3YLR351C YLR036CQ07986 203 aa2.68□□□□□ -1.98
NIT3YLR351C YOR214CQ12282 236 aa2.68□□□□□ -1.98
NIT3YLR351C IPP1P00817 287 aaKnown RBP2.67□□□□□ -1.98
NIT3YLR351C ASF2P32448 525 aaPredicted RBP2.67□□□□□ -1.98
NIT3YLR351C PDX3P38075 228 aaKnown RBP2.67□□□□□ -1.98
NIT3YLR351C FES1P38260 290 aa2.67□□□□□ -1.98
NIT3YLR351C MPM1P40364 252 aa2.67□□□□□ -1.98
NIT3YLR351C NUP57P48837 541 aa2.67□□□□□ -1.98
NIT3YLR351C MPC1P53157 130 aaKnown RBP2.67□□□□□ -1.98
NIT3YLR351C COS6P53344 381 aa2.67□□□□□ -1.98
NIT3YLR351C SWP1Q02795 286 aa2.67□□□□□ -1.98
NIT3YLR351C YDR249CQ03787 373 aa2.67□□□□□ -1.98
NIT3YLR351C RNH202Q05635 350 aa2.67□□□□□ -1.98
NIT3YLR351C SEI1Q06058 285 aa2.67□□□□□ -1.98
NIT3YLR351C GRE1Q08969 168 aa2.67□□□□□ -1.98
NIT3YLR351C MCP1Q12106 302 aa2.67□□□□□ -1.98
NIT3YLR351C YOR342CQ12182 319 aa2.67□□□□□ -1.98
NIT3YLR351C PSF1Q12488 208 aa2.67□□□□□ -1.98
NIT3YLR351C RIB3Q99258 208 aa2.67□□□□□ -1.98
NIT3YLR351C BLM10P43583 2143 aa2.66□□□□□ -1.98
NIT3YLR351C YSF3P0C074 85 aaPredicted RBP2.66□□□□□ -1.98
NIT3YLR351C IDH1P28834 360 aaKnown RBP RIP-Chip data2.66□□□□□ -1.98not detected
NIT3YLR351C SCM4P32564 187 aa2.66□□□□□ -1.98
NIT3YLR351C SOK1P40317 901 aa2.66□□□□□ -1.98
NIT3YLR351C MNN5P46982 586 aa2.66□□□□□ -1.98
NIT3YLR351C MPA43P53583 542 aaPredicted RBP2.66□□□□□ -1.98
NIT3YLR351C YNL046WP53956 172 aa2.66□□□□□ -1.98
NIT3YLR351C BRX1Q08235 291 aaKnown RBP2.66□□□□□ -1.98
NIT3YLR351C YPL225WQ08971 146 aaKnown RBP2.66□□□□□ -1.98
NIT3YLR351C BBP1Q12365 385 aa2.66□□□□□ -1.98
NIT3YLR351C YBR056W-AI2HB52 66 aa2.65□□□□□ -1.99
NIT3YLR351C MSN4P33749 630 aa2.65□□□□□ -1.99
NIT3YLR351C NUF2P33895 451 aa2.65□□□□□ -1.99
NIT3YLR351C NSG1P38837 291 aa2.65□□□□□ -1.99
NIT3YLR351C ARC15P40518 154 aaRIP-Chip data2.65□□□□□ -1.99not detected
NIT3YLR351C ILM1P47155 203 aa2.65□□□□□ -1.99
NIT3YLR351C YPR127WQ06494 345 aa2.65□□□□□ -1.99
NIT3YLR351C CDC36P06100 191 aaPredicted RBP2.64□□□□□ -1.99
NIT3YLR351C NTG1P31378 399 aa2.64□□□□□ -1.99
NIT3YLR351C ERG24P32462 438 aaKnown RBP2.64□□□□□ -1.99
NIT3YLR351C HSP150P32478 413 aa2.64□□□□□ -1.99
NIT3YLR351C MSA2P36157 363 aa2.64□□□□□ -1.99
NIT3YLR351C CUE1P38428 203 aa2.64□□□□□ -1.99
NIT3YLR351C FAR7P43592 221 aa2.64□□□□□ -1.99
NIT3YLR351C BAT2P47176 376 aaKnown RBP2.64□□□□□ -1.99
NIT3YLR351C RMR1P53060 241 aa2.64□□□□□ -1.99
NIT3YLR351C YGL159WP53110 370 aa2.64□□□□□ -1.99
NIT3YLR351C YGL101WP53144 215 aa2.64□□□□□ -1.99
NIT3YLR351C MEU1Q07938 337 aaKnown RBP RIP-Chip data2.64□□□□□ -1.99not detected
NIT3YLR351C YOR283WQ12040 230 aaKnown RBP2.64□□□□□ -1.99
NIT3YLR351C MDM32Q12171 622 aa2.64□□□□□ -1.99
NIT3YLR351C YLR126CQ12288 251 aa2.64□□□□□ -1.99
NIT3YLR351C Q0255P03881 472 aa2.63□□□□□ -1.99
NIT3YLR351C YHR214C-DP0CX93 97 aa2.63□□□□□ -1.99
NIT3YLR351C SNF4P12904 322 aa2.63□□□□□ -1.99
NIT3YLR351C PET9P18239 318 aaKnown RBP2.63□□□□□ -1.99
NIT3YLR351C ERD2P18414 219 aa2.63□□□□□ -1.99
NIT3YLR351C SCO1P23833 295 aa2.63□□□□□ -1.99
NIT3YLR351C YER085CP40058 173 aa2.63□□□□□ -1.99
NIT3YLR351C YMR144WP40214 342 aaKnown RBP2.63□□□□□ -1.99
NIT3YLR351C PHB1P40961 287 aa2.63□□□□□ -1.99
NIT3YLR351C VMA10P48836 114 aaKnown RBP2.63□□□□□ -1.99
NIT3YLR351C YMR279CQ03263 540 aa2.63□□□□□ -1.99
NIT3YLR351C YPL257WQ08974 193 aa2.63□□□□□ -1.99
NIT3YLR351C EMC6Q12431 108 aa2.63□□□□□ -1.99
NIT3YLR351C TRA1P38811 3744 aa2.62□□□□□ -1.99
NIT3YLR351C GCN1P33892 2672 aaKnown RBP2.62□□□□□ -1.99
NIT3YLR351C FBA1P14540 359 aaKnown RBP2.62□□□□□ -1.99
NIT3YLR351C RPS5P26783 225 aaKnown RBP2.62□□□□□ -1.99
NIT3YLR351C TIM12P32830 109 aa2.62□□□□□ -1.99
NIT3YLR351C GRE3P38715 327 aaKnown RBP RIP-Chip data2.62□□□□□ -1.99not detected
Retrieved 100 of 5,963 RNA–protein pairs in 23.9 ms